RNA–Protein interactions for RNA: ENST00000550444.1

HCFC2-205, Transcript of host cell factor C2, humanhuman

TSL 4

Gene HCFC2, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-205ENST00000550444 CEMIPQ8WUJ3 1361 aa22.98■■□□□ 1.27
HCFC2-205ENST00000550444 CCDC88AQ3V6T2 1871 aa22.98■■□□□ 1.27
HCFC2-205ENST00000550444 ANKRD31Q8N7Z5 1873 aa22.97■■□□□ 1.27
HCFC2-205ENST00000550444 PRAMEF22A3QJZ6 481 aa22.97■■□□□ 1.27
HCFC2-205ENST00000550444 NBPF5PQ86XG9 351 aaPredicted RBP22.97■■□□□ 1.27
HCFC2-205ENST00000550444 RTF1Q92541 710 aaKnown RBP22.97■■□□□ 1.27
HCFC2-205ENST00000550444 LTBP3Q9NS15 1303 aa22.97■■□□□ 1.27
HCFC2-205ENST00000550444 NPC1L1Q9UHC9 1359 aa22.97■■□□□ 1.27
HCFC2-205ENST00000550444 SOGA3Q5TF21 947 aa22.96■■□□□ 1.27
HCFC2-205ENST00000550444 CHADLQ6NUI6 762 aa22.96■■□□□ 1.27
HCFC2-205ENST00000550444 RSPH6AQ9H0K4 717 aa22.96■■□□□ 1.27
HCFC2-205ENST00000550444 POTEIP0CG38 1075 aa22.95■■□□□ 1.26
HCFC2-205ENST00000550444 POTEJP0CG39 1038 aa22.95■■□□□ 1.26
HCFC2-205ENST00000550444 SCN7AQ01118 1682 aa22.95■■□□□ 1.26
HCFC2-205ENST00000550444 MCM10Q7L590 875 aa22.95■■□□□ 1.26
HCFC2-205ENST00000550444 NUDCQ9Y266 331 aa22.95■■□□□ 1.26
HCFC2-205ENST00000550444 SNRPA1P09661 255 aaKnown RBP22.94■■□□□ 1.26
HCFC2-205ENST00000550444 U2AF1L5P0DN76 240 aaPredicted RBP22.94■■□□□ 1.26
HCFC2-205ENST00000550444 U2AF1Q01081 240 aaKnown RBP eCLIP22.94■■□□□ 1.26
HCFC2-205ENST00000550444 MKRN1Q9UHC7 482 aaKnown RBP22.94■■□□□ 1.26
HCFC2-205ENST00000550444 ZNF652Q9Y2D9 606 aa22.94■■□□□ 1.26
HCFC2-205ENST00000550444 FAM177BA6PVY3 158 aa22.93■■□□□ 1.26
HCFC2-205ENST00000550444 CLEC4GQ6UXB4 293 aa22.93■■□□□ 1.26
HCFC2-205ENST00000550444 COL11A2P13942 1736 aaPredicted RBP22.93■■□□□ 1.26
HCFC2-205ENST00000550444 DCTN1Q14203 1278 aa22.92■■□□□ 1.26
HCFC2-205ENST00000550444 NPR1P16066 1061 aa22.91■■□□□ 1.26
HCFC2-205ENST00000550444 CCDC93Q567U6 631 aa22.91■■□□□ 1.26
HCFC2-205ENST00000550444 CREBZFQ9NS37 354 aa22.91■■□□□ 1.26
HCFC2-205ENST00000550444 NIP7Q9Y221 180 aaKnown RBP eCLIP22.91■■□□□ 1.26
HCFC2-205ENST00000550444 SIPA1L3O60292 1781 aaPredicted RBP22.91■■□□□ 1.26
HCFC2-205ENST00000550444 SLX4Q8IY92 1834 aa22.9■■□□□ 1.26
HCFC2-205ENST00000550444 TPTE2Q6XPS3 522 aa22.9■■□□□ 1.26
HCFC2-205ENST00000550444 C7orf43Q8WVR3 580 aa22.9■■□□□ 1.26
HCFC2-205ENST00000550444 FER1L6Q2WGJ9 1857 aa22.9■■□□□ 1.26
HCFC2-205ENST00000550444 ZNF277Q9NRM2 450 aaPredicted RBP22.89■■□□□ 1.25
HCFC2-205ENST00000550444 IQCA1LA6NCM1 817 aa22.88■■□□□ 1.25
HCFC2-205ENST00000550444 NBPF26B4DH59 902 aa22.88■■□□□ 1.25
HCFC2-205ENST00000550444 NBPF10Q6P3W6 841 aaKnown RBP22.88■■□□□ 1.25
HCFC2-205ENST00000550444 OLFM4Q6UX06 510 aa22.88■■□□□ 1.25
HCFC2-205ENST00000550444 NBPF15Q8N660 670 aa22.88■■□□□ 1.25
HCFC2-205ENST00000550444 GTF2E1P29083 439 aaPredicted RBP22.87■■□□□ 1.25
HCFC2-205ENST00000550444 EAPPQ56P03 285 aaPredicted RBP22.87■■□□□ 1.25
HCFC2-205ENST00000550444 TAF1DQ9H5J8 278 aaPredicted RBP22.87■■□□□ 1.25
HCFC2-205ENST00000550444 PCNTO95613 3336 aa22.87■■□□□ 1.25
HCFC2-205ENST00000550444 FKBP4Q02790 459 aaKnown RBP eCLIP22.86■■□□□ 1.25
HCFC2-205ENST00000550444 LDHDQ86WU2 507 aa22.86■■□□□ 1.25
HCFC2-205ENST00000550444 MIS18AQ9NYP9 233 aa22.86■■□□□ 1.25
HCFC2-205ENST00000550444 DICER1Q9UPY3 1922 aaKnown RBP22.85■■□□□ 1.25
HCFC2-205ENST00000550444 PPP2R1AP30153 589 aa22.85■■□□□ 1.25
HCFC2-205ENST00000550444 HLFQ16534 295 aa22.85■■□□□ 1.25
HCFC2-205ENST00000550444 NGEFQ8N5V2 710 aa22.85■■□□□ 1.25
HCFC2-205ENST00000550444 CLEC11AQ9Y240 323 aa22.85■■□□□ 1.25
HCFC2-205ENST00000550444 ZNF541Q9H0D2 1346 aa22.84■■□□□ 1.25
HCFC2-205ENST00000550444 KLRG2A4D1S0 409 aaPredicted RBP22.84■■□□□ 1.25
HCFC2-205ENST00000550444 TAF7Q15545 349 aaPredicted RBP22.84■■□□□ 1.25
HCFC2-205ENST00000550444 RTKN2Q8IZC4 609 aa22.84■■□□□ 1.25
HCFC2-205ENST00000550444 L3MBTL3Q96JM7 780 aaPredicted RBP22.84■■□□□ 1.25
HCFC2-205ENST00000550444 HTATSF1O43719 755 aaKnown RBP22.83■■□□□ 1.25
HCFC2-205ENST00000550444 BCORQ6W2J9 1755 aa22.83■■□□□ 1.24
HCFC2-205ENST00000550444 CACNA1SQ13698 1873 aa22.83■■□□□ 1.24
HCFC2-205ENST00000550444 ALDH1B1P30837 517 aa22.82■■□□□ 1.24
HCFC2-205ENST00000550444 SYNE4Q8N205 404 aa22.82■■□□□ 1.24
HCFC2-205ENST00000550444 HACL1Q9UJ83 578 aa22.82■■□□□ 1.24
HCFC2-205ENST00000550444 PASKQ96RG2 1323 aa22.81■■□□□ 1.24
HCFC2-205ENST00000550444 EPHX2P34913 555 aa22.8■■□□□ 1.24
HCFC2-205ENST00000550444 IARSP41252 1262 aaKnown RBP22.8■■□□□ 1.24
HCFC2-205ENST00000550444 CNTNAP1P78357 1384 aa22.79■■□□□ 1.24
HCFC2-205ENST00000550444 TMEM88BA6NKF7 163 aa22.79■■□□□ 1.24
HCFC2-205ENST00000550444 RGL2O15211 777 aa22.79■■□□□ 1.24
HCFC2-205ENST00000550444 FOXN1O15353 648 aa22.79■■□□□ 1.24
HCFC2-205ENST00000550444 NUTM1Q86Y26 1132 aa22.79■■□□□ 1.24
HCFC2-205ENST00000550444 ITGBL1O95965 494 aaPredicted RBP22.78■■□□□ 1.24
HCFC2-205ENST00000550444 RRP7AQ9Y3A4 280 aaKnown RBP22.78■■□□□ 1.24
HCFC2-205ENST00000550444 RNF123Q5XPI4 1314 aa22.78■■□□□ 1.24
HCFC2-205ENST00000550444 NEFMP07197 916 aa22.77■■□□□ 1.24
HCFC2-205ENST00000550444 VEGFBP49765 207 aa22.77■■□□□ 1.24
HCFC2-205ENST00000550444 NYXQ9GZU5 481 aa22.77■■□□□ 1.24
HCFC2-205ENST00000550444 ARFGEF2Q9Y6D5 1785 aa22.76■■□□□ 1.23
HCFC2-205ENST00000550444 FZD9O00144 591 aa22.76■■□□□ 1.23
HCFC2-205ENST00000550444 JDP2Q8WYK2 163 aa22.76■■□□□ 1.23
HCFC2-205ENST00000550444 AIDAQ96BJ3 306 aa22.76■■□□□ 1.23
HCFC2-205ENST00000550444 MYL6BP14649 208 aa22.75■■□□□ 1.23
HCFC2-205ENST00000550444 GPTP24298 496 aa22.75■■□□□ 1.23
HCFC2-205ENST00000550444 MAP1SQ66K74 1059 aaPredicted RBP22.75■■□□□ 1.23
HCFC2-205ENST00000550444 KIF6Q6ZMV9 814 aa22.75■■□□□ 1.23
HCFC2-205ENST00000550444 PNMA8AQ86V59 439 aaPredicted RBP22.75■■□□□ 1.23
HCFC2-205ENST00000550444 CNTROBQ8N137 903 aa22.75■■□□□ 1.23
HCFC2-205ENST00000550444 GJA3Q9Y6H8 435 aa22.75■■□□□ 1.23
HCFC2-205ENST00000550444 ERVV-1B6SEH8 477 aa22.74■■□□□ 1.23
HCFC2-205ENST00000550444 TCERG1O14776 1098 aaKnown RBP22.74■■□□□ 1.23
HCFC2-205ENST00000550444 TTLL7Q6ZT98 887 aa22.74■■□□□ 1.23
HCFC2-205ENST00000550444 PNISRQ8TF01 805 aaKnown RBP22.74■■□□□ 1.23
HCFC2-205ENST00000550444 RPGRQ92834 1020 aaKnown RBP22.74■■□□□ 1.23
HCFC2-205ENST00000550444 ABCC12Q96J65 1359 aa22.74■■□□□ 1.23
HCFC2-205ENST00000550444 EIF6P56537 245 aaKnown RBP22.73■■□□□ 1.23
HCFC2-205ENST00000550444 CRY2Q49AN0 593 aa22.73■■□□□ 1.23
HCFC2-205ENST00000550444 GPC2Q8N158 579 aa22.73■■□□□ 1.23
HCFC2-205ENST00000550444 ZBTB3Q9H5J0 574 aa22.73■■□□□ 1.23
HCFC2-205ENST00000550444 MAP3K15Q6ZN16 1313 aa22.73■■□□□ 1.23
HCFC2-205ENST00000550444 CTCFP49711 727 aaPredicted RBP22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms