RNA–Protein interactions for RNA: ENST00000550391.5

CACNB3-216, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-216ENST00000550391 DZIP1LQ8IYY4 767 aaKnown RBP17.95■□□□□ 0.46
CACNB3-216ENST00000550391 SLC16A10Q8TF71 515 aa17.95■□□□□ 0.46
CACNB3-216ENST00000550391 TAF1LQ8IZX4 1826 aa17.95■□□□□ 0.46
CACNB3-216ENST00000550391 FTSJ3Q8IY81 847 aaKnown RBP17.94■□□□□ 0.46
CACNB3-216ENST00000550391 KLHL34Q8N239 644 aa17.94■□□□□ 0.46
CACNB3-216ENST00000550391 CLUAP1Q96AJ1 413 aa17.94■□□□□ 0.46
CACNB3-216ENST00000550391 CCNL1Q9UK58 526 aaPredicted RBP17.94■□□□□ 0.46
CACNB3-216ENST00000550391 ABCC4O15439 1325 aa17.94■□□□□ 0.46
CACNB3-216ENST00000550391 RLBP1P12271 317 aa17.93■□□□□ 0.46
CACNB3-216ENST00000550391 FKBP5Q13451 457 aaPredicted RBP17.93■□□□□ 0.46
CACNB3-216ENST00000550391 LINC00116Q8NCU8 138 aa17.93■□□□□ 0.46
CACNB3-216ENST00000550391 PANK1Q8TE04 598 aa17.93■□□□□ 0.46
CACNB3-216ENST00000550391 CRKLP46109 303 aaKnown RBP17.92■□□□□ 0.46
CACNB3-216ENST00000550391 KCNQ4P56696 695 aa17.92■□□□□ 0.46
CACNB3-216ENST00000550391 COL13A1Q5TAT6 717 aaPredicted RBP17.92■□□□□ 0.46
CACNB3-216ENST00000550391 ERICH6BQ5W0A0 696 aa17.92■□□□□ 0.46
CACNB3-216ENST00000550391 INTS5Q6P9B9 1019 aaKnown RBP17.92■□□□□ 0.46
CACNB3-216ENST00000550391 DNAJC5GQ8N7S2 189 aa17.92■□□□□ 0.46
CACNB3-216ENST00000550391 CCDC87Q9NVE4 849 aa17.92■□□□□ 0.46
CACNB3-216ENST00000550391 ZBTB1Q9Y2K1 713 aa17.92■□□□□ 0.46
CACNB3-216ENST00000550391 GTF3C3Q9Y5Q9 886 aa17.92■□□□□ 0.46
CACNB3-216ENST00000550391 MYH14Q7Z406 1995 aaKnown RBP17.91■□□□□ 0.46
CACNB3-216ENST00000550391 SLC27A3Q5K4L6 730 aa17.91■□□□□ 0.46
CACNB3-216ENST00000550391 COPS6Q7L5N1 327 aa17.91■□□□□ 0.46
CACNB3-216ENST00000550391 XAGE3Q8WTP9 111 aa17.91■□□□□ 0.46
CACNB3-216ENST00000550391 CRBNQ96SW2 442 aa17.91■□□□□ 0.46
CACNB3-216ENST00000550391 CNTNAP4Q9C0A0 1308 aa17.91■□□□□ 0.46
CACNB3-216ENST00000550391 N4BP2Q86UW6 1770 aaPredicted RBP17.9■□□□□ 0.46
CACNB3-216ENST00000550391 DDX58O95786 925 aaKnown RBP17.9■□□□□ 0.46
CACNB3-216ENST00000550391 TNS4Q8IZW8 715 aa17.9■□□□□ 0.46
CACNB3-216ENST00000550391 LRRC4BQ9NT99 713 aa17.9■□□□□ 0.46
CACNB3-216ENST00000550391 PCDH10Q9P2E7 1040 aa17.9■□□□□ 0.46
CACNB3-216ENST00000550391 ADCY9O60503 1353 aa17.9■□□□□ 0.46
CACNB3-216ENST00000550391 C4BP0C0L5 1744 aa17.89■□□□□ 0.46
CACNB3-216ENST00000550391 PXDNLA1KZ92 1463 aa17.89■□□□□ 0.45
CACNB3-216ENST00000550391 F6X3S4 739 aa17.89■□□□□ 0.45
CACNB3-216ENST00000550391 IL6STP40189 918 aaPredicted RBP17.89■□□□□ 0.45
CACNB3-216ENST00000550391 AIMP1Q12904 312 aaKnown RBP17.89■□□□□ 0.45
CACNB3-216ENST00000550391 RC3H1Q5TC82 1133 aaKnown RBP17.89■□□□□ 0.45
CACNB3-216ENST00000550391 KSR2Q6VAB6 950 aa17.89■□□□□ 0.45
CACNB3-216ENST00000550391 TMEM57Q8N5G2 664 aa17.89■□□□□ 0.45
CACNB3-216ENST00000550391 COG6Q9Y2V7 657 aa17.89■□□□□ 0.45
CACNB3-216ENST00000550391 PI4KAP2A4QPH2 592 aa17.88■□□□□ 0.45
CACNB3-216ENST00000550391 YBX3P16989 372 aaKnown RBP eCLIP17.88■□□□□ 0.45
CACNB3-216ENST00000550391 MVPQ14764 893 aaKnown RBP17.88■□□□□ 0.45
CACNB3-216ENST00000550391 INTS3Q68E01 1043 aaKnown RBP17.88■□□□□ 0.45
CACNB3-216ENST00000550391 PI4KAP1Q8N8J0 262 aa17.88■□□□□ 0.45
CACNB3-216ENST00000550391 EXOC6Q8TAG9 804 aa17.88■□□□□ 0.45
CACNB3-216ENST00000550391 ARFGEF2Q9Y6D5 1785 aa17.87■□□□□ 0.45
CACNB3-216ENST00000550391 HMGB2P26583 209 aaKnown RBP17.87■□□□□ 0.45
CACNB3-216ENST00000550391 EIF5P55010 431 aaKnown RBP17.87■□□□□ 0.45
CACNB3-216ENST00000550391 TTLL7Q6ZT98 887 aa17.87■□□□□ 0.45
CACNB3-216ENST00000550391 NLGN2Q8NFZ4 835 aa17.87■□□□□ 0.45
CACNB3-216ENST00000550391 DNAAF4Q8WXU2 420 aa17.87■□□□□ 0.45
CACNB3-216ENST00000550391 ANKRD13DQ6ZTN6 518 aa17.86■□□□□ 0.45
CACNB3-216ENST00000550391 ITPRIPQ8IWB1 547 aa17.86■□□□□ 0.45
CACNB3-216ENST00000550391 PLBD2Q8NHP8 589 aa17.86■□□□□ 0.45
CACNB3-216ENST00000550391 MAP3K2Q9Y2U5 619 aa17.86■□□□□ 0.45
CACNB3-216ENST00000550391 CCT4P50991 539 aaKnown RBP17.85■□□□□ 0.45
CACNB3-216ENST00000550391 SLC4A10Q6U841 1118 aa17.85■□□□□ 0.45
CACNB3-216ENST00000550391 RIC3Q7Z5B4 369 aa17.85■□□□□ 0.45
CACNB3-216ENST00000550391 ZNF330Q9Y3S2 320 aaPredicted RBP17.85■□□□□ 0.45
CACNB3-216ENST00000550391 COL24A1Q17RW2 1714 aa17.84■□□□□ 0.45
CACNB3-216ENST00000550391 RPS6KA4O75676 772 aa17.84■□□□□ 0.45
CACNB3-216ENST00000550391 NPM2Q86SE8 214 aaKnown RBP17.84■□□□□ 0.45
CACNB3-216ENST00000550391 ZNF526Q8TF50 670 aaPredicted RBP17.84■□□□□ 0.45
CACNB3-216ENST00000550391 CHMP4BQ9H444 224 aaKnown RBP17.84■□□□□ 0.45
CACNB3-216ENST00000550391 DDX19BQ9UMR2 479 aa17.84■□□□□ 0.45
CACNB3-216ENST00000550391 AAMPQ13685 434 aa17.83■□□□□ 0.44
CACNB3-216ENST00000550391 BEND3Q5T5X7 828 aa17.83■□□□□ 0.44
CACNB3-216ENST00000550391 METTL22Q9BUU2 404 aaPredicted RBP17.83■□□□□ 0.44
CACNB3-216ENST00000550391 COL15A1P39059 1388 aa17.82■□□□□ 0.44
CACNB3-216ENST00000550391 MAP3K15Q6ZN16 1313 aa17.82■□□□□ 0.44
CACNB3-216ENST00000550391 KIF6Q6ZMV9 814 aa17.82■□□□□ 0.44
CACNB3-216ENST00000550391 UBR3Q6ZT12 1888 aa17.82■□□□□ 0.44
CACNB3-216ENST00000550391 QSER1Q2KHR3 1735 aa17.81■□□□□ 0.44
CACNB3-216ENST00000550391 KIF3CO14782 793 aa17.81■□□□□ 0.44
CACNB3-216ENST00000550391 ZBTB7BO15156 539 aaPredicted RBP17.81■□□□□ 0.44
CACNB3-216ENST00000550391 GNPATO15228 680 aa17.81■□□□□ 0.44
CACNB3-216ENST00000550391 ZNF827Q17R98 1081 aa17.81■□□□□ 0.44
CACNB3-216ENST00000550391 DZIP3Q86Y13 1208 aaKnown RBP17.81■□□□□ 0.44
CACNB3-216ENST00000550391 SRCIN1Q9C0H9 1055 aa17.81■□□□□ 0.44
CACNB3-216ENST00000550391 ZBTB3Q9H5J0 574 aa17.81■□□□□ 0.44
CACNB3-216ENST00000550391 BCORQ6W2J9 1755 aa17.81■□□□□ 0.44
CACNB3-216ENST00000550391 A0A087WZG4 1122 aa17.8■□□□□ 0.44
CACNB3-216ENST00000550391 ERVV-1B6SEH8 477 aa17.8■□□□□ 0.44
CACNB3-216ENST00000550391 JMYQ8N9B5 988 aa17.8■□□□□ 0.44
CACNB3-216ENST00000550391 LINS1Q8NG48 757 aa17.8■□□□□ 0.44
CACNB3-216ENST00000550391 AK7Q96M32 723 aa17.8■□□□□ 0.44
CACNB3-216ENST00000550391 TBC1D2BQ9UPU7 963 aa17.8■□□□□ 0.44
CACNB3-216ENST00000550391 RTCBQ9Y3I0 505 aaKnown RBP17.8■□□□□ 0.44
CACNB3-216ENST00000550391 IBTKQ9P2D0 1353 aaPredicted RBP17.79■□□□□ 0.44
CACNB3-216ENST00000550391 ALDH1L1O75891 902 aa17.79■□□□□ 0.44
CACNB3-216ENST00000550391 IGKV5-2P06315 115 aa17.79■□□□□ 0.44
CACNB3-216ENST00000550391 NEXNQ0ZGT2 675 aa17.79■□□□□ 0.44
CACNB3-216ENST00000550391 AMIGO3Q86WK7 504 aa17.79■□□□□ 0.44
CACNB3-216ENST00000550391 MYD88Q99836 296 aa17.79■□□□□ 0.44
CACNB3-216ENST00000550391 PPP4R2Q9NY27 417 aa17.79■□□□□ 0.44
CACNB3-216ENST00000550391 NUP98P52948 1817 aa17.79■□□□□ 0.44
CACNB3-216ENST00000550391 C4AP0C0L4 1744 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms