RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 TTLL7Q6ZT98 887 aa24.99■■□□□ 1.59
DDX54-207ENST00000550016 ZNF652Q9Y2D9 606 aa24.99■■□□□ 1.59
DDX54-207ENST00000550016 KIF13BQ9NQT8 1826 aa24.98■■□□□ 1.59
DDX54-207ENST00000550016 MAP3K15Q6ZN16 1313 aa24.98■■□□□ 1.59
DDX54-207ENST00000550016 ERVV-1B6SEH8 477 aa24.98■■□□□ 1.59
DDX54-207ENST00000550016 E9PSI1 815 aa24.98■■□□□ 1.59
DDX54-207ENST00000550016 EXOSC9Q06265 439 aaKnown RBP24.98■■□□□ 1.59
DDX54-207ENST00000550016 DDR1Q08345 913 aa24.98■■□□□ 1.59
DDX54-207ENST00000550016 CCDC30Q5VVM6 783 aa24.98■■□□□ 1.59
DDX54-207ENST00000550016 TBC1D9BQ66K14 1250 aa24.98■■□□□ 1.59
DDX54-207ENST00000550016 SYT17Q9BSW7 474 aa24.98■■□□□ 1.59
DDX54-207ENST00000550016 HYPKQ9NX55 129 aa24.98■■□□□ 1.59
DDX54-207ENST00000550016 POLRMTO00411 1230 aaKnown RBP24.97■■□□□ 1.59
DDX54-207ENST00000550016 KLHL34Q8N239 644 aa24.97■■□□□ 1.59
DDX54-207ENST00000550016 NRXN2Q9P2S2 1712 aa24.96■■□□□ 1.59
DDX54-207ENST00000550016 SLFN5Q08AF3 891 aa24.96■■□□□ 1.59
DDX54-207ENST00000550016 BICDL1Q6ZP65 573 aa24.96■■□□□ 1.59
DDX54-207ENST00000550016 COPS6Q7L5N1 327 aa24.96■■□□□ 1.59
DDX54-207ENST00000550016 CD2APQ9Y5K6 639 aa24.96■■□□□ 1.59
DDX54-207ENST00000550016 HLFQ16534 295 aa24.95■■□□□ 1.58
DDX54-207ENST00000550016 XAGE3Q8WTP9 111 aa24.95■■□□□ 1.58
DDX54-207ENST00000550016 SETDB2Q96T68 719 aa24.95■■□□□ 1.58
DDX54-207ENST00000550016 HNRNPUQ00839 825 aaKnown RBP eCLIP24.94■■□□□ 1.58
DDX54-207ENST00000550016 AIMP1Q12904 312 aaKnown RBP24.94■■□□□ 1.58
DDX54-207ENST00000550016 ZBTB3Q9H5J0 574 aa24.94■■□□□ 1.58
DDX54-207ENST00000550016 VAMP4O75379 141 aa24.93■■□□□ 1.58
DDX54-207ENST00000550016 SERPINB2P05120 415 aa24.93■■□□□ 1.58
DDX54-207ENST00000550016 CDCA7LQ96GN5 454 aa24.92■■□□□ 1.58
DDX54-207ENST00000550016 STK31Q9BXU1 1019 aa24.92■■□□□ 1.58
DDX54-207ENST00000550016 ANKRD36CQ5JPF3 1778 aa24.92■■□□□ 1.58
DDX54-207ENST00000550016 GIGYF2Q6Y7W6 1299 aaKnown RBP24.91■■□□□ 1.58
DDX54-207ENST00000550016 CARMIL3Q8ND23 1372 aa24.91■■□□□ 1.58
DDX54-207ENST00000550016 TRMT2AQ8IZ69 625 aaKnown RBP24.9■■□□□ 1.58
DDX54-207ENST00000550016 NIP7Q9Y221 180 aaKnown RBP eCLIP24.9■■□□□ 1.58
DDX54-207ENST00000550016 C10orf71Q711Q0 1435 aa24.89■■□□□ 1.58
DDX54-207ENST00000550016 N4BP2Q86UW6 1770 aaPredicted RBP24.88■■□□□ 1.57
DDX54-207ENST00000550016 TCERG1O14776 1098 aaKnown RBP24.88■■□□□ 1.57
DDX54-207ENST00000550016 ANKRD13DQ6ZTN6 518 aa24.88■■□□□ 1.57
DDX54-207ENST00000550016 NLGN2Q8NFZ4 835 aa24.88■■□□□ 1.57
DDX54-207ENST00000550016 PLBD2Q8NHP8 589 aa24.88■■□□□ 1.57
DDX54-207ENST00000550016 PHAXQ9H814 394 aaKnown RBP24.88■■□□□ 1.57
DDX54-207ENST00000550016 ARFGEF2Q9Y6D5 1785 aa24.88■■□□□ 1.57
DDX54-207ENST00000550016 ATP10DQ9P241 1426 aa24.87■■□□□ 1.57
DDX54-207ENST00000550016 KIAA1551Q9HCM1 1747 aa24.86■■□□□ 1.57
DDX54-207ENST00000550016 SLC4A2P04920 1241 aa24.86■■□□□ 1.57
DDX54-207ENST00000550016 TGFB2P61812 414 aa24.85■■□□□ 1.57
DDX54-207ENST00000550016 HSP90AB3PQ58FF7 597 aa24.85■■□□□ 1.57
DDX54-207ENST00000550016 NBPF5PQ86XG9 351 aaPredicted RBP24.85■■□□□ 1.57
DDX54-207ENST00000550016 ZNF34Q8IZ26 560 aa24.85■■□□□ 1.57
DDX54-207ENST00000550016 ANKRD31Q8N7Z5 1873 aa24.85■■□□□ 1.57
DDX54-207ENST00000550016 NPHP1O15259 732 aa24.83■■□□□ 1.57
DDX54-207ENST00000550016 GPTP24298 496 aa24.83■■□□□ 1.57
DDX54-207ENST00000550016 TCIRG1Q13488 830 aa24.83■■□□□ 1.57
DDX54-207ENST00000550016 PRR5LQ6MZQ0 368 aa24.83■■□□□ 1.57
DDX54-207ENST00000550016 TPTE2Q6XPS3 522 aa24.83■■□□□ 1.57
DDX54-207ENST00000550016 CNBD1Q8NA66 436 aa24.83■■□□□ 1.57
DDX54-207ENST00000550016 DDX58O95786 925 aaKnown RBP24.82■■□□□ 1.56
DDX54-207ENST00000550016 RIC3Q7Z5B4 369 aa24.82■■□□□ 1.56
DDX54-207ENST00000550016 PARP10Q53GL7 1025 aa24.81■■□□□ 1.56
DDX54-207ENST00000550016 G2E3Q7L622 706 aa24.81■■□□□ 1.56
DDX54-207ENST00000550016 NYXQ9GZU5 481 aa24.81■■□□□ 1.56
DDX54-207ENST00000550016 ZBED9Q6R2W3 1325 aa24.81■■□□□ 1.56
DDX54-207ENST00000550016 UBN2Q6ZU65 1347 aa24.81■■□□□ 1.56
DDX54-207ENST00000550016 BRCA1P38398 1863 aaKnown RBP24.81■■□□□ 1.56
DDX54-207ENST00000550016 FAM177BA6PVY3 158 aa24.8■■□□□ 1.56
DDX54-207ENST00000550016 ST5P78524 1137 aa24.8■■□□□ 1.56
DDX54-207ENST00000550016 PXDNLA1KZ92 1463 aa24.8■■□□□ 1.56
DDX54-207ENST00000550016 A0A0G2JLW4 131 aa24.79■■□□□ 1.56
DDX54-207ENST00000550016 DCAF8L1A6NGE4 600 aa24.79■■□□□ 1.56
DDX54-207ENST00000550016 SUSD4Q5VX71 490 aa24.79■■□□□ 1.56
DDX54-207ENST00000550016 PPP1R42Q7Z4L9 355 aa24.79■■□□□ 1.56
DDX54-207ENST00000550016 CCDC24Q8N4L8 307 aa24.79■■□□□ 1.56
DDX54-207ENST00000550016 BRIP1Q9BX63 1249 aa24.79■■□□□ 1.56
DDX54-207ENST00000550016 DLEC1Q9Y238 1755 aa24.78■■□□□ 1.56
DDX54-207ENST00000550016 DPEP1P16444 411 aa24.78■■□□□ 1.56
DDX54-207ENST00000550016 GTF2E1P29083 439 aaPredicted RBP24.78■■□□□ 1.56
DDX54-207ENST00000550016 KSR2Q6VAB6 950 aa24.78■■□□□ 1.56
DDX54-207ENST00000550016 ZNF428Q96B54 188 aa24.78■■□□□ 1.56
DDX54-207ENST00000550016 IBTKQ9P2D0 1353 aaPredicted RBP24.78■■□□□ 1.56
DDX54-207ENST00000550016 CT47B1P0C2W7 299 aaPredicted RBP24.77■■□□□ 1.56
DDX54-207ENST00000550016 PDE6BP35913 854 aa24.77■■□□□ 1.56
DDX54-207ENST00000550016 FLIIQ13045 1269 aa24.77■■□□□ 1.56
DDX54-207ENST00000550016 NLRP10Q86W26 655 aa24.77■■□□□ 1.56
DDX54-207ENST00000550016 PI4KAP2A4QPH2 592 aa24.76■■□□□ 1.55
DDX54-207ENST00000550016 PI4KAP1Q8N8J0 262 aa24.76■■□□□ 1.55
DDX54-207ENST00000550016 ISCA1Q9BUE6 129 aa24.76■■□□□ 1.55
DDX54-207ENST00000550016 PDZRN3Q9UPQ7 1066 aa24.76■■□□□ 1.55
DDX54-207ENST00000550016 NTSR2O95665 410 aa24.75■■□□□ 1.55
DDX54-207ENST00000550016 KCNA3P22001 575 aa24.75■■□□□ 1.55
DDX54-207ENST00000550016 TRIM28Q13263 835 aaKnown RBP24.75■■□□□ 1.55
DDX54-207ENST00000550016 METTL22Q9BUU2 404 aaPredicted RBP24.75■■□□□ 1.55
DDX54-207ENST00000550016 UTP14AQ9BVJ6 771 aaKnown RBP24.75■■□□□ 1.55
DDX54-207ENST00000550016 MAP3K2Q9Y2U5 619 aa24.75■■□□□ 1.55
DDX54-207ENST00000550016 ATP5J2-PTCD1G3V325 749 aa24.74■■□□□ 1.55
DDX54-207ENST00000550016 CHRNA5P30532 468 aa24.74■■□□□ 1.55
DDX54-207ENST00000550016 FKBP5Q13451 457 aaPredicted RBP24.74■■□□□ 1.55
DDX54-207ENST00000550016 GPR162Q16538 588 aa24.74■■□□□ 1.55
DDX54-207ENST00000550016 NUTM1Q86Y26 1132 aa24.74■■□□□ 1.55
DDX54-207ENST00000550016 PELP1Q8IZL8 1130 aaKnown RBP24.74■■□□□ 1.55
DDX54-207ENST00000550016 ADCY9O60503 1353 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms