RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 PRR5LQ6MZQ0 368 aa12.81□□□□□ -0.36
HDAC7-229ENST00000549883 ZNF784Q8NCA9 323 aaPredicted RBP12.81□□□□□ -0.36
HDAC7-229ENST00000549883 CACNA1SQ13698 1873 aa12.8□□□□□ -0.36
HDAC7-229ENST00000549883 FAM177BA6PVY3 158 aa12.8□□□□□ -0.36
HDAC7-229ENST00000549883 ZNF853P0CG23 659 aa12.8□□□□□ -0.36
HDAC7-229ENST00000549883 NPM2Q86SE8 214 aaKnown RBP12.8□□□□□ -0.36
HDAC7-229ENST00000549883 MBIPQ9NS73 344 aa12.8□□□□□ -0.36
HDAC7-229ENST00000549883 BABAM1Q9NWV8 329 aa12.8□□□□□ -0.36
HDAC7-229ENST00000549883 SETDB2Q96T68 719 aa12.79□□□□□ -0.36
HDAC7-229ENST00000549883 ZBTB3Q9H5J0 574 aa12.79□□□□□ -0.36
HDAC7-229ENST00000549883 PIM2Q9P1W9 311 aa12.79□□□□□ -0.36
HDAC7-229ENST00000549883 C2CD5Q86YS7 1000 aa12.78□□□□□ -0.36
HDAC7-229ENST00000549883 CFAP44Q96MT7 982 aa12.78□□□□□ -0.36
HDAC7-229ENST00000549883 NIP7Q9Y221 180 aaKnown RBP eCLIP12.78□□□□□ -0.36
HDAC7-229ENST00000549883 TNRC6CQ9HCJ0 1690 aaKnown RBP12.77□□□□□ -0.36
HDAC7-229ENST00000549883 SLX4Q8IY92 1834 aa12.77□□□□□ -0.37
HDAC7-229ENST00000549883 SBF1O95248 1867 aa12.77□□□□□ -0.37
HDAC7-229ENST00000549883 ELL2O00472 640 aaPredicted RBP12.77□□□□□ -0.37
HDAC7-229ENST00000549883 GPTP24298 496 aa12.77□□□□□ -0.37
HDAC7-229ENST00000549883 DUSP27Q5VZP5 1158 aa12.77□□□□□ -0.37
HDAC7-229ENST00000549883 CLEC4GQ6UXB4 293 aa12.77□□□□□ -0.37
HDAC7-229ENST00000549883 ARHGAP27Q6ZUM4 889 aa12.77□□□□□ -0.37
HDAC7-229ENST00000549883 CNBD1Q8NA66 436 aa12.77□□□□□ -0.37
HDAC7-229ENST00000549883 SALL2Q9Y467 1007 aaPredicted RBP12.77□□□□□ -0.37
HDAC7-229ENST00000549883 MAP3K15Q6ZN16 1313 aa12.77□□□□□ -0.37
HDAC7-229ENST00000549883 CCDC88AQ3V6T2 1871 aa12.76□□□□□ -0.37
HDAC7-229ENST00000549883 DALRD3Q5D0E6 543 aaKnown RBP12.76□□□□□ -0.37
HDAC7-229ENST00000549883 NBPF5PQ86XG9 351 aaPredicted RBP12.76□□□□□ -0.37
HDAC7-229ENST00000549883 FAM9BQ8IZU0 186 aa12.76□□□□□ -0.37
HDAC7-229ENST00000549883 C8orf58Q8NAV2 365 aa12.76□□□□□ -0.37
HDAC7-229ENST00000549883 ZNF428Q96B54 188 aa12.76□□□□□ -0.37
HDAC7-229ENST00000549883 IFT57Q9NWB7 429 aa12.76□□□□□ -0.37
HDAC7-229ENST00000549883 CHPF2Q9P2E5 772 aa12.76□□□□□ -0.37
HDAC7-229ENST00000549883 ZNF652Q9Y2D9 606 aa12.76□□□□□ -0.37
HDAC7-229ENST00000549883 UBN2Q6ZU65 1347 aa12.76□□□□□ -0.37
HDAC7-229ENST00000549883 ERVV-1B6SEH8 477 aa12.75□□□□□ -0.37
HDAC7-229ENST00000549883 AIMP1Q12904 312 aaKnown RBP12.75□□□□□ -0.37
HDAC7-229ENST00000549883 ERBB4Q15303 1308 aa12.75□□□□□ -0.37
HDAC7-229ENST00000549883 ANKRD36CQ5JPF3 1778 aa12.75□□□□□ -0.37
HDAC7-229ENST00000549883 KIF6Q6ZMV9 814 aa12.75□□□□□ -0.37
HDAC7-229ENST00000549883 COPS6Q7L5N1 327 aa12.75□□□□□ -0.37
HDAC7-229ENST00000549883 WWC1Q8IX03 1113 aa12.75□□□□□ -0.37
HDAC7-229ENST00000549883 XAGE3Q8WTP9 111 aa12.75□□□□□ -0.37
HDAC7-229ENST00000549883 TSR2Q969E8 191 aaKnown RBP12.75□□□□□ -0.37
HDAC7-229ENST00000549883 BRIP1Q9BX63 1249 aa12.75□□□□□ -0.37
HDAC7-229ENST00000549883 ATP10DQ9P241 1426 aa12.74□□□□□ -0.37
HDAC7-229ENST00000549883 ADCY9O60503 1353 aa12.74□□□□□ -0.37
HDAC7-229ENST00000549883 ABCC12Q96J65 1359 aa12.74□□□□□ -0.37
HDAC7-229ENST00000549883 H0YIN7 160 aa12.74□□□□□ -0.37
HDAC7-229ENST00000549883 GNAI1P63096 354 aa12.74□□□□□ -0.37
HDAC7-229ENST00000549883 HDGFL1Q5TGJ6 251 aa12.74□□□□□ -0.37
HDAC7-229ENST00000549883 NUTM1Q86Y26 1132 aa12.74□□□□□ -0.37
HDAC7-229ENST00000549883 TSPYL6Q8N831 410 aa12.74□□□□□ -0.37
HDAC7-229ENST00000549883 DDX21Q9NR30 783 aaKnown RBP eCLIP12.74□□□□□ -0.37
HDAC7-229ENST00000549883 NPHP1O15259 732 aa12.73□□□□□ -0.37
HDAC7-229ENST00000549883 PRELPP51888 382 aa12.73□□□□□ -0.37
HDAC7-229ENST00000549883 ST5P78524 1137 aa12.73□□□□□ -0.37
HDAC7-229ENST00000549883 RASSF7Q02833 373 aa12.73□□□□□ -0.37
HDAC7-229ENST00000549883 ERFEQ4G0M1 354 aa12.73□□□□□ -0.37
HDAC7-229ENST00000549883 SUSD4Q5VX71 490 aa12.73□□□□□ -0.37
HDAC7-229ENST00000549883 ZNF34Q8IZ26 560 aa12.73□□□□□ -0.37
HDAC7-229ENST00000549883 ZNF526Q8TF50 670 aaPredicted RBP12.73□□□□□ -0.37
HDAC7-229ENST00000549883 ZNF622Q969S3 477 aaKnown RBP eCLIP12.73□□□□□ -0.37
HDAC7-229ENST00000549883 ZNF219Q9P2Y4 722 aaPredicted RBP12.73□□□□□ -0.37
HDAC7-229ENST00000549883 ARFGEF2Q9Y6D5 1785 aa12.72□□□□□ -0.37
HDAC7-229ENST00000549883 RGL2O15211 777 aa12.72□□□□□ -0.37
HDAC7-229ENST00000549883 SRGNP10124 158 aa12.72□□□□□ -0.37
HDAC7-229ENST00000549883 PDE6BP35913 854 aa12.72□□□□□ -0.37
HDAC7-229ENST00000549883 CCDC27Q2M243 656 aa12.72□□□□□ -0.37
HDAC7-229ENST00000549883 GIGYF2Q6Y7W6 1299 aaKnown RBP12.72□□□□□ -0.37
HDAC7-229ENST00000549883 C3orf67Q6ZVT6 689 aa12.72□□□□□ -0.37
HDAC7-229ENST00000549883 SLC51AQ86UW1 340 aa12.72□□□□□ -0.37
HDAC7-229ENST00000549883 TTLL6Q8N841 843 aa12.72□□□□□ -0.37
HDAC7-229ENST00000549883 TCERG1O14776 1098 aaKnown RBP12.71□□□□□ -0.37
HDAC7-229ENST00000549883 OLFM4Q6UX06 510 aa12.71□□□□□ -0.37
HDAC7-229ENST00000549883 TPTE2Q6XPS3 522 aa12.71□□□□□ -0.37
HDAC7-229ENST00000549883 SYNE4Q8N205 404 aa12.71□□□□□ -0.37
HDAC7-229ENST00000549883 SPINK5Q9NQ38 1064 aaPredicted RBP12.71□□□□□ -0.37
HDAC7-229ENST00000549883 FER1L6Q2WGJ9 1857 aa12.71□□□□□ -0.37
HDAC7-229ENST00000549883 C21orf2O43822 256 aa12.7□□□□□ -0.38
HDAC7-229ENST00000549883 NTSR2O95665 410 aa12.7□□□□□ -0.38
HDAC7-229ENST00000549883 HOXB7P09629 217 aa12.7□□□□□ -0.38
HDAC7-229ENST00000549883 CALD1Q05682 793 aaKnown RBP12.7□□□□□ -0.38
HDAC7-229ENST00000549883 C9orf131Q5VYM1 1079 aa12.7□□□□□ -0.38
HDAC7-229ENST00000549883 PHAXQ9H814 394 aaKnown RBP12.7□□□□□ -0.38
HDAC7-229ENST00000549883 LAMB2P55268 1798 aa12.7□□□□□ -0.38
HDAC7-229ENST00000549883 TAF1P21675 1872 aa12.7□□□□□ -0.38
HDAC7-229ENST00000549883 KLRG2A4D1S0 409 aaPredicted RBP12.69□□□□□ -0.38
HDAC7-229ENST00000549883 NFKBIEO00221 500 aa12.69□□□□□ -0.38
HDAC7-229ENST00000549883 DBF4Q9UBU7 674 aaPredicted RBP12.69□□□□□ -0.38
HDAC7-229ENST00000549883 GTF2E1P29083 439 aaPredicted RBP12.68□□□□□ -0.38
HDAC7-229ENST00000549883 TCIRG1Q13488 830 aa12.68□□□□□ -0.38
HDAC7-229ENST00000549883 STYK1Q6J9G0 422 aa12.68□□□□□ -0.38
HDAC7-229ENST00000549883 PRPF40BQ6NWY9 871 aaKnown RBP12.68□□□□□ -0.38
HDAC7-229ENST00000549883 NLRP10Q86W26 655 aa12.68□□□□□ -0.38
HDAC7-229ENST00000549883 MASTLQ96GX5 879 aa12.68□□□□□ -0.38
HDAC7-229ENST00000549883 FANCIQ9NVI1 1328 aa12.67□□□□□ -0.38
HDAC7-229ENST00000549883 ATP5J2-PTCD1G3V325 749 aa12.67□□□□□ -0.38
HDAC7-229ENST00000549883 ANKRD13DQ6ZTN6 518 aa12.67□□□□□ -0.38
HDAC7-229ENST00000549883 PLBD2Q8NHP8 589 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms