RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 COL5A3P25940 1745 aaPredicted RBP21.97■■□□□ 1.11
LETMD1-220ENST00000549686 TXNRD1Q16881 649 aa21.96■■□□□ 1.11
LETMD1-220ENST00000549686 METTL22Q9BUU2 404 aaPredicted RBP21.96■■□□□ 1.11
LETMD1-220ENST00000549686 RGL2O15211 777 aa21.95■■□□□ 1.1
LETMD1-220ENST00000549686 SF3B2Q13435 895 aaKnown RBP21.95■■□□□ 1.1
LETMD1-220ENST00000549686 BEND3Q5T5X7 828 aa21.95■■□□□ 1.1
LETMD1-220ENST00000549686 TTLL7Q6ZT98 887 aa21.95■■□□□ 1.1
LETMD1-220ENST00000549686 LINS1Q8NG48 757 aa21.95■■□□□ 1.1
LETMD1-220ENST00000549686 ZNF330Q9Y3S2 320 aaPredicted RBP21.95■■□□□ 1.1
LETMD1-220ENST00000549686 ERVV-1B6SEH8 477 aa21.94■■□□□ 1.1
LETMD1-220ENST00000549686 ZBTB7BO15156 539 aaPredicted RBP21.94■■□□□ 1.1
LETMD1-220ENST00000549686 RPS6KA4O75676 772 aa21.94■■□□□ 1.1
LETMD1-220ENST00000549686 CCDC125Q86Z20 511 aa21.94■■□□□ 1.1
LETMD1-220ENST00000549686 MAP3K15Q6ZN16 1313 aa21.94■■□□□ 1.1
LETMD1-220ENST00000549686 RGPD3A6NKT7 1758 aaPredicted RBP21.93■■□□□ 1.1
LETMD1-220ENST00000549686 HSP90AB3PQ58FF7 597 aa21.93■■□□□ 1.1
LETMD1-220ENST00000549686 RGPD4Q7Z3J3 1758 aa21.93■■□□□ 1.1
LETMD1-220ENST00000549686 AK7Q96M32 723 aa21.93■■□□□ 1.1
LETMD1-220ENST00000549686 LRRC4BQ9NT99 713 aa21.93■■□□□ 1.1
LETMD1-220ENST00000549686 TNS1Q9HBL0 1735 aaKnown RBP21.92■■□□□ 1.1
LETMD1-220ENST00000549686 COL15A1P39059 1388 aa21.92■■□□□ 1.1
LETMD1-220ENST00000549686 KCNQ4P56696 695 aa21.92■■□□□ 1.1
LETMD1-220ENST00000549686 DZIP3Q86Y13 1208 aaKnown RBP21.92■■□□□ 1.1
LETMD1-220ENST00000549686 ZBTB40Q9NUA8 1239 aa21.92■■□□□ 1.1
LETMD1-220ENST00000549686 HDAC5Q9UQL6 1122 aa21.92■■□□□ 1.1
LETMD1-220ENST00000549686 RTCBQ9Y3I0 505 aaKnown RBP21.92■■□□□ 1.1
LETMD1-220ENST00000549686 GNAI3P08754 354 aa21.91■■□□□ 1.1
LETMD1-220ENST00000549686 ADRA2BP18089 450 aa21.91■■□□□ 1.1
LETMD1-220ENST00000549686 GNPATO15228 680 aa21.9■■□□□ 1.1
LETMD1-220ENST00000549686 BAG6P46379 1132 aa21.9■■□□□ 1.1
LETMD1-220ENST00000549686 PROM2Q8N271 834 aa21.9■■□□□ 1.1
LETMD1-220ENST00000549686 ZBTB3Q9H5J0 574 aa21.9■■□□□ 1.1
LETMD1-220ENST00000549686 N4BP2Q86UW6 1770 aaPredicted RBP21.89■■□□□ 1.1
LETMD1-220ENST00000549686 EP400Q96L91 3159 aa21.89■■□□□ 1.1
LETMD1-220ENST00000549686 C4BP0C0L5 1744 aa21.89■■□□□ 1.1
LETMD1-220ENST00000549686 GIGYF2Q6Y7W6 1299 aaKnown RBP21.89■■□□□ 1.09
LETMD1-220ENST00000549686 ARXQ96QS3 562 aa21.89■■□□□ 1.09
LETMD1-220ENST00000549686 MYD88Q99836 296 aa21.89■■□□□ 1.09
LETMD1-220ENST00000549686 TRIM28Q13263 835 aaKnown RBP21.88■■□□□ 1.09
LETMD1-220ENST00000549686 TCIRG1Q13488 830 aa21.88■■□□□ 1.09
LETMD1-220ENST00000549686 ZNF652Q9Y2D9 606 aa21.88■■□□□ 1.09
LETMD1-220ENST00000549686 NEURL1BA8MQ27 555 aa21.87■■□□□ 1.09
LETMD1-220ENST00000549686 IGKV5-2P06315 115 aa21.87■■□□□ 1.09
LETMD1-220ENST00000549686 TBC1D2BQ9UPU7 963 aa21.87■■□□□ 1.09
LETMD1-220ENST00000549686 TAF1LQ8IZX4 1826 aa21.87■■□□□ 1.09
LETMD1-220ENST00000549686 MYH14Q7Z406 1995 aaKnown RBP21.87■■□□□ 1.09
LETMD1-220ENST00000549686 SSFA2P28290 1259 aa21.86■■□□□ 1.09
LETMD1-220ENST00000549686 CLEC4GQ6UXB4 293 aa21.86■■□□□ 1.09
LETMD1-220ENST00000549686 CCDC191Q8NCU4 936 aa21.86■■□□□ 1.09
LETMD1-220ENST00000549686 CCDC136Q96JN2 1154 aa21.86■■□□□ 1.09
LETMD1-220ENST00000549686 CAMKK2Q96RR4 588 aa21.86■■□□□ 1.09
LETMD1-220ENST00000549686 USP44Q9H0E7 712 aa21.86■■□□□ 1.09
LETMD1-220ENST00000549686 CAMTA2O94983 1202 aa21.85■■□□□ 1.09
LETMD1-220ENST00000549686 UBTFL1P0CB47 393 aaPredicted RBP21.85■■□□□ 1.09
LETMD1-220ENST00000549686 GCKRQ14397 625 aa21.85■■□□□ 1.09
LETMD1-220ENST00000549686 TRAPPC3LQ5T215 181 aa21.85■■□□□ 1.09
LETMD1-220ENST00000549686 MEIS3Q99687 375 aa21.85■■□□□ 1.09
LETMD1-220ENST00000549686 ISCA1Q9BUE6 129 aa21.85■■□□□ 1.09
LETMD1-220ENST00000549686 C9orf78Q9NZ63 289 aaPredicted RBP21.85■■□□□ 1.09
LETMD1-220ENST00000549686 NARFQ9UHQ1 456 aa21.85■■□□□ 1.09
LETMD1-220ENST00000549686 ARFGEF2Q9Y6D5 1785 aa21.84■■□□□ 1.09
LETMD1-220ENST00000549686 UTYO14607 1347 aa21.84■■□□□ 1.09
LETMD1-220ENST00000549686 NUP188Q5SRE5 1749 aa21.84■■□□□ 1.09
LETMD1-220ENST00000549686 GRM8O00222 908 aa21.84■■□□□ 1.09
LETMD1-220ENST00000549686 GNAI2P04899 355 aa21.84■■□□□ 1.09
LETMD1-220ENST00000549686 CWF19L2Q2TBE0 894 aaKnown RBP21.84■■□□□ 1.09
LETMD1-220ENST00000549686 FLAD1Q8NFF5 587 aa21.84■■□□□ 1.09
LETMD1-220ENST00000549686 CWC25Q9NXE8 425 aaPredicted RBP21.84■■□□□ 1.09
LETMD1-220ENST00000549686 ZPR1O75312 459 aa21.83■■□□□ 1.09
LETMD1-220ENST00000549686 EN1Q05925 392 aaPredicted RBP21.82■■□□□ 1.08
LETMD1-220ENST00000549686 HLFQ16534 295 aa21.82■■□□□ 1.08
LETMD1-220ENST00000549686 AKT1S1Q96B36 256 aa21.82■■□□□ 1.08
LETMD1-220ENST00000549686 ATP5J2-PTCD1G3V325 749 aa21.81■■□□□ 1.08
LETMD1-220ENST00000549686 RFC4P35249 363 aa21.81■■□□□ 1.08
LETMD1-220ENST00000549686 PARP10Q53GL7 1025 aa21.81■■□□□ 1.08
LETMD1-220ENST00000549686 RPAP2Q8IXW5 612 aaPredicted RBP21.81■■□□□ 1.08
LETMD1-220ENST00000549686 ARHGEF1Q92888 912 aaKnown RBP21.81■■□□□ 1.08
LETMD1-220ENST00000549686 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.8■■□□□ 1.08
LETMD1-220ENST00000549686 EZH2Q15910 746 aaKnown RBP21.8■■□□□ 1.08
LETMD1-220ENST00000549686 ZNF34Q8IZ26 560 aa21.8■■□□□ 1.08
LETMD1-220ENST00000549686 RWDD1Q9H446 243 aaPredicted RBP21.8■■□□□ 1.08
LETMD1-220ENST00000549686 PCDHB15Q9Y5E8 787 aa21.8■■□□□ 1.08
LETMD1-220ENST00000549686 HDAC1Q13547 482 aaPredicted RBP21.79■■□□□ 1.08
LETMD1-220ENST00000549686 TFCP2L1Q9NZI6 479 aa21.79■■□□□ 1.08
LETMD1-220ENST00000549686 USP42Q9H9J4 1324 aaKnown RBP21.79■■□□□ 1.08
LETMD1-220ENST00000549686 NBPF7P0C2Y1 421 aaPredicted RBP21.78■■□□□ 1.08
LETMD1-220ENST00000549686 B4GALNT3Q6L9W6 998 aa21.78■■□□□ 1.08
LETMD1-220ENST00000549686 NLRP10Q86W26 655 aa21.78■■□□□ 1.08
LETMD1-220ENST00000549686 H7C1W4 665 aa21.77■■□□□ 1.08
LETMD1-220ENST00000549686 PHF14O94880 888 aa21.77■■□□□ 1.08
LETMD1-220ENST00000549686 HMMRO75330 724 aa21.76■■□□□ 1.07
LETMD1-220ENST00000549686 PCCAP05165 728 aaPredicted RBP21.76■■□□□ 1.07
LETMD1-220ENST00000549686 ZNF827Q17R98 1081 aa21.76■■□□□ 1.07
LETMD1-220ENST00000549686 USPL1Q5W0Q7 1092 aa21.76■■□□□ 1.07
LETMD1-220ENST00000549686 CENPQQ7L2Z9 268 aaPredicted RBP21.76■■□□□ 1.07
LETMD1-220ENST00000549686 ANKRD44Q8N8A2 993 aa21.76■■□□□ 1.07
LETMD1-220ENST00000549686 ZBTB38Q8NAP3 1195 aaPredicted RBP21.76■■□□□ 1.07
LETMD1-220ENST00000549686 C1orf115Q9H7X2 142 aa21.76■■□□□ 1.07
LETMD1-220ENST00000549686 STK32BQ9NY57 414 aa21.76■■□□□ 1.07
LETMD1-220ENST00000549686 LRRFIP2Q9Y608 721 aaKnown RBP21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms