RNA–Protein interactions for RNA: ENST00000549455.1

ATXN2-218, Transcript of ataxin 2, humanhuman

TSL 4

Gene ATXN2, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-218ENST00000549455 U2AF1Q01081 240 aaKnown RBP eCLIP19.4■□□□□ 0.7
ATXN2-218ENST00000549455 RTF1Q92541 710 aaKnown RBP19.4■□□□□ 0.7
ATXN2-218ENST00000549455 USP16Q9Y5T5 823 aa19.4■□□□□ 0.7
ATXN2-218ENST00000549455 MCM10Q7L590 875 aa19.39■□□□□ 0.69
ATXN2-218ENST00000549455 LAMB4A4D0S4 1761 aa19.39■□□□□ 0.69
ATXN2-218ENST00000549455 ERFEQ4G0M1 354 aa19.38■□□□□ 0.69
ATXN2-218ENST00000549455 DPY19L2Q6NUT2 758 aa19.38■□□□□ 0.69
ATXN2-218ENST00000549455 JMYQ8N9B5 988 aa19.38■□□□□ 0.69
ATXN2-218ENST00000549455 CNKSR1Q969H4 720 aa19.38■□□□□ 0.69
ATXN2-218ENST00000549455 TAOK3Q9H2K8 898 aa19.38■□□□□ 0.69
ATXN2-218ENST00000549455 DLG5Q8TDM6 1919 aa19.37■□□□□ 0.69
ATXN2-218ENST00000549455 PPP2R1AP30153 589 aa19.37■□□□□ 0.69
ATXN2-218ENST00000549455 STYK1Q6J9G0 422 aa19.37■□□□□ 0.69
ATXN2-218ENST00000549455 SNRPA1P09661 255 aaKnown RBP19.36■□□□□ 0.69
ATXN2-218ENST00000549455 DCTN1Q14203 1278 aa19.36■□□□□ 0.69
ATXN2-218ENST00000549455 PRPF40BQ6NWY9 871 aaKnown RBP19.36■□□□□ 0.69
ATXN2-218ENST00000549455 NBPF5PQ86XG9 351 aaPredicted RBP19.36■□□□□ 0.69
ATXN2-218ENST00000549455 MASTLQ96GX5 879 aa19.36■□□□□ 0.69
ATXN2-218ENST00000549455 LTBP3Q9NS15 1303 aa19.35■□□□□ 0.69
ATXN2-218ENST00000549455 POTECB2RU33 542 aa19.35■□□□□ 0.69
ATXN2-218ENST00000549455 SRGNP10124 158 aa19.35■□□□□ 0.69
ATXN2-218ENST00000549455 ZNF652Q9Y2D9 606 aa19.35■□□□□ 0.69
ATXN2-218ENST00000549455 SOGA3Q5TF21 947 aa19.33■□□□□ 0.68
ATXN2-218ENST00000549455 CLEC4GQ6UXB4 293 aa19.33■□□□□ 0.68
ATXN2-218ENST00000549455 KDM3BQ7LBC6 1761 aa19.33■□□□□ 0.68
ATXN2-218ENST00000549455 FAM177BA6PVY3 158 aa19.32■□□□□ 0.68
ATXN2-218ENST00000549455 NIP7Q9Y221 180 aaKnown RBP eCLIP19.32■□□□□ 0.68
ATXN2-218ENST00000549455 NBPF26B4DH59 902 aa19.31■□□□□ 0.68
ATXN2-218ENST00000549455 DDNO94850 711 aaPredicted RBP19.31■□□□□ 0.68
ATXN2-218ENST00000549455 COL13A1Q5TAT6 717 aaPredicted RBP19.31■□□□□ 0.68
ATXN2-218ENST00000549455 NBPF10Q6P3W6 841 aaKnown RBP19.31■□□□□ 0.68
ATXN2-218ENST00000549455 NBPF15Q8N660 670 aa19.31■□□□□ 0.68
ATXN2-218ENST00000549455 SCN4AP35499 1836 aa19.3■□□□□ 0.68
ATXN2-218ENST00000549455 NUP98P52948 1817 aa19.3■□□□□ 0.68
ATXN2-218ENST00000549455 CCDC93Q567U6 631 aa19.3■□□□□ 0.68
ATXN2-218ENST00000549455 HTATSF1O43719 755 aaKnown RBP19.29■□□□□ 0.68
ATXN2-218ENST00000549455 NPR1P16066 1061 aa19.29■□□□□ 0.68
ATXN2-218ENST00000549455 TPTE2Q6XPS3 522 aa19.29■□□□□ 0.68
ATXN2-218ENST00000549455 MIS18AQ9NYP9 233 aa19.29■□□□□ 0.68
ATXN2-218ENST00000549455 TAF7Q15545 349 aaPredicted RBP19.28■□□□□ 0.68
ATXN2-218ENST00000549455 CHADLQ6NUI6 762 aa19.28■□□□□ 0.68
ATXN2-218ENST00000549455 NEFMP07197 916 aa19.27■□□□□ 0.68
ATXN2-218ENST00000549455 POTEIP0CG38 1075 aa19.27■□□□□ 0.68
ATXN2-218ENST00000549455 POTEJP0CG39 1038 aa19.27■□□□□ 0.68
ATXN2-218ENST00000549455 NGEFQ8N5V2 710 aa19.27■□□□□ 0.68
ATXN2-218ENST00000549455 PCNTO95613 3336 aa19.26■□□□□ 0.67
ATXN2-218ENST00000549455 HSPA1AP0DMV8 641 aaKnown RBP19.26■□□□□ 0.67
ATXN2-218ENST00000549455 HSPA1BP0DMV9 641 aaKnown RBP19.26■□□□□ 0.67
ATXN2-218ENST00000549455 GTF2E1P29083 439 aaPredicted RBP19.26■□□□□ 0.67
ATXN2-218ENST00000549455 HLFQ16534 295 aa19.26■□□□□ 0.67
ATXN2-218ENST00000549455 C7orf43Q8WVR3 580 aa19.26■□□□□ 0.67
ATXN2-218ENST00000549455 RGL2O15211 777 aa19.25■□□□□ 0.67
ATXN2-218ENST00000549455 FKBP4Q02790 459 aaKnown RBP eCLIP19.25■□□□□ 0.67
ATXN2-218ENST00000549455 OLFM4Q6UX06 510 aa19.25■□□□□ 0.67
ATXN2-218ENST00000549455 ZNF277Q9NRM2 450 aaPredicted RBP19.25■□□□□ 0.67
ATXN2-218ENST00000549455 KLRG2A4D1S0 409 aaPredicted RBP19.24■□□□□ 0.67
ATXN2-218ENST00000549455 IQCA1LA6NCM1 817 aa19.24■□□□□ 0.67
ATXN2-218ENST00000549455 CAPN15O75808 1086 aa19.24■□□□□ 0.67
ATXN2-218ENST00000549455 ZNF541Q9H0D2 1346 aa19.24■□□□□ 0.67
ATXN2-218ENST00000549455 TNS4Q8IZW8 715 aa19.23■□□□□ 0.67
ATXN2-218ENST00000549455 ABCC12Q96J65 1359 aa19.22■□□□□ 0.67
ATXN2-218ENST00000549455 PNISRQ8TF01 805 aaKnown RBP19.22■□□□□ 0.67
ATXN2-218ENST00000549455 CREBZFQ9NS37 354 aa19.22■□□□□ 0.67
ATXN2-218ENST00000549455 MKRN1Q9UHC7 482 aaKnown RBP19.22■□□□□ 0.67
ATXN2-218ENST00000549455 RRP7AQ9Y3A4 280 aaKnown RBP19.22■□□□□ 0.67
ATXN2-218ENST00000549455 ALDH1B1P30837 517 aa19.21■□□□□ 0.67
ATXN2-218ENST00000549455 KIF6Q6ZMV9 814 aa19.21■□□□□ 0.67
ATXN2-218ENST00000549455 LDHDQ86WU2 507 aa19.21■□□□□ 0.67
ATXN2-218ENST00000549455 NUTM1Q86Y26 1132 aa19.21■□□□□ 0.67
ATXN2-218ENST00000549455 RTKN2Q8IZC4 609 aa19.21■□□□□ 0.67
ATXN2-218ENST00000549455 L3MBTL3Q96JM7 780 aaPredicted RBP19.21■□□□□ 0.67
ATXN2-218ENST00000549455 THUMPD2Q9BTF0 503 aaKnown RBP19.21■□□□□ 0.67
ATXN2-218ENST00000549455 NYXQ9GZU5 481 aa19.21■□□□□ 0.67
ATXN2-218ENST00000549455 TAF1DQ9H5J8 278 aaPredicted RBP19.21■□□□□ 0.67
ATXN2-218ENST00000549455 MYL6BP14649 208 aa19.2■□□□□ 0.66
ATXN2-218ENST00000549455 EAPPQ56P03 285 aaPredicted RBP19.2■□□□□ 0.66
ATXN2-218ENST00000549455 MAP3K15Q6ZN16 1313 aa19.2■□□□□ 0.66
ATXN2-218ENST00000549455 GPTP24298 496 aa19.19■□□□□ 0.66
ATXN2-218ENST00000549455 IARSP41252 1262 aaKnown RBP19.19■□□□□ 0.66
ATXN2-218ENST00000549455 EIF4A1P60842 406 aaKnown RBP19.19■□□□□ 0.66
ATXN2-218ENST00000549455 NFE2L2Q16236 605 aa19.19■□□□□ 0.66
ATXN2-218ENST00000549455 TTLL7Q6ZT98 887 aa19.19■□□□□ 0.66
ATXN2-218ENST00000549455 SYNE4Q8N205 404 aa19.19■□□□□ 0.66
ATXN2-218ENST00000549455 ZBTB3Q9H5J0 574 aa19.19■□□□□ 0.66
ATXN2-218ENST00000549455 MAPK8IP3Q9UPT6 1336 aa19.19■□□□□ 0.66
ATXN2-218ENST00000549455 ADAMTSL1Q8N6G6 1762 aa19.19■□□□□ 0.66
ATXN2-218ENST00000549455 ERVV-1B6SEH8 477 aa19.18■□□□□ 0.66
ATXN2-218ENST00000549455 PLEKHF1Q96S99 279 aa19.18■□□□□ 0.66
ATXN2-218ENST00000549455 HACL1Q9UJ83 578 aa19.18■□□□□ 0.66
ATXN2-218ENST00000549455 CLEC11AQ9Y240 323 aa19.18■□□□□ 0.66
ATXN2-218ENST00000549455 RPGRQ92834 1020 aaKnown RBP19.17■□□□□ 0.66
ATXN2-218ENST00000549455 RNF123Q5XPI4 1314 aa19.17■□□□□ 0.66
ATXN2-218ENST00000549455 PASKQ96RG2 1323 aa19.17■□□□□ 0.66
ATXN2-218ENST00000549455 EPHX2P34913 555 aa19.16■□□□□ 0.66
ATXN2-218ENST00000549455 CRY2Q49AN0 593 aa19.16■□□□□ 0.66
ATXN2-218ENST00000549455 UBN2Q6ZU65 1347 aa19.16■□□□□ 0.66
ATXN2-218ENST00000549455 CNTNAP1P78357 1384 aa19.16■□□□□ 0.66
ATXN2-218ENST00000549455 SNED1Q8TER0 1413 aa19.16■□□□□ 0.66
ATXN2-218ENST00000549455 FZD9O00144 591 aa19.15■□□□□ 0.66
ATXN2-218ENST00000549455 JDP2Q8WYK2 163 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms