RNA–Protein interactions for RNA: ENST00000549308.5

PTPRR-209, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-209ENST00000549308 CWF19L2Q2TBE0 894 aaKnown RBP15.14■□□□□ 0.01
PTPRR-209ENST00000549308 KIF6Q6ZMV9 814 aa15.14■□□□□ 0.01
PTPRR-209ENST00000549308 NPM2Q86SE8 214 aaKnown RBP15.14■□□□□ 0.01
PTPRR-209ENST00000549308 RPAP2Q8IXW5 612 aaPredicted RBP15.14■□□□□ 0.01
PTPRR-209ENST00000549308 ANKRD44Q8N8A2 993 aa15.14■□□□□ 0.01
PTPRR-209ENST00000549308 NUP188Q5SRE5 1749 aa15.13■□□□□ 0.01
PTPRR-209ENST00000549308 ZNF831Q5JPB2 1677 aa15.13■□□□□ 0.01
PTPRR-209ENST00000549308 CEP85Q6P2H3 762 aa15.13■□□□□ 0.01
PTPRR-209ENST00000549308 ARXQ96QS3 562 aa15.13■□□□□ 0.01
PTPRR-209ENST00000549308 ZBTB3Q9H5J0 574 aa15.13■□□□□ 0.01
PTPRR-209ENST00000549308 CCDC87Q9NVE4 849 aa15.13■□□□□ 0.01
PTPRR-209ENST00000549308 C9orf78Q9NZ63 289 aaPredicted RBP15.13■□□□□ 0.01
PTPRR-209ENST00000549308 CRKLP46109 303 aaKnown RBP15.12■□□□□ 0.01
PTPRR-209ENST00000549308 BCL11BQ9C0K0 894 aaPredicted RBP15.12■□□□□ 0.01
PTPRR-209ENST00000549308 LRRFIP2Q9Y608 721 aaKnown RBP15.12■□□□□ 0.01
PTPRR-209ENST00000549308 AFDNP55196 1824 aaKnown RBP15.12■□□□□ 0.01
PTPRR-209ENST00000549308 NEURL1BA8MQ27 555 aa15.11■□□□□ 0.01
PTPRR-209ENST00000549308 IGKV5-2P06315 115 aa15.11■□□□□ 0.01
PTPRR-209ENST00000549308 IL6STP40189 918 aaPredicted RBP15.11■□□□□ 0.01
PTPRR-209ENST00000549308 SIRT2Q8IXJ6 389 aa15.11■□□□□ 0.01
PTPRR-209ENST00000549308 RREB1Q92766 1687 aa15.11■□□□□ 0.01
PTPRR-209ENST00000549308 COL5A3P25940 1745 aaPredicted RBP15.11■□□□□ 0.01
PTPRR-209ENST00000549308 HMMRO75330 724 aa15.1■□□□□ 0.01
PTPRR-209ENST00000549308 INTS5Q6P9B9 1019 aaKnown RBP15.1■□□□□ 0.01
PTPRR-209ENST00000549308 HDAC5Q9UQL6 1122 aa15.1■□□□□ 0.01
PTPRR-209ENST00000549308 ATP5J2-PTCD1G3V325 749 aa15.1■□□□□ 0.01
PTPRR-209ENST00000549308 GRM8O00222 908 aa15.1■□□□□ 0.01
PTPRR-209ENST00000549308 NBPF7P0C2Y1 421 aaPredicted RBP15.1■□□□□ 0.01
PTPRR-209ENST00000549308 LINC00116Q8NCU8 138 aa15.1■□□□□ 0.01
PTPRR-209ENST00000549308 GCC1Q96CN9 775 aa15.1■□□□□ 0.01
PTPRR-209ENST00000549308 RGS17Q9UGC6 210 aaPredicted RBP15.1■□□□□ 0.01
PTPRR-209ENST00000549308 CCNL1Q9UK58 526 aaPredicted RBP15.1■□□□□ 0.01
PTPRR-209ENST00000549308 PDZRN3Q9UPQ7 1066 aa15.1■□□□□ 0.01
PTPRR-209ENST00000549308 LY75O60449 1722 aa15.09■□□□□ 0.01
PTPRR-209ENST00000549308 IBTKQ9P2D0 1353 aaPredicted RBP15.09■□□□□ 0.01
PTPRR-209ENST00000549308 GCKRQ14397 625 aa15.09■□□□□ 0.01
PTPRR-209ENST00000549308 SKAP1Q86WV1 359 aa15.09■□□□□ 0.01
PTPRR-209ENST00000549308 SMC5Q8IY18 1101 aa15.09■□□□□ 0.01
PTPRR-209ENST00000549308 MAP3K15Q6ZN16 1313 aa15.09■□□□□ 0.01
PTPRR-209ENST00000549308 TRIM37O94972 964 aa15.08■□□□□ 0
PTPRR-209ENST00000549308 KCNQ4P56696 695 aa15.08■□□□□ 0
PTPRR-209ENST00000549308 ATP8B2P98198 1209 aa15.08■□□□□ 0
PTPRR-209ENST00000549308 POTEAQ6S8J7 498 aa15.08■□□□□ 0
PTPRR-209ENST00000549308 DZIP3Q86Y13 1208 aaKnown RBP15.08■□□□□ 0
PTPRR-209ENST00000549308 EIF5P55010 431 aaKnown RBP15.07■□□□□ 0
PTPRR-209ENST00000549308 UTYO14607 1347 aa15.07■□□□□ 0
PTPRR-209ENST00000549308 CNTNAP4Q9C0A0 1308 aa15.07■□□□□ 0
PTPRR-209ENST00000549308 RGS3P49796 1198 aa15.06■□□□□ 0
PTPRR-209ENST00000549308 TCIRG1Q13488 830 aa15.06■□□□□ 0
PTPRR-209ENST00000549308 CWC25Q9NXE8 425 aaPredicted RBP15.06■□□□□ 0
PTPRR-209ENST00000549308 HSP90AB3PQ58FF7 597 aa15.06■□□□□ 0
PTPRR-209ENST00000549308 GIGYF2Q6Y7W6 1299 aaKnown RBP15.06■□□□□ 0
PTPRR-209ENST00000549308 SUCLG2Q96I99 432 aa15.06■□□□□ 0
PTPRR-209ENST00000549308 TBC1D2BQ9UPU7 963 aa15.06■□□□□ 0
PTPRR-209ENST00000549308 MYH14Q7Z406 1995 aaKnown RBP15.05■□□□□ 0
PTPRR-209ENST00000549308 A0A087WZG4 1122 aa15.05■□□□□ -0
PTPRR-209ENST00000549308 PNMA6EA0A0J9YXQ4 647 aa15.05■□□□□ -0
PTPRR-209ENST00000549308 ERVV-1B6SEH8 477 aa15.05■□□□□ -0
PTPRR-209ENST00000549308 CCDC191Q8NCU4 936 aa15.05■□□□□ -0
PTPRR-209ENST00000549308 ISCA1Q9BUE6 129 aa15.05■□□□□ -0
PTPRR-209ENST00000549308 DCTPP1Q9H773 170 aa15.05■□□□□ -0
PTPRR-209ENST00000549308 COL15A1P39059 1388 aa15.05■□□□□ -0
PTPRR-209ENST00000549308 HLFQ16534 295 aa15.04■□□□□ -0
PTPRR-209ENST00000549308 RC3H1Q5TC82 1133 aaKnown RBP15.04■□□□□ -0
PTPRR-209ENST00000549308 ANKRD45Q5TZF3 282 aa15.04■□□□□ -0
PTPRR-209ENST00000549308 PPP1R42Q7Z4L9 355 aa15.04■□□□□ -0
PTPRR-209ENST00000549308 JARID2Q92833 1246 aaPredicted RBP15.04■□□□□ -0
PTPRR-209ENST00000549308 ZBTB47Q9UFB7 747 aaPredicted RBP15.04■□□□□ -0
PTPRR-209ENST00000549308 ANKRD36CQ5JPF3 1778 aa15.04■□□□□ -0
PTPRR-209ENST00000549308 TAF1LQ8IZX4 1826 aa15.04■□□□□ -0
PTPRR-209ENST00000549308 NUCB1Q02818 461 aa15.03■□□□□ -0
PTPRR-209ENST00000549308 UBE3BQ7Z3V4 1068 aa15.03■□□□□ -0
PTPRR-209ENST00000549308 SRGAP3O43295 1099 aa15.03■□□□□ -0
PTPRR-209ENST00000549308 TRIM28Q13263 835 aaKnown RBP15.03■□□□□ -0
PTPRR-209ENST00000549308 CHD1LQ86WJ1 897 aa15.03■□□□□ -0
PTPRR-209ENST00000549308 SSH3Q8TE77 659 aa15.03■□□□□ -0
PTPRR-209ENST00000549308 BICC1Q9H694 974 aaKnown RBP15.03■□□□□ -0
PTPRR-209ENST00000549308 NUP98P52948 1817 aa15.03■□□□□ -0
PTPRR-209ENST00000549308 H7C1W4 665 aa15.02□□□□□ -0.01
PTPRR-209ENST00000549308 RPS6KA4O75676 772 aa15.02□□□□□ -0.01
PTPRR-209ENST00000549308 GPTP24298 496 aa15.02□□□□□ -0.01
PTPRR-209ENST00000549308 POLA2Q14181 598 aa15.02□□□□□ -0.01
PTPRR-209ENST00000549308 LNPKQ9C0E8 428 aa15.02□□□□□ -0.01
PTPRR-209ENST00000549308 GNPATO15228 680 aa15.01□□□□□ -0.01
PTPRR-209ENST00000549308 CAMTA2O94983 1202 aa15.01□□□□□ -0.01
PTPRR-209ENST00000549308 MTX1Q13505 466 aa15.01□□□□□ -0.01
PTPRR-209ENST00000549308 KAZALD1Q96I82 304 aa15.01□□□□□ -0.01
PTPRR-209ENST00000549308 C4BP0C0L5 1744 aa15.01□□□□□ -0.01
PTPRR-209ENST00000549308 APBB1O00213 710 aa15□□□□□ -0.01
PTPRR-209ENST00000549308 CASP7P55210 303 aa15□□□□□ -0.01
PTPRR-209ENST00000549308 RTL5Q5HYW3 569 aaPredicted RBP15□□□□□ -0.01
PTPRR-209ENST00000549308 SLC27A3Q5K4L6 730 aa15□□□□□ -0.01
PTPRR-209ENST00000549308 AK7Q96M32 723 aa15□□□□□ -0.01
PTPRR-209ENST00000549308 EXOC6BQ9Y2D4 811 aa15□□□□□ -0.01
PTPRR-209ENST00000549308 ZNF652Q9Y2D9 606 aa15□□□□□ -0.01
PTPRR-209ENST00000549308 RTCBQ9Y3I0 505 aaKnown RBP15□□□□□ -0.01
PTPRR-209ENST00000549308 BCORQ6W2J9 1755 aa15□□□□□ -0.01
PTPRR-209ENST00000549308 PDE4AP27815 886 aa14.99□□□□□ -0.01
PTPRR-209ENST00000549308 NLRP10Q86W26 655 aa14.99□□□□□ -0.01
PTPRR-209ENST00000549308 LRRC4BQ9NT99 713 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms