RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 CLEC4GQ6UXB4 293 aa6.37□□□□□ -1.39
SCAF11-212ENST00000549162 ALDH8A1Q9H2A2 487 aaPredicted RBP6.37□□□□□ -1.39
SCAF11-212ENST00000549162 RPAP1Q9BWH6 1393 aaPredicted RBP6.37□□□□□ -1.39
SCAF11-212ENST00000549162 SRPK2P78362 688 aaKnown RBP6.37□□□□□ -1.39
SCAF11-212ENST00000549162 GZF1Q9H116 711 aaPredicted RBP6.37□□□□□ -1.39
SCAF11-212ENST00000549162 ORAI2Q96SN7 254 aa6.36□□□□□ -1.39
SCAF11-212ENST00000549162 ZSWIM8A7E2V4 1837 aa6.36□□□□□ -1.39
SCAF11-212ENST00000549162 STAP2Q9UGK3 403 aa6.36□□□□□ -1.39
SCAF11-212ENST00000549162 SIP14410 1827 aa6.36□□□□□ -1.39
SCAF11-212ENST00000549162 DOCK1Q14185 1865 aa6.36□□□□□ -1.39
SCAF11-212ENST00000549162 CIAO1O76071 339 aa6.36□□□□□ -1.39
SCAF11-212ENST00000549162 PYGBP11216 843 aa6.36□□□□□ -1.39
SCAF11-212ENST00000549162 SMC5Q8IY18 1101 aa6.36□□□□□ -1.39
SCAF11-212ENST00000549162 IFNL2Q8IZJ0 200 aa6.36□□□□□ -1.39
SCAF11-212ENST00000549162 ANKRD24Q8TF21 1146 aa6.36□□□□□ -1.39
SCAF11-212ENST00000549162 TAF7Q15545 349 aaPredicted RBP6.35□□□□□ -1.39
SCAF11-212ENST00000549162 TCP11L2Q8N4U5 519 aa6.35□□□□□ -1.39
SCAF11-212ENST00000549162 SMARCC1Q92922 1105 aaPredicted RBP6.35□□□□□ -1.39
SCAF11-212ENST00000549162 ISCA1Q9BUE6 129 aa6.35□□□□□ -1.39
SCAF11-212ENST00000549162 NBPF6Q5VWK0 638 aa6.35□□□□□ -1.39
SCAF11-212ENST00000549162 RETREG2Q8NC44 543 aa6.35□□□□□ -1.39
SCAF11-212ENST00000549162 NBPF4Q96M43 638 aa6.35□□□□□ -1.39
SCAF11-212ENST00000549162 MFRPQ9BY79 579 aa6.35□□□□□ -1.39
SCAF11-212ENST00000549162 AXIN2Q9Y2T1 843 aa6.35□□□□□ -1.39
SCAF11-212ENST00000549162 FAM83GA6ND36 823 aa6.35□□□□□ -1.39
SCAF11-212ENST00000549162 PPP1R37O75864 691 aa6.35□□□□□ -1.39
SCAF11-212ENST00000549162 IL2RBP14784 551 aa6.35□□□□□ -1.39
SCAF11-212ENST00000549162 RRP1P56182 461 aaKnown RBP6.34□□□□□ -1.39
SCAF11-212ENST00000549162 ZNF772Q68DY9 489 aaPredicted RBP6.34□□□□□ -1.39
SCAF11-212ENST00000549162 IL17REQ8NFR9 667 aa6.34□□□□□ -1.39
SCAF11-212ENST00000549162 HDAC5Q9UQL6 1122 aa6.34□□□□□ -1.39
SCAF11-212ENST00000549162 PALLDQ8WX93 1383 aa6.34□□□□□ -1.39
SCAF11-212ENST00000549162 LTBP3Q9NS15 1303 aa6.34□□□□□ -1.39
SCAF11-212ENST00000549162 MLLT3P42568 568 aaPredicted RBP6.34□□□□□ -1.39
SCAF11-212ENST00000549162 IRF5Q13568 498 aa6.34□□□□□ -1.39
SCAF11-212ENST00000549162 MTHFSDQ2M296 383 aaKnown RBP6.34□□□□□ -1.39
SCAF11-212ENST00000549162 FAM177A1Q8N128 213 aaPredicted RBP6.34□□□□□ -1.39
SCAF11-212ENST00000549162 SALL1Q9NSC2 1324 aa6.34□□□□□ -1.4
SCAF11-212ENST00000549162 OTOFQ9HC10 1997 aa6.34□□□□□ -1.4
SCAF11-212ENST00000549162 CSF1RP07333 972 aa6.33□□□□□ -1.4
SCAF11-212ENST00000549162 CDK11BP21127 795 aaKnown RBP6.33□□□□□ -1.4
SCAF11-212ENST00000549162 AKT1S1Q96B36 256 aa6.33□□□□□ -1.4
SCAF11-212ENST00000549162 ZBTB40Q9NUA8 1239 aa6.33□□□□□ -1.4
SCAF11-212ENST00000549162 DDX10Q13206 875 aaKnown RBP6.33□□□□□ -1.4
SCAF11-212ENST00000549162 TMC4Q7Z404 712 aa6.33□□□□□ -1.4
SCAF11-212ENST00000549162 ABTB2Q8N961 1025 aa6.33□□□□□ -1.4
SCAF11-212ENST00000549162 RASEFQ8IZ41 740 aa6.33□□□□□ -1.4
SCAF11-212ENST00000549162 CYP27B1O15528 508 aa6.32□□□□□ -1.4
SCAF11-212ENST00000549162 GIGYF1O75420 1035 aaPredicted RBP6.32□□□□□ -1.4
SCAF11-212ENST00000549162 IL6STP40189 918 aaPredicted RBP6.32□□□□□ -1.4
SCAF11-212ENST00000549162 HYPKQ9NX55 129 aa6.32□□□□□ -1.4
SCAF11-212ENST00000549162 DDX21Q9NR30 783 aaKnown RBP eCLIP6.32□□□□□ -1.4
SCAF11-212ENST00000549162 EMILIN1Q9Y6C2 1016 aa6.32□□□□□ -1.4
SCAF11-212ENST00000549162 HSP90B1P14625 803 aaKnown RBP6.32□□□□□ -1.4
SCAF11-212ENST00000549162 MTA3Q9BTC8 594 aa6.32□□□□□ -1.4
SCAF11-212ENST00000549162 API5Q9BZZ5 524 aaKnown RBP6.32□□□□□ -1.4
SCAF11-212ENST00000549162 A0A087WZG4 1122 aa6.31□□□□□ -1.4
SCAF11-212ENST00000549162 CCT4P50991 539 aaKnown RBP6.31□□□□□ -1.4
SCAF11-212ENST00000549162 MRIQ9BWK5 157 aa6.31□□□□□ -1.4
SCAF11-212ENST00000549162 ZNF34Q8IZ26 560 aa6.31□□□□□ -1.4
SCAF11-212ENST00000549162 DDRGK1Q96HY6 314 aa6.31□□□□□ -1.4
SCAF11-212ENST00000549162 MYH8P13535 1937 aa6.31□□□□□ -1.4
SCAF11-212ENST00000549162 TRPM7Q96QT4 1865 aa6.31□□□□□ -1.4
SCAF11-212ENST00000549162 MCM6Q14566 821 aa6.31□□□□□ -1.4
SCAF11-212ENST00000549162 TRPC5Q9UL62 973 aaPredicted RBP6.31□□□□□ -1.4
SCAF11-212ENST00000549162 H7C1W4 665 aa6.31□□□□□ -1.4
SCAF11-212ENST00000549162 GTF2E1P29083 439 aaPredicted RBP6.31□□□□□ -1.4
SCAF11-212ENST00000549162 MBIPQ9NS73 344 aa6.31□□□□□ -1.4
SCAF11-212ENST00000549162 WDR19Q8NEZ3 1342 aa6.3□□□□□ -1.4
SCAF11-212ENST00000549162 ROBO3Q96MS0 1386 aa6.3□□□□□ -1.4
SCAF11-212ENST00000549162 RLFQ13129 1914 aa6.3□□□□□ -1.4
SCAF11-212ENST00000549162 ZBTB7BO15156 539 aaPredicted RBP6.3□□□□□ -1.4
SCAF11-212ENST00000549162 RPAP2Q8IXW5 612 aaPredicted RBP6.3□□□□□ -1.4
SCAF11-212ENST00000549162 SSH3Q8TE77 659 aa6.3□□□□□ -1.4
SCAF11-212ENST00000549162 SYNPO2Q9UMS6 1093 aa6.3□□□□□ -1.4
SCAF11-212ENST00000549162 MYO5AQ9Y4I1 1855 aaKnown RBP6.3□□□□□ -1.4
SCAF11-212ENST00000549162 PTPRFP10586 1907 aa6.3□□□□□ -1.4
SCAF11-212ENST00000549162 CRY2Q49AN0 593 aa6.3□□□□□ -1.4
SCAF11-212ENST00000549162 PHACTR3Q96KR7 559 aa6.3□□□□□ -1.4
SCAF11-212ENST00000549162 RTFDC1Q9BY42 306 aaPredicted RBP6.3□□□□□ -1.4
SCAF11-212ENST00000549162 NOVP48745 357 aa6.29□□□□□ -1.4
SCAF11-212ENST00000549162 EIF5P55010 431 aaKnown RBP6.29□□□□□ -1.4
SCAF11-212ENST00000549162 MLECQ14165 292 aa6.29□□□□□ -1.4
SCAF11-212ENST00000549162 POM121Q96HA1 1249 aa6.29□□□□□ -1.4
SCAF11-212ENST00000549162 SSFA2P28290 1259 aa6.29□□□□□ -1.4
SCAF11-212ENST00000549162 HOXA10P31260 410 aaPredicted RBP6.29□□□□□ -1.4
SCAF11-212ENST00000549162 MVPQ14764 893 aaKnown RBP6.29□□□□□ -1.4
SCAF11-212ENST00000549162 HSP90AB2PQ58FF8 381 aa6.29□□□□□ -1.4
SCAF11-212ENST00000549162 FLAD1Q8NFF5 587 aa6.29□□□□□ -1.4
SCAF11-212ENST00000549162 GCC1Q96CN9 775 aa6.29□□□□□ -1.4
SCAF11-212ENST00000549162 MRS2Q9HD23 443 aa6.29□□□□□ -1.4
SCAF11-212ENST00000549162 TATP17735 454 aaPredicted RBP6.29□□□□□ -1.4
SCAF11-212ENST00000549162 TMC1Q8TDI8 760 aa6.29□□□□□ -1.4
SCAF11-212ENST00000549162 RFX5P48382 616 aaPredicted RBP6.28□□□□□ -1.4
SCAF11-212ENST00000549162 TSGA10IPQ3SY00 556 aa6.28□□□□□ -1.4
SCAF11-212ENST00000549162 ESCO1Q5FWF5 840 aa6.28□□□□□ -1.4
SCAF11-212ENST00000549162 BEND3Q5T5X7 828 aa6.28□□□□□ -1.4
SCAF11-212ENST00000549162 PARP9Q8IXQ6 854 aa6.28□□□□□ -1.4
SCAF11-212ENST00000549162 NGDNQ8NEJ9 315 aaKnown RBP6.28□□□□□ -1.4
SCAF11-212ENST00000549162 CCDC97Q96F63 343 aaPredicted RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms