RNA–Protein interactions for RNA: ENST00000549061.5

ERBB3-207, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 4

Gene ERBB3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-207ENST00000549061 PHACTR3Q96KR7 559 aa19.51■□□□□ 0.71
ERBB3-207ENST00000549061 USP16Q9Y5T5 823 aa19.51■□□□□ 0.71
ERBB3-207ENST00000549061 NPC1L1Q9UHC9 1359 aa19.51■□□□□ 0.71
ERBB3-207ENST00000549061 U2SURPO15042 1029 aaKnown RBP19.5■□□□□ 0.71
ERBB3-207ENST00000549061 PRPF40BQ6NWY9 871 aaKnown RBP19.5■□□□□ 0.71
ERBB3-207ENST00000549061 CREBZFQ9NS37 354 aa19.5■□□□□ 0.71
ERBB3-207ENST00000549061 BCORQ6W2J9 1755 aa19.49■□□□□ 0.71
ERBB3-207ENST00000549061 ARFGEF2Q9Y6D5 1785 aa19.49■□□□□ 0.71
ERBB3-207ENST00000549061 MASTLQ96GX5 879 aa19.49■□□□□ 0.71
ERBB3-207ENST00000549061 CACNA1SQ13698 1873 aa19.49■□□□□ 0.71
ERBB3-207ENST00000549061 KLRG2A4D1S0 409 aaPredicted RBP19.48■□□□□ 0.71
ERBB3-207ENST00000549061 CLEC4GQ6UXB4 293 aa19.48■□□□□ 0.71
ERBB3-207ENST00000549061 DZIP3Q86Y13 1208 aaKnown RBP19.48■□□□□ 0.71
ERBB3-207ENST00000549061 PRAMEF22A3QJZ6 481 aa19.47■□□□□ 0.71
ERBB3-207ENST00000549061 BTBD11A6QL63 1104 aa19.47■□□□□ 0.71
ERBB3-207ENST00000549061 PIP4K2AP48426 406 aaPredicted RBP19.47■□□□□ 0.71
ERBB3-207ENST00000549061 L3MBTL3Q96JM7 780 aaPredicted RBP19.47■□□□□ 0.71
ERBB3-207ENST00000549061 PASKQ96RG2 1323 aa19.47■□□□□ 0.71
ERBB3-207ENST00000549061 ST5P78524 1137 aa19.46■□□□□ 0.71
ERBB3-207ENST00000549061 SOGA3Q5TF21 947 aa19.46■□□□□ 0.71
ERBB3-207ENST00000549061 CCER1Q8TC90 406 aaPredicted RBP19.46■□□□□ 0.71
ERBB3-207ENST00000549061 RSPH6AQ9H0K4 717 aa19.46■□□□□ 0.71
ERBB3-207ENST00000549061 MKRN1Q9UHC7 482 aaKnown RBP19.45■□□□□ 0.7
ERBB3-207ENST00000549061 SCN4AP35499 1836 aa19.45■□□□□ 0.7
ERBB3-207ENST00000549061 ITGBL1O95965 494 aaPredicted RBP19.44■□□□□ 0.7
ERBB3-207ENST00000549061 PRKAR2BP31323 418 aa19.44■□□□□ 0.7
ERBB3-207ENST00000549061 NPM2Q86SE8 214 aaKnown RBP19.44■□□□□ 0.7
ERBB3-207ENST00000549061 TAF1DQ9H5J8 278 aaPredicted RBP19.44■□□□□ 0.7
ERBB3-207ENST00000549061 NBPF26B4DH59 902 aa19.43■□□□□ 0.7
ERBB3-207ENST00000549061 NBPF10Q6P3W6 841 aaKnown RBP19.43■□□□□ 0.7
ERBB3-207ENST00000549061 NBPF15Q8N660 670 aa19.43■□□□□ 0.7
ERBB3-207ENST00000549061 IQCA1LA6NCM1 817 aa19.42■□□□□ 0.7
ERBB3-207ENST00000549061 NPHP1O15259 732 aa19.42■□□□□ 0.7
ERBB3-207ENST00000549061 SNRPA1P09661 255 aaKnown RBP19.42■□□□□ 0.7
ERBB3-207ENST00000549061 NPR1P16066 1061 aa19.42■□□□□ 0.7
ERBB3-207ENST00000549061 OLFM4Q6UX06 510 aa19.42■□□□□ 0.7
ERBB3-207ENST00000549061 LDHDQ86WU2 507 aa19.42■□□□□ 0.7
ERBB3-207ENST00000549061 NBPF5PQ86XG9 351 aaPredicted RBP19.42■□□□□ 0.7
ERBB3-207ENST00000549061 CNTNAP1P78357 1384 aa19.42■□□□□ 0.7
ERBB3-207ENST00000549061 RGL2O15211 777 aa19.41■□□□□ 0.7
ERBB3-207ENST00000549061 CCDC93Q567U6 631 aa19.41■□□□□ 0.7
ERBB3-207ENST00000549061 FOXN1O15353 648 aa19.4■□□□□ 0.7
ERBB3-207ENST00000549061 FKBP4Q02790 459 aaKnown RBP eCLIP19.4■□□□□ 0.7
ERBB3-207ENST00000549061 CNGB1Q14028 1251 aaPredicted RBP19.4■□□□□ 0.7
ERBB3-207ENST00000549061 TPTE2Q6XPS3 522 aa19.4■□□□□ 0.7
ERBB3-207ENST00000549061 ZNF541Q9H0D2 1346 aa19.4■□□□□ 0.7
ERBB3-207ENST00000549061 ADAMTSL1Q8N6G6 1762 aa19.39■□□□□ 0.7
ERBB3-207ENST00000549061 MCM10Q7L590 875 aa19.39■□□□□ 0.69
ERBB3-207ENST00000549061 ZNF277Q9NRM2 450 aaPredicted RBP19.39■□□□□ 0.69
ERBB3-207ENST00000549061 FZD9O00144 591 aa19.38■□□□□ 0.69
ERBB3-207ENST00000549061 HLFQ16534 295 aa19.38■□□□□ 0.69
ERBB3-207ENST00000549061 NIP7Q9Y221 180 aaKnown RBP eCLIP19.38■□□□□ 0.69
ERBB3-207ENST00000549061 ZNF652Q9Y2D9 606 aa19.38■□□□□ 0.69
ERBB3-207ENST00000549061 SNED1Q8TER0 1413 aa19.37■□□□□ 0.69
ERBB3-207ENST00000549061 VEGFBP49765 207 aa19.37■□□□□ 0.69
ERBB3-207ENST00000549061 DCTN1Q14203 1278 aa19.37■□□□□ 0.69
ERBB3-207ENST00000549061 RTKN2Q8IZC4 609 aa19.37■□□□□ 0.69
ERBB3-207ENST00000549061 TMEM88BA6NKF7 163 aa19.36■□□□□ 0.69
ERBB3-207ENST00000549061 PRDM10Q9NQV6 1147 aa19.36■□□□□ 0.69
ERBB3-207ENST00000549061 ALDH1B1P30837 517 aa19.35■□□□□ 0.69
ERBB3-207ENST00000549061 HACL1Q9UJ83 578 aa19.35■□□□□ 0.69
ERBB3-207ENST00000549061 HTATSF1O43719 755 aaKnown RBP19.34■□□□□ 0.69
ERBB3-207ENST00000549061 EPHX2P34913 555 aa19.34■□□□□ 0.69
ERBB3-207ENST00000549061 IARSP41252 1262 aaKnown RBP19.34■□□□□ 0.69
ERBB3-207ENST00000549061 CRY2Q49AN0 593 aa19.34■□□□□ 0.69
ERBB3-207ENST00000549061 SYNE4Q8N205 404 aa19.34■□□□□ 0.69
ERBB3-207ENST00000549061 RTF1Q92541 710 aaKnown RBP19.34■□□□□ 0.69
ERBB3-207ENST00000549061 CFAP53Q96M91 514 aa19.34■□□□□ 0.69
ERBB3-207ENST00000549061 WBP1LQ9NX94 342 aa19.34■□□□□ 0.69
ERBB3-207ENST00000549061 FAM177BA6PVY3 158 aa19.33■□□□□ 0.68
ERBB3-207ENST00000549061 U2AF1L5P0DN76 240 aaPredicted RBP19.33■□□□□ 0.68
ERBB3-207ENST00000549061 U2AF1Q01081 240 aaKnown RBP eCLIP19.33■□□□□ 0.68
ERBB3-207ENST00000549061 EAPPQ56P03 285 aaPredicted RBP19.33■□□□□ 0.68
ERBB3-207ENST00000549061 NUDCQ9Y266 331 aa19.33■□□□□ 0.68
ERBB3-207ENST00000549061 RNF123Q5XPI4 1314 aa19.32■□□□□ 0.68
ERBB3-207ENST00000549061 RASSF10A6NK89 507 aa19.32■□□□□ 0.68
ERBB3-207ENST00000549061 TAF7Q15545 349 aaPredicted RBP19.32■□□□□ 0.68
ERBB3-207ENST00000549061 PNMA8AQ86V59 439 aaPredicted RBP19.32■□□□□ 0.68
ERBB3-207ENST00000549061 CNTROBQ8N137 903 aa19.32■□□□□ 0.68
ERBB3-207ENST00000549061 GPC2Q8N158 579 aa19.32■□□□□ 0.68
ERBB3-207ENST00000549061 PSMD1Q99460 953 aa19.32■□□□□ 0.68
ERBB3-207ENST00000549061 MIS18AQ9NYP9 233 aa19.32■□□□□ 0.68
ERBB3-207ENST00000549061 COL4A5P29400 1685 aa19.31■□□□□ 0.68
ERBB3-207ENST00000549061 PPP2R1AP30153 589 aa19.31■□□□□ 0.68
ERBB3-207ENST00000549061 MAP1SQ66K74 1059 aaPredicted RBP19.31■□□□□ 0.68
ERBB3-207ENST00000549061 NUP98P52948 1817 aa19.3■□□□□ 0.68
ERBB3-207ENST00000549061 ERVV-1B6SEH8 477 aa19.3■□□□□ 0.68
ERBB3-207ENST00000549061 CTCFP49711 727 aaPredicted RBP19.3■□□□□ 0.68
ERBB3-207ENST00000549061 CLEC11AQ9Y240 323 aa19.3■□□□□ 0.68
ERBB3-207ENST00000549061 ABCC12Q96J65 1359 aa19.3■□□□□ 0.68
ERBB3-207ENST00000549061 HOXA10P31260 410 aaPredicted RBP19.29■□□□□ 0.68
ERBB3-207ENST00000549061 DEFB115Q30KQ5 88 aa19.29■□□□□ 0.68
ERBB3-207ENST00000549061 NUTM1Q86Y26 1132 aa19.29■□□□□ 0.68
ERBB3-207ENST00000549061 LTBP1Q14766 1721 aa19.28■□□□□ 0.68
ERBB3-207ENST00000549061 LAMB4A4D0S4 1761 aa19.27■□□□□ 0.68
ERBB3-207ENST00000549061 GTF2E1P29083 439 aaPredicted RBP19.27■□□□□ 0.68
ERBB3-207ENST00000549061 LBX1P52954 281 aa19.27■□□□□ 0.68
ERBB3-207ENST00000549061 CC2D2BQ6DHV5 1058 aa19.27■□□□□ 0.68
ERBB3-207ENST00000549061 NYXQ9GZU5 481 aa19.27■□□□□ 0.68
ERBB3-207ENST00000549061 TTLL7Q6ZT98 887 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms