RNA–Protein interactions for RNA: ENST00000548570.1

APP-217, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 361 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-217ENST00000548570 ZNF496Q96IT1 587 aaPredicted RBP6.55□□□□□ -1.36
APP-217ENST00000548570 LRRC4BQ9NT99 713 aa6.55□□□□□ -1.36
APP-217ENST00000548570 IFT57Q9NWB7 429 aa6.55□□□□□ -1.36
APP-217ENST00000548570 TMOD3Q9NYL9 352 aa6.55□□□□□ -1.36
APP-217ENST00000548570 NUDT7P0C024 238 aa6.54□□□□□ -1.36
APP-217ENST00000548570 TEFQ10587 303 aa6.54□□□□□ -1.36
APP-217ENST00000548570 AMIGO3Q86WK7 504 aa6.54□□□□□ -1.36
APP-217ENST00000548570 TMC2Q8TDI7 906 aa6.54□□□□□ -1.36
APP-217ENST00000548570 UPF1Q92900 1129 aaKnown RBP eCLIP6.54□□□□□ -1.36
APP-217ENST00000548570 KHSRPQ92945 711 aaKnown RBP eCLIP6.54□□□□□ -1.36
APP-217ENST00000548570 CAMKK2Q96RR4 588 aa6.54□□□□□ -1.36
APP-217ENST00000548570 BABAM1Q9NWV8 329 aa6.54□□□□□ -1.36
APP-217ENST00000548570 PALLDQ8WX93 1383 aa6.54□□□□□ -1.36
APP-217ENST00000548570 PTCD1O75127 700 aaKnown RBP6.53□□□□□ -1.36
APP-217ENST00000548570 GIGYF1O75420 1035 aaPredicted RBP6.53□□□□□ -1.36
APP-217ENST00000548570 GNAI1P63096 354 aa6.53□□□□□ -1.36
APP-217ENST00000548570 EXOSC9Q06265 439 aaKnown RBP6.53□□□□□ -1.36
APP-217ENST00000548570 ERICH6Q7L0X2 663 aa6.53□□□□□ -1.36
APP-217ENST00000548570 LRP10Q7Z4F1 713 aa6.53□□□□□ -1.36
APP-217ENST00000548570 DEFB132Q7Z7B7 95 aa6.53□□□□□ -1.36
APP-217ENST00000548570 RNF25Q96BH1 459 aaPredicted RBP6.53□□□□□ -1.36
APP-217ENST00000548570 TSPYL4Q9UJ04 414 aa6.53□□□□□ -1.36
APP-217ENST00000548570 LAS1LQ9Y4W2 734 aaKnown RBP6.53□□□□□ -1.36
APP-217ENST00000548570 USP16Q9Y5T5 823 aa6.53□□□□□ -1.36
APP-217ENST00000548570 STK24Q9Y6E0 443 aa6.53□□□□□ -1.36
APP-217ENST00000548570 BRWD3Q6RI45 1802 aa6.53□□□□□ -1.36
APP-217ENST00000548570 LOC102724428A0A0B4J2F2 783 aa6.52□□□□□ -1.37
APP-217ENST00000548570 NBPF26B4DH59 902 aa6.52□□□□□ -1.37
APP-217ENST00000548570 E9PSI1 815 aa6.52□□□□□ -1.37
APP-217ENST00000548570 PLSCR1O15162 318 aa6.52□□□□□ -1.37
APP-217ENST00000548570 VAMP4O75379 141 aa6.52□□□□□ -1.37
APP-217ENST00000548570 SLC34A2O95436 690 aa6.52□□□□□ -1.37
APP-217ENST00000548570 APBA3O96018 575 aa6.52□□□□□ -1.37
APP-217ENST00000548570 SIK1P57059 783 aa6.52□□□□□ -1.37
APP-217ENST00000548570 PLCB2Q00722 1185 aa6.52□□□□□ -1.37
APP-217ENST00000548570 EN1Q05925 392 aaPredicted RBP6.52□□□□□ -1.37
APP-217ENST00000548570 PDIA6Q15084 440 aa6.52□□□□□ -1.37
APP-217ENST00000548570 EZH2Q15910 746 aaKnown RBP6.52□□□□□ -1.37
APP-217ENST00000548570 NBPF14Q5TI25 921 aa6.52□□□□□ -1.37
APP-217ENST00000548570 NBPF10Q6P3W6 841 aaKnown RBP6.52□□□□□ -1.37
APP-217ENST00000548570 SMIM5Q71RC9 77 aa6.52□□□□□ -1.37
APP-217ENST00000548570 DNAJC10Q8IXB1 793 aa6.52□□□□□ -1.37
APP-217ENST00000548570 NBPF15Q8N660 670 aa6.52□□□□□ -1.37
APP-217ENST00000548570 LINC00116Q8NCU8 138 aa6.52□□□□□ -1.37
APP-217ENST00000548570 NHSQ6T4R5 1651 aa6.52□□□□□ -1.37
APP-217ENST00000548570 PAPPAQ13219 1627 aa6.51□□□□□ -1.37
APP-217ENST00000548570 DOT1LQ8TEK3 1739 aa6.51□□□□□ -1.37
APP-217ENST00000548570 C2orf72A6NCS6 295 aa6.51□□□□□ -1.37
APP-217ENST00000548570 ELL2O00472 640 aaPredicted RBP6.51□□□□□ -1.37
APP-217ENST00000548570 ARHGAP33O14559 1287 aa6.51□□□□□ -1.37
APP-217ENST00000548570 CYP19A1P11511 503 aaPredicted RBP6.51□□□□□ -1.37
APP-217ENST00000548570 PRKCSHP14314 528 aaPredicted RBP6.51□□□□□ -1.37
APP-217ENST00000548570 CALD1Q05682 793 aaKnown RBP6.51□□□□□ -1.37
APP-217ENST00000548570 TXNRD1Q16881 649 aa6.51□□□□□ -1.37
APP-217ENST00000548570 ZNF827Q17R98 1081 aa6.51□□□□□ -1.37
APP-217ENST00000548570 PROSER3Q2NL68 480 aa6.51□□□□□ -1.37
APP-217ENST00000548570 INTS5Q6P9B9 1019 aaKnown RBP6.51□□□□□ -1.37
APP-217ENST00000548570 FBXO22Q8NEZ5 403 aa6.51□□□□□ -1.37
APP-217ENST00000548570 LHX6Q9UPM6 363 aa6.51□□□□□ -1.37
APP-217ENST00000548570 PCDHGA4Q9Y5G9 962 aa6.51□□□□□ -1.37
APP-217ENST00000548570 SIPA1L3O60292 1781 aaPredicted RBP6.5□□□□□ -1.37
APP-217ENST00000548570 STK25O00506 426 aa6.5□□□□□ -1.37
APP-217ENST00000548570 PIP4K2AP48426 406 aaPredicted RBP6.5□□□□□ -1.37
APP-217ENST00000548570 VSIG10Q8N0Z9 540 aa6.5□□□□□ -1.37
APP-217ENST00000548570 SMARCC1Q92922 1105 aaPredicted RBP6.5□□□□□ -1.37
APP-217ENST00000548570 FMNL2Q96PY5 1086 aa6.5□□□□□ -1.37
APP-217ENST00000548570 MYH16Q9H6N6 1097 aa6.5□□□□□ -1.37
APP-217ENST00000548570 ANO8Q9HCE9 1232 aaPredicted RBP6.5□□□□□ -1.37
APP-217ENST00000548570 SCN11AQ9UI33 1791 aa6.49□□□□□ -1.37
APP-217ENST00000548570 TCERG1O14776 1098 aaKnown RBP6.49□□□□□ -1.37
APP-217ENST00000548570 KIF3CO14782 793 aa6.49□□□□□ -1.37
APP-217ENST00000548570 ANXA1P04083 346 aa6.49□□□□□ -1.37
APP-217ENST00000548570 A1BGP04217 495 aa6.49□□□□□ -1.37
APP-217ENST00000548570 SNRPA1P09661 255 aaKnown RBP6.49□□□□□ -1.37
APP-217ENST00000548570 ATP6V1AP38606 617 aa6.49□□□□□ -1.37
APP-217ENST00000548570 TWISTNBQ3B726 338 aaPredicted RBP6.49□□□□□ -1.37
APP-217ENST00000548570 ADGRD1Q6QNK2 874 aa6.49□□□□□ -1.37
APP-217ENST00000548570 TTC5Q8N0Z6 440 aa6.49□□□□□ -1.37
APP-217ENST00000548570 NECTIN2Q92692 538 aa6.49□□□□□ -1.37
APP-217ENST00000548570 CCNL1Q9UK58 526 aaPredicted RBP6.49□□□□□ -1.37
APP-217ENST00000548570 ZBTB1Q9Y2K1 713 aa6.49□□□□□ -1.37
APP-217ENST00000548570 TNS1Q9HBL0 1735 aaKnown RBP6.49□□□□□ -1.37
APP-217ENST00000548570 HOXB7P09629 217 aa6.48□□□□□ -1.37
APP-217ENST00000548570 CRKLP46109 303 aaKnown RBP6.48□□□□□ -1.37
APP-217ENST00000548570 RARSP54136 660 aaKnown RBP6.48□□□□□ -1.37
APP-217ENST00000548570 G2E3Q7L622 706 aa6.48□□□□□ -1.37
APP-217ENST00000548570 CCDC125Q86Z20 511 aa6.48□□□□□ -1.37
APP-217ENST00000548570 SSH1Q8WYL5 1049 aa6.48□□□□□ -1.37
APP-217ENST00000548570 KDM3BQ7LBC6 1761 aa6.47□□□□□ -1.37
APP-217ENST00000548570 DLG5Q8TDM6 1919 aa6.47□□□□□ -1.37
APP-217ENST00000548570 TK2O00142 265 aa6.47□□□□□ -1.37
APP-217ENST00000548570 BCAR3O75815 825 aa6.47□□□□□ -1.37
APP-217ENST00000548570 EIF2S2P20042 333 aaKnown RBP6.47□□□□□ -1.37
APP-217ENST00000548570 EIF5P55010 431 aaKnown RBP6.47□□□□□ -1.37
APP-217ENST00000548570 SLC27A3Q5K4L6 730 aa6.47□□□□□ -1.37
APP-217ENST00000548570 HDGFL1Q5TGJ6 251 aa6.47□□□□□ -1.37
APP-217ENST00000548570 MRPL50Q8N5N7 158 aaKnown RBP6.47□□□□□ -1.37
APP-217ENST00000548570 MFRPQ9BY79 579 aa6.47□□□□□ -1.37
APP-217ENST00000548570 PDGFDQ9GZP0 370 aaPredicted RBP6.47□□□□□ -1.37
APP-217ENST00000548570 PHAXQ9H814 394 aaKnown RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms