RNA–Protein interactions for RNA: ENST00000548316.1

PDZRN4-204, Transcript of PDZ domain containing ring finger 4, humanhuman

TSL 1 (best)

Gene PDZRN4, Length 2,971 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4-204ENST00000548316 PRIM1P49642 420 aaKnown RBP8.67□□□□□ -1.02
PDZRN4-204ENST00000548316 CAVIN1Q6NZI2 390 aaKnown RBP8.67□□□□□ -1.02
PDZRN4-204ENST00000548316 ZNF530Q6P9A1 599 aaPredicted RBP8.67□□□□□ -1.02
PDZRN4-204ENST00000548316 KSR2Q6VAB6 950 aa8.67□□□□□ -1.02
PDZRN4-204ENST00000548316 RUFY3Q7L099 469 aa8.67□□□□□ -1.02
PDZRN4-204ENST00000548316 CHMP4AQ9BY43 222 aa8.67□□□□□ -1.02
PDZRN4-204ENST00000548316 SURF6O75683 361 aaKnown RBP8.67□□□□□ -1.02
PDZRN4-204ENST00000548316 GCP02774 474 aa8.67□□□□□ -1.02
PDZRN4-204ENST00000548316 KLHL34Q8N239 644 aa8.67□□□□□ -1.02
PDZRN4-204ENST00000548316 TM6SF1Q9BZW5 370 aa8.67□□□□□ -1.02
PDZRN4-204ENST00000548316 DBF4Q9UBU7 674 aaPredicted RBP8.67□□□□□ -1.02
PDZRN4-204ENST00000548316 AXIN2Q9Y2T1 843 aa8.67□□□□□ -1.02
PDZRN4-204ENST00000548316 BTBD11A6QL63 1104 aa8.66□□□□□ -1.02
PDZRN4-204ENST00000548316 SRGAP3O43295 1099 aa8.66□□□□□ -1.02
PDZRN4-204ENST00000548316 RILPL2Q969X0 211 aa8.66□□□□□ -1.02
PDZRN4-204ENST00000548316 ANO2Q9NQ90 1003 aa8.66□□□□□ -1.02
PDZRN4-204ENST00000548316 MED23Q9ULK4 1368 aa8.66□□□□□ -1.02
PDZRN4-204ENST00000548316 MBD3O95983 291 aa8.66□□□□□ -1.02
PDZRN4-204ENST00000548316 HSP90AB4PQ58FF6 505 aa8.66□□□□□ -1.02
PDZRN4-204ENST00000548316 ALDH8A1Q9H2A2 487 aaPredicted RBP8.66□□□□□ -1.02
PDZRN4-204ENST00000548316 SPEF2Q9C093 1822 aa8.66□□□□□ -1.02
PDZRN4-204ENST00000548316 PRAMEF22A3QJZ6 481 aa8.65□□□□□ -1.02
PDZRN4-204ENST00000548316 TRIM6-TRIM34B2RNG4 842 aa8.65□□□□□ -1.02
PDZRN4-204ENST00000548316 SASH1O94885 1247 aa8.65□□□□□ -1.02
PDZRN4-204ENST00000548316 ANXA1P04083 346 aa8.65□□□□□ -1.02
PDZRN4-204ENST00000548316 NECTIN1Q15223 517 aa8.65□□□□□ -1.02
PDZRN4-204ENST00000548316 ANKRD24Q8TF21 1146 aa8.65□□□□□ -1.02
PDZRN4-204ENST00000548316 ARXQ96QS3 562 aa8.65□□□□□ -1.02
PDZRN4-204ENST00000548316 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.65□□□□□ -1.02
PDZRN4-204ENST00000548316 DCCP43146 1447 aa8.65□□□□□ -1.02
PDZRN4-204ENST00000548316 GLRX3O76003 335 aaKnown RBP8.65□□□□□ -1.02
PDZRN4-204ENST00000548316 IGKV5-2P06315 115 aa8.65□□□□□ -1.02
PDZRN4-204ENST00000548316 PTH1RQ03431 593 aa8.65□□□□□ -1.02
PDZRN4-204ENST00000548316 MPRIPQ6WCQ1 1025 aa8.65□□□□□ -1.02
PDZRN4-204ENST00000548316 SUCLG2Q96I99 432 aa8.65□□□□□ -1.02
PDZRN4-204ENST00000548316 ZSWIM6Q9HCJ5 1215 aa8.65□□□□□ -1.02
PDZRN4-204ENST00000548316 MAP3K2Q9Y2U5 619 aa8.65□□□□□ -1.02
PDZRN4-204ENST00000548316 TOGARAM1Q9Y4F4 1720 aa8.65□□□□□ -1.03
PDZRN4-204ENST00000548316 CNTROBQ8N137 903 aa8.64□□□□□ -1.03
PDZRN4-204ENST00000548316 ORAI2Q96SN7 254 aa8.64□□□□□ -1.03
PDZRN4-204ENST00000548316 DDX21Q9NR30 783 aaKnown RBP eCLIP8.64□□□□□ -1.03
PDZRN4-204ENST00000548316 HYPKQ9NX55 129 aa8.64□□□□□ -1.03
PDZRN4-204ENST00000548316 ZNF500O60304 480 aaPredicted RBP8.64□□□□□ -1.03
PDZRN4-204ENST00000548316 GADD45BO75293 160 aaPredicted RBP8.64□□□□□ -1.03
PDZRN4-204ENST00000548316 LARGE1O95461 756 aa8.64□□□□□ -1.03
PDZRN4-204ENST00000548316 EIF2S2P20042 333 aaKnown RBP8.64□□□□□ -1.03
PDZRN4-204ENST00000548316 RFX5P48382 616 aaPredicted RBP8.64□□□□□ -1.03
PDZRN4-204ENST00000548316 AK2P54819 239 aa8.64□□□□□ -1.03
PDZRN4-204ENST00000548316 ZSCAN30Q86W11 494 aa8.64□□□□□ -1.03
PDZRN4-204ENST00000548316 UPF3BQ9BZI7 483 aaKnown RBP8.64□□□□□ -1.03
PDZRN4-204ENST00000548316 ERBB3P21860 1342 aa8.64□□□□□ -1.03
PDZRN4-204ENST00000548316 KCPQ6ZWJ8 1503 aa8.64□□□□□ -1.03
PDZRN4-204ENST00000548316 MAP4K4O95819 1239 aaPredicted RBP8.64□□□□□ -1.03
PDZRN4-204ENST00000548316 LINS1Q8NG48 757 aa8.64□□□□□ -1.03
PDZRN4-204ENST00000548316 FUCA2Q9BTY2 467 aa8.64□□□□□ -1.03
PDZRN4-204ENST00000548316 ECHDC1Q9NTX5 307 aa8.64□□□□□ -1.03
PDZRN4-204ENST00000548316 WDR33Q9C0J8 1336 aaKnown RBP8.64□□□□□ -1.03
PDZRN4-204ENST00000548316 RFX7Q2KHR2 1363 aa8.64□□□□□ -1.03
PDZRN4-204ENST00000548316 NWD2Q9ULI1 1742 aa8.63□□□□□ -1.03
PDZRN4-204ENST00000548316 ESCO1Q5FWF5 840 aa8.63□□□□□ -1.03
PDZRN4-204ENST00000548316 NOL7Q9UMY1 257 aaKnown RBP8.63□□□□□ -1.03
PDZRN4-204ENST00000548316 CASP7P55210 303 aa8.63□□□□□ -1.03
PDZRN4-204ENST00000548316 PSME1Q06323 249 aa8.63□□□□□ -1.03
PDZRN4-204ENST00000548316 VPS53Q5VIR6 699 aa8.63□□□□□ -1.03
PDZRN4-204ENST00000548316 ERC1Q8IUD2 1116 aa8.63□□□□□ -1.03
PDZRN4-204ENST00000548316 GRM8O00222 908 aa8.62□□□□□ -1.03
PDZRN4-204ENST00000548316 OFD1O75665 1012 aa8.62□□□□□ -1.03
PDZRN4-204ENST00000548316 TEFQ10587 303 aa8.62□□□□□ -1.03
PDZRN4-204ENST00000548316 COL9A3Q14050 684 aaPredicted RBP8.62□□□□□ -1.03
PDZRN4-204ENST00000548316 TSGA10IPQ3SY00 556 aa8.62□□□□□ -1.03
PDZRN4-204ENST00000548316 USP48Q86UV5 1035 aa8.62□□□□□ -1.03
PDZRN4-204ENST00000548316 MAP4K1Q92918 833 aa8.62□□□□□ -1.03
PDZRN4-204ENST00000548316 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.62□□□□□ -1.03
PDZRN4-204ENST00000548316 LIMCH1Q9UPQ0 1083 aa8.62□□□□□ -1.03
PDZRN4-204ENST00000548316 PA2G4Q9UQ80 394 aaKnown RBP8.62□□□□□ -1.03
PDZRN4-204ENST00000548316 CCDC171Q6TFL3 1326 aa8.62□□□□□ -1.03
PDZRN4-204ENST00000548316 ZSCAN22P10073 491 aaPredicted RBP8.62□□□□□ -1.03
PDZRN4-204ENST00000548316 TERF1P54274 439 aa8.62□□□□□ -1.03
PDZRN4-204ENST00000548316 CWF19L2Q2TBE0 894 aaKnown RBP8.62□□□□□ -1.03
PDZRN4-204ENST00000548316 ADCK5Q3MIX3 580 aa8.62□□□□□ -1.03
PDZRN4-204ENST00000548316 EAF2Q96CJ1 260 aaPredicted RBP8.62□□□□□ -1.03
PDZRN4-204ENST00000548316 EVI5LQ96CN4 794 aa8.62□□□□□ -1.03
PDZRN4-204ENST00000548316 MYH7P12883 1935 aa8.62□□□□□ -1.03
PDZRN4-204ENST00000548316 SYCE3A1L190 88 aa8.61□□□□□ -1.03
PDZRN4-204ENST00000548316 RABL6Q3YEC7 729 aaPredicted RBP8.61□□□□□ -1.03
PDZRN4-204ENST00000548316 USPL1Q5W0Q7 1092 aa8.61□□□□□ -1.03
PDZRN4-204ENST00000548316 RBM33Q96EV2 1170 aaKnown RBP8.61□□□□□ -1.03
PDZRN4-204ENST00000548316 MTMR6Q9Y217 621 aa8.61□□□□□ -1.03
PDZRN4-204ENST00000548316 NPHP3Q7Z494 1330 aa8.61□□□□□ -1.03
PDZRN4-204ENST00000548316 NEURL1BA8MQ27 555 aa8.61□□□□□ -1.03
PDZRN4-204ENST00000548316 EPHA10Q5JZY3 1008 aa8.61□□□□□ -1.03
PDZRN4-204ENST00000548316 BICC1Q9H694 974 aaKnown RBP8.61□□□□□ -1.03
PDZRN4-204ENST00000548316 SLC52A2Q9HAB3 445 aa8.61□□□□□ -1.03
PDZRN4-204ENST00000548316 CPDO75976 1380 aa8.61□□□□□ -1.03
PDZRN4-204ENST00000548316 F13A1P00488 732 aa8.61□□□□□ -1.03
PDZRN4-204ENST00000548316 PHKG2P15735 406 aa8.61□□□□□ -1.03
PDZRN4-204ENST00000548316 SYT1P21579 422 aa8.61□□□□□ -1.03
PDZRN4-204ENST00000548316 MCM5P33992 734 aa8.6□□□□□ -1.03
PDZRN4-204ENST00000548316 KRT28Q7Z3Y7 464 aa8.6□□□□□ -1.03
PDZRN4-204ENST00000548316 METTL22Q9BUU2 404 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms