RNA–Protein interactions for RNA: ENST00000548220.1

PTPRR-207, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 2

Gene PTPRR, Length 1,374 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-207ENST00000548220 YTHDC1Q96MU7 727 aaKnown RBP8.1□□□□□ -1.11
PTPRR-207ENST00000548220 MYH16Q9H6N6 1097 aa8.1□□□□□ -1.11
PTPRR-207ENST00000548220 CCDC9Q9Y3X0 531 aaKnown RBP8.1□□□□□ -1.11
PTPRR-207ENST00000548220 MRC1P22897 1456 aa8.1□□□□□ -1.11
PTPRR-207ENST00000548220 CHL1O00533 1208 aa8.1□□□□□ -1.11
PTPRR-207ENST00000548220 RXRBP28702 533 aa8.1□□□□□ -1.11
PTPRR-207ENST00000548220 TAF7Q15545 349 aaPredicted RBP8.1□□□□□ -1.11
PTPRR-207ENST00000548220 RNMTO43148 476 aaKnown RBP8.09□□□□□ -1.12
PTPRR-207ENST00000548220 PTPREP23469 700 aa8.09□□□□□ -1.12
PTPRR-207ENST00000548220 PDE4AP27815 886 aa8.09□□□□□ -1.12
PTPRR-207ENST00000548220 SLFN5Q08AF3 891 aa8.09□□□□□ -1.12
PTPRR-207ENST00000548220 IL17REQ8NFR9 667 aa8.09□□□□□ -1.12
PTPRR-207ENST00000548220 USP35Q9P2H5 1018 aa8.09□□□□□ -1.12
PTPRR-207ENST00000548220 ZNF831Q5JPB2 1677 aa8.08□□□□□ -1.12
PTPRR-207ENST00000548220 ITGB4P16144 1822 aa8.08□□□□□ -1.12
PTPRR-207ENST00000548220 HOXB7P09629 217 aa8.08□□□□□ -1.12
PTPRR-207ENST00000548220 TEFQ10587 303 aa8.08□□□□□ -1.12
PTPRR-207ENST00000548220 FAM98CQ17RN3 349 aaKnown RBP8.08□□□□□ -1.12
PTPRR-207ENST00000548220 FAM196AQ6ZSG2 479 aa8.08□□□□□ -1.12
PTPRR-207ENST00000548220 SLC52A2Q9HAB3 445 aa8.08□□□□□ -1.12
PTPRR-207ENST00000548220 SBF2Q86WG5 1849 aa8.07□□□□□ -1.12
PTPRR-207ENST00000548220 GOLGA8CPA6NN73 597 aa8.07□□□□□ -1.12
PTPRR-207ENST00000548220 GTPBP6O43824 516 aaPredicted RBP8.07□□□□□ -1.12
PTPRR-207ENST00000548220 FOSBP53539 338 aa8.07□□□□□ -1.12
PTPRR-207ENST00000548220 NEUROD2Q15784 382 aa8.07□□□□□ -1.12
PTPRR-207ENST00000548220 SEPT12Q8IYM1 358 aa8.07□□□□□ -1.12
PTPRR-207ENST00000548220 MARCH10Q8NA82 808 aaPredicted RBP8.07□□□□□ -1.12
PTPRR-207ENST00000548220 GTF3C3Q9Y5Q9 886 aa8.07□□□□□ -1.12
PTPRR-207ENST00000548220 KDM3BQ7LBC6 1761 aa8.07□□□□□ -1.12
PTPRR-207ENST00000548220 KDM6AO15550 1401 aaPredicted RBP8.06□□□□□ -1.12
PTPRR-207ENST00000548220 BRWD3Q6RI45 1802 aa8.06□□□□□ -1.12
PTPRR-207ENST00000548220 PTPN5P54829 565 aa8.06□□□□□ -1.12
PTPRR-207ENST00000548220 CABP4P57796 275 aa8.06□□□□□ -1.12
PTPRR-207ENST00000548220 DUSP27Q5VZP5 1158 aa8.06□□□□□ -1.12
PTPRR-207ENST00000548220 DDX54Q8TDD1 881 aaKnown RBP8.06□□□□□ -1.12
PTPRR-207ENST00000548220 TEX13AQ9BXU3 409 aaPredicted RBP8.06□□□□□ -1.12
PTPRR-207ENST00000548220 HEG1Q9ULI3 1381 aa8.06□□□□□ -1.12
PTPRR-207ENST00000548220 RGS20O76081 388 aa8.05□□□□□ -1.12
PTPRR-207ENST00000548220 BRPF1P55201 1214 aaPredicted RBP8.05□□□□□ -1.12
PTPRR-207ENST00000548220 FAM182BQ5T319 152 aa8.05□□□□□ -1.12
PTPRR-207ENST00000548220 IFFO2Q5TF58 517 aa8.05□□□□□ -1.12
PTPRR-207ENST00000548220 MPRIPQ6WCQ1 1025 aa8.05□□□□□ -1.12
PTPRR-207ENST00000548220 KRT27Q7Z3Y8 459 aa8.05□□□□□ -1.12
PTPRR-207ENST00000548220 NFATC2IPQ8NCF5 419 aa8.05□□□□□ -1.12
PTPRR-207ENST00000548220 SMARCC1Q92922 1105 aaPredicted RBP8.05□□□□□ -1.12
PTPRR-207ENST00000548220 LGR6Q9HBX8 967 aa8.05□□□□□ -1.12
PTPRR-207ENST00000548220 TMOD3Q9NYL9 352 aa8.05□□□□□ -1.12
PTPRR-207ENST00000548220 RRP7AQ9Y3A4 280 aaKnown RBP8.05□□□□□ -1.12
PTPRR-207ENST00000548220 EP400Q96L91 3159 aa8.05□□□□□ -1.12
PTPRR-207ENST00000548220 CICQ96RK0 1608 aaPredicted RBP8.05□□□□□ -1.12
PTPRR-207ENST00000548220 UBR2Q8IWV8 1755 aa8.05□□□□□ -1.12
PTPRR-207ENST00000548220 BTBD11A6QL63 1104 aa8.04□□□□□ -1.12
PTPRR-207ENST00000548220 PAPPAQ13219 1627 aa8.04□□□□□ -1.12
PTPRR-207ENST00000548220 ZNF790Q6PG37 636 aa8.04□□□□□ -1.12
PTPRR-207ENST00000548220 NHSQ6T4R5 1651 aa8.04□□□□□ -1.12
PTPRR-207ENST00000548220 MCM10Q7L590 875 aa8.04□□□□□ -1.12
PTPRR-207ENST00000548220 NBPF3Q9H094 633 aa8.04□□□□□ -1.12
PTPRR-207ENST00000548220 ANO8Q9HCE9 1232 aaPredicted RBP8.04□□□□□ -1.12
PTPRR-207ENST00000548220 TOGARAM1Q9Y4F4 1720 aa8.03□□□□□ -1.12
PTPRR-207ENST00000548220 BHMG1C9JSJ3 638 aaPredicted RBP8.03□□□□□ -1.12
PTPRR-207ENST00000548220 ALDH1L2Q3SY69 923 aa8.03□□□□□ -1.12
PTPRR-207ENST00000548220 THSD4Q6ZMP0 1018 aa8.03□□□□□ -1.12
PTPRR-207ENST00000548220 CCDC125Q86Z20 511 aa8.03□□□□□ -1.12
PTPRR-207ENST00000548220 MRPL50Q8N5N7 158 aaKnown RBP8.03□□□□□ -1.12
PTPRR-207ENST00000548220 ZDHHC16Q969W1 377 aa8.03□□□□□ -1.12
PTPRR-207ENST00000548220 ZBED2Q9BTP6 218 aa8.03□□□□□ -1.12
PTPRR-207ENST00000548220 RGPD3A6NKT7 1758 aaPredicted RBP8.03□□□□□ -1.12
PTPRR-207ENST00000548220 RGPD4Q7Z3J3 1758 aa8.03□□□□□ -1.12
PTPRR-207ENST00000548220 DOT1LQ8TEK3 1739 aa8.03□□□□□ -1.12
PTPRR-207ENST00000548220 ERBB4Q15303 1308 aa8.02□□□□□ -1.13
PTPRR-207ENST00000548220 FANCIQ9NVI1 1328 aa8.02□□□□□ -1.13
PTPRR-207ENST00000548220 EVI5O60447 810 aa8.02□□□□□ -1.13
PTPRR-207ENST00000548220 TTC5Q8N0Z6 440 aa8.02□□□□□ -1.13
PTPRR-207ENST00000548220 WNT2BQ93097 391 aa8.02□□□□□ -1.13
PTPRR-207ENST00000548220 FMNL2Q96PY5 1086 aa8.02□□□□□ -1.13
PTPRR-207ENST00000548220 MBIPQ9NS73 344 aa8.02□□□□□ -1.13
PTPRR-207ENST00000548220 TSPYL4Q9UJ04 414 aa8.02□□□□□ -1.13
PTPRR-207ENST00000548220 A0A0G2JS52 829 aa8.01□□□□□ -1.13
PTPRR-207ENST00000548220 SOCS7O14512 581 aa8.01□□□□□ -1.13
PTPRR-207ENST00000548220 PLSCR1O15162 318 aa8.01□□□□□ -1.13
PTPRR-207ENST00000548220 SNRPA1P09661 255 aaKnown RBP8.01□□□□□ -1.13
PTPRR-207ENST00000548220 PRIM1P49642 420 aaKnown RBP8.01□□□□□ -1.13
PTPRR-207ENST00000548220 EIF4A1P60842 406 aaKnown RBP8.01□□□□□ -1.13
PTPRR-207ENST00000548220 MYT1Q01538 1121 aa8.01□□□□□ -1.13
PTPRR-207ENST00000548220 DCTN1Q14203 1278 aa8.01□□□□□ -1.13
PTPRR-207ENST00000548220 PIGBQ92521 554 aa8.01□□□□□ -1.13
PTPRR-207ENST00000548220 DDX27Q96GQ7 796 aaKnown RBP8.01□□□□□ -1.13
PTPRR-207ENST00000548220 GIGYF1O75420 1035 aaPredicted RBP8□□□□□ -1.13
PTPRR-207ENST00000548220 PRKCSHP14314 528 aaPredicted RBP8□□□□□ -1.13
PTPRR-207ENST00000548220 NBR1Q14596 966 aa8□□□□□ -1.13
PTPRR-207ENST00000548220 CDCA7LQ96GN5 454 aa8□□□□□ -1.13
PTPRR-207ENST00000548220 THUMPD2Q9BTF0 503 aaKnown RBP8□□□□□ -1.13
PTPRR-207ENST00000548220 SALL2Q9Y467 1007 aaPredicted RBP8□□□□□ -1.13
PTPRR-207ENST00000548220 BTAF1O14981 1849 aa8□□□□□ -1.13
PTPRR-207ENST00000548220 LY75O60449 1722 aa8□□□□□ -1.13
PTPRR-207ENST00000548220 RGS12O14924 1447 aa8□□□□□ -1.13
PTPRR-207ENST00000548220 VAMP4O75379 141 aa7.99□□□□□ -1.13
PTPRR-207ENST00000548220 STARD3NLO95772 234 aa7.99□□□□□ -1.13
PTPRR-207ENST00000548220 MAP3K9P80192 1104 aa7.99□□□□□ -1.13
PTPRR-207ENST00000548220 TWISTNBQ3B726 338 aaPredicted RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms