RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 MEGF6O75095 1541 aa15.48■□□□□ 0.07
SCAF11-209ENST00000547018 MCTP1Q6DN14 999 aa15.48■□□□□ 0.07
SCAF11-209ENST00000547018 DNAJC2Q99543 621 aaKnown RBP15.48■□□□□ 0.07
SCAF11-209ENST00000547018 BABAM1Q9NWV8 329 aa15.48■□□□□ 0.07
SCAF11-209ENST00000547018 PDIA6Q15084 440 aa15.48■□□□□ 0.07
SCAF11-209ENST00000547018 TCEANC2Q96MN5 208 aa15.48■□□□□ 0.07
SCAF11-209ENST00000547018 ADAMTSL3P82987 1691 aa15.48■□□□□ 0.07
SCAF11-209ENST00000547018 CHGBP05060 677 aa15.48■□□□□ 0.07
SCAF11-209ENST00000547018 EIF5BO60841 1220 aaKnown RBP15.47■□□□□ 0.07
SCAF11-209ENST00000547018 MCCP23508 829 aa15.47■□□□□ 0.07
SCAF11-209ENST00000547018 GPTP24298 496 aa15.47■□□□□ 0.07
SCAF11-209ENST00000547018 RGPD5Q99666 1765 aa15.47■□□□□ 0.07
SCAF11-209ENST00000547018 EAF2Q96CJ1 260 aaPredicted RBP15.46■□□□□ 0.07
SCAF11-209ENST00000547018 CHMP4AQ9BY43 222 aa15.46■□□□□ 0.07
SCAF11-209ENST00000547018 NEURL1BA8MQ27 555 aa15.46■□□□□ 0.06
SCAF11-209ENST00000547018 CNTROBQ8N137 903 aa15.46■□□□□ 0.06
SCAF11-209ENST00000547018 KAZALD1Q96I82 304 aa15.46■□□□□ 0.06
SCAF11-209ENST00000547018 ZNF594Q96JF6 807 aaPredicted RBP15.46■□□□□ 0.06
SCAF11-209ENST00000547018 LMBR1LQ6UX01 489 aa15.45■□□□□ 0.06
SCAF11-209ENST00000547018 HOXB7P09629 217 aa15.45■□□□□ 0.06
SCAF11-209ENST00000547018 GCKRQ14397 625 aa15.45■□□□□ 0.06
SCAF11-209ENST00000547018 SNX21Q969T3 373 aa15.45■□□□□ 0.06
SCAF11-209ENST00000547018 FSD1Q9BTV5 496 aa15.45■□□□□ 0.06
SCAF11-209ENST00000547018 ASAP1Q9ULH1 1129 aa15.45■□□□□ 0.06
SCAF11-209ENST00000547018 IL2RBP14784 551 aa15.44■□□□□ 0.06
SCAF11-209ENST00000547018 KDM6AO15550 1401 aaPredicted RBP15.44■□□□□ 0.06
SCAF11-209ENST00000547018 RAB11FIP3O75154 756 aa15.44■□□□□ 0.06
SCAF11-209ENST00000547018 FAM227BQ96M60 508 aa15.44■□□□□ 0.06
SCAF11-209ENST00000547018 VIRMAQ69YN4 1812 aaKnown RBP15.44■□□□□ 0.06
SCAF11-209ENST00000547018 SASH1O94885 1247 aa15.44■□□□□ 0.06
SCAF11-209ENST00000547018 SLFNL1Q499Z3 407 aa15.44■□□□□ 0.06
SCAF11-209ENST00000547018 PRPF40BQ6NWY9 871 aaKnown RBP15.44■□□□□ 0.06
SCAF11-209ENST00000547018 GBP4Q96PP9 640 aa15.44■□□□□ 0.06
SCAF11-209ENST00000547018 GOLGB1Q14789 3259 aaKnown RBP15.43■□□□□ 0.06
SCAF11-209ENST00000547018 HSP90AB4PQ58FF6 505 aa15.43■□□□□ 0.06
SCAF11-209ENST00000547018 ACSBG1Q96GR2 724 aa15.43■□□□□ 0.06
SCAF11-209ENST00000547018 MARF1Q9Y4F3 1742 aaKnown RBP15.43■□□□□ 0.06
SCAF11-209ENST00000547018 NBPF26B4DH59 902 aa15.43■□□□□ 0.06
SCAF11-209ENST00000547018 POLA2Q14181 598 aa15.43■□□□□ 0.06
SCAF11-209ENST00000547018 NBPF14Q5TI25 921 aa15.43■□□□□ 0.06
SCAF11-209ENST00000547018 NBPF10Q6P3W6 841 aaKnown RBP15.43■□□□□ 0.06
SCAF11-209ENST00000547018 NBPF15Q8N660 670 aa15.43■□□□□ 0.06
SCAF11-209ENST00000547018 PI4K2BQ8TCG2 481 aa15.43■□□□□ 0.06
SCAF11-209ENST00000547018 ECHDC1Q9NTX5 307 aa15.43■□□□□ 0.06
SCAF11-209ENST00000547018 TMOD3Q9NYL9 352 aa15.43■□□□□ 0.06
SCAF11-209ENST00000547018 DDX49Q9Y6V7 483 aaKnown RBP15.43■□□□□ 0.06
SCAF11-209ENST00000547018 PPFIA3O75145 1194 aa15.42■□□□□ 0.06
SCAF11-209ENST00000547018 ALDH1L1O75891 902 aa15.42■□□□□ 0.06
SCAF11-209ENST00000547018 SYNE4Q8N205 404 aa15.42■□□□□ 0.06
SCAF11-209ENST00000547018 TMX3Q96JJ7 454 aa15.42■□□□□ 0.06
SCAF11-209ENST00000547018 TFCP2Q12800 502 aa15.42■□□□□ 0.06
SCAF11-209ENST00000547018 TNS3Q68CZ2 1445 aa15.42■□□□□ 0.06
SCAF11-209ENST00000547018 GPATCH3Q96I76 525 aa15.42■□□□□ 0.06
SCAF11-209ENST00000547018 METTL22Q9BUU2 404 aaPredicted RBP15.42■□□□□ 0.06
SCAF11-209ENST00000547018 GDPD2Q9HCC8 539 aa15.42■□□□□ 0.06
SCAF11-209ENST00000547018 RASEFQ8IZ41 740 aa15.42■□□□□ 0.06
SCAF11-209ENST00000547018 PANK2Q9BZ23 570 aa15.42■□□□□ 0.06
SCAF11-209ENST00000547018 TIMM10P62072 90 aa15.41■□□□□ 0.06
SCAF11-209ENST00000547018 OSBPL3Q9H4L5 887 aa15.41■□□□□ 0.06
SCAF11-209ENST00000547018 GLRX3O76003 335 aaKnown RBP15.41■□□□□ 0.06
SCAF11-209ENST00000547018 PTH1RQ03431 593 aa15.41■□□□□ 0.06
SCAF11-209ENST00000547018 DDX46Q7L014 1031 aaKnown RBP15.41■□□□□ 0.06
SCAF11-209ENST00000547018 DNAJC10Q8IXB1 793 aa15.41■□□□□ 0.06
SCAF11-209ENST00000547018 NAP1L2Q9ULW6 460 aaPredicted RBP15.41■□□□□ 0.06
SCAF11-209ENST00000547018 PRPF40AO75400 957 aaKnown RBP15.41■□□□□ 0.06
SCAF11-209ENST00000547018 FAM89AQ96GI7 184 aa15.41■□□□□ 0.06
SCAF11-209ENST00000547018 SNRKQ9NRH2 765 aa15.41■□□□□ 0.06
SCAF11-209ENST00000547018 MED1Q15648 1581 aaPredicted RBP15.4■□□□□ 0.06
SCAF11-209ENST00000547018 WDR17Q8IZU2 1322 aa15.4■□□□□ 0.06
SCAF11-209ENST00000547018 GOLGA6L22H0YM25 854 aa15.4■□□□□ 0.06
SCAF11-209ENST00000547018 CASTP20810 708 aaKnown RBP15.4■□□□□ 0.06
SCAF11-209ENST00000547018 TAF7LQ5H9L4 462 aa15.39■□□□□ 0.05
SCAF11-209ENST00000547018 TBC1D2BQ9UPU7 963 aa15.39■□□□□ 0.05
SCAF11-209ENST00000547018 SALL3Q9BXA9 1300 aa15.39■□□□□ 0.05
SCAF11-209ENST00000547018 GOLGA6L3A6NEY3 463 aa15.39■□□□□ 0.05
SCAF11-209ENST00000547018 KCNQ4P56696 695 aa15.39■□□□□ 0.05
SCAF11-209ENST00000547018 CCDC129Q6ZRS4 1044 aa15.39■□□□□ 0.05
SCAF11-209ENST00000547018 JAKMIP1Q96N16 626 aaKnown RBP15.39■□□□□ 0.05
SCAF11-209ENST00000547018 DBNDD2Q9BQY9 259 aa15.39■□□□□ 0.05
SCAF11-209ENST00000547018 STAP2Q9UGK3 403 aa15.38■□□□□ 0.05
SCAF11-209ENST00000547018 STK3Q13188 491 aa15.38■□□□□ 0.05
SCAF11-209ENST00000547018 GORABQ5T7V8 394 aa15.38■□□□□ 0.05
SCAF11-209ENST00000547018 SEC62Q99442 399 aaKnown RBP15.38■□□□□ 0.05
SCAF11-209ENST00000547018 NMIQ13287 307 aaPredicted RBP15.37■□□□□ 0.05
SCAF11-209ENST00000547018 RAB3GAP1Q15042 981 aa15.37■□□□□ 0.05
SCAF11-209ENST00000547018 PCDH11XQ9BZA7 1347 aa15.37■□□□□ 0.05
SCAF11-209ENST00000547018 PCDH11YQ9BZA8 1340 aa15.37■□□□□ 0.05
SCAF11-209ENST00000547018 DDX11L8A8MPP1 907 aa15.37■□□□□ 0.05
SCAF11-209ENST00000547018 BAG4O95429 457 aaKnown RBP15.37■□□□□ 0.05
SCAF11-209ENST00000547018 FOSBP53539 338 aa15.37■□□□□ 0.05
SCAF11-209ENST00000547018 COL9A3Q14050 684 aaPredicted RBP15.37■□□□□ 0.05
SCAF11-209ENST00000547018 HSP90AB3PQ58FF7 597 aa15.37■□□□□ 0.05
SCAF11-209ENST00000547018 CAVIN1Q6NZI2 390 aaKnown RBP15.37■□□□□ 0.05
SCAF11-209ENST00000547018 SGSM2O43147 1006 aa15.36■□□□□ 0.05
SCAF11-209ENST00000547018 ADCK5Q3MIX3 580 aa15.36■□□□□ 0.05
SCAF11-209ENST00000547018 NECAB1Q8N987 351 aa15.36■□□□□ 0.05
SCAF11-209ENST00000547018 PUS3Q9BZE2 481 aaKnown RBP15.36■□□□□ 0.05
SCAF11-209ENST00000547018 HDAC5Q9UQL6 1122 aa15.36■□□□□ 0.05
SCAF11-209ENST00000547018 LRRC24Q50LG9 513 aa15.36■□□□□ 0.05
SCAF11-209ENST00000547018 RBM27Q9P2N5 1060 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms