RNA–Protein interactions for RNA: ENST00000546718.5

USP15-206, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-206ENST00000546718 TAOK3Q9H2K8 898 aa19.49■□□□□ 0.71
USP15-206ENST00000546718 CAPN15O75808 1086 aa19.48■□□□□ 0.71
USP15-206ENST00000546718 POTEIP0CG38 1075 aa19.48■□□□□ 0.71
USP15-206ENST00000546718 POTEJP0CG39 1038 aa19.48■□□□□ 0.71
USP15-206ENST00000546718 CNGB1Q14028 1251 aaPredicted RBP19.48■□□□□ 0.71
USP15-206ENST00000546718 SETDB2Q96T68 719 aa19.48■□□□□ 0.71
USP15-206ENST00000546718 PIP4K2AP48426 406 aaPredicted RBP19.47■□□□□ 0.71
USP15-206ENST00000546718 STYK1Q6J9G0 422 aa19.47■□□□□ 0.71
USP15-206ENST00000546718 DZIP3Q86Y13 1208 aaKnown RBP19.47■□□□□ 0.71
USP15-206ENST00000546718 PRAMEF22A3QJZ6 481 aa19.46■□□□□ 0.71
USP15-206ENST00000546718 BTBD11A6QL63 1104 aa19.46■□□□□ 0.71
USP15-206ENST00000546718 DDNO94850 711 aaPredicted RBP19.46■□□□□ 0.71
USP15-206ENST00000546718 CNKSR1Q969H4 720 aa19.46■□□□□ 0.71
USP15-206ENST00000546718 RSPH6AQ9H0K4 717 aa19.46■□□□□ 0.71
USP15-206ENST00000546718 PRKAR2BP31323 418 aa19.45■□□□□ 0.7
USP15-206ENST00000546718 ST5P78524 1137 aa19.45■□□□□ 0.7
USP15-206ENST00000546718 USP16Q9Y5T5 823 aa19.45■□□□□ 0.7
USP15-206ENST00000546718 NPHP1O15259 732 aa19.44■□□□□ 0.7
USP15-206ENST00000546718 CHADLQ6NUI6 762 aa19.44■□□□□ 0.7
USP15-206ENST00000546718 MASTLQ96GX5 879 aa19.44■□□□□ 0.7
USP15-206ENST00000546718 C7orf43Q8WVR3 580 aa19.43■□□□□ 0.7
USP15-206ENST00000546718 CREBZFQ9NS37 354 aa19.43■□□□□ 0.7
USP15-206ENST00000546718 SOGA3Q5TF21 947 aa19.42■□□□□ 0.7
USP15-206ENST00000546718 NPM2Q86SE8 214 aaKnown RBP19.42■□□□□ 0.7
USP15-206ENST00000546718 SCN4AP35499 1836 aa19.41■□□□□ 0.7
USP15-206ENST00000546718 CLEC4GQ6UXB4 293 aa19.41■□□□□ 0.7
USP15-206ENST00000546718 NBPF5PQ86XG9 351 aaPredicted RBP19.41■□□□□ 0.7
USP15-206ENST00000546718 L3MBTL3Q96JM7 780 aaPredicted RBP19.41■□□□□ 0.7
USP15-206ENST00000546718 MKRN1Q9UHC7 482 aaKnown RBP19.41■□□□□ 0.7
USP15-206ENST00000546718 ADAMTSL1Q8N6G6 1762 aa19.4■□□□□ 0.7
USP15-206ENST00000546718 OLFM4Q6UX06 510 aa19.4■□□□□ 0.7
USP15-206ENST00000546718 MCM10Q7L590 875 aa19.4■□□□□ 0.7
USP15-206ENST00000546718 PASKQ96RG2 1323 aa19.4■□□□□ 0.7
USP15-206ENST00000546718 LAMB4A4D0S4 1761 aa19.39■□□□□ 0.7
USP15-206ENST00000546718 KLRG2A4D1S0 409 aaPredicted RBP19.39■□□□□ 0.69
USP15-206ENST00000546718 NBPF26B4DH59 902 aa19.39■□□□□ 0.69
USP15-206ENST00000546718 CCDC93Q567U6 631 aa19.39■□□□□ 0.69
USP15-206ENST00000546718 NBPF10Q6P3W6 841 aaKnown RBP19.39■□□□□ 0.69
USP15-206ENST00000546718 NBPF15Q8N660 670 aa19.39■□□□□ 0.69
USP15-206ENST00000546718 ZNF541Q9H0D2 1346 aa19.39■□□□□ 0.69
USP15-206ENST00000546718 SNRPA1P09661 255 aaKnown RBP19.38■□□□□ 0.69
USP15-206ENST00000546718 NPR1P16066 1061 aa19.38■□□□□ 0.69
USP15-206ENST00000546718 CNTNAP1P78357 1384 aa19.38■□□□□ 0.69
USP15-206ENST00000546718 TAF1DQ9H5J8 278 aaPredicted RBP19.38■□□□□ 0.69
USP15-206ENST00000546718 ZNF652Q9Y2D9 606 aa19.38■□□□□ 0.69
USP15-206ENST00000546718 SNED1Q8TER0 1413 aa19.37■□□□□ 0.69
USP15-206ENST00000546718 IQCA1LA6NCM1 817 aa19.37■□□□□ 0.69
USP15-206ENST00000546718 LDHDQ86WU2 507 aa19.37■□□□□ 0.69
USP15-206ENST00000546718 ZNF277Q9NRM2 450 aaPredicted RBP19.37■□□□□ 0.69
USP15-206ENST00000546718 FKBP4Q02790 459 aaKnown RBP eCLIP19.36■□□□□ 0.69
USP15-206ENST00000546718 DCTN1Q14203 1278 aa19.36■□□□□ 0.69
USP15-206ENST00000546718 CFAP53Q96M91 514 aa19.36■□□□□ 0.69
USP15-206ENST00000546718 NIP7Q9Y221 180 aaKnown RBP eCLIP19.36■□□□□ 0.69
USP15-206ENST00000546718 RGL2O15211 777 aa19.35■□□□□ 0.69
USP15-206ENST00000546718 U2AF1L5P0DN76 240 aaPredicted RBP19.34■□□□□ 0.69
USP15-206ENST00000546718 U2AF1Q01081 240 aaKnown RBP eCLIP19.34■□□□□ 0.69
USP15-206ENST00000546718 HLFQ16534 295 aa19.34■□□□□ 0.69
USP15-206ENST00000546718 TPTE2Q6XPS3 522 aa19.34■□□□□ 0.69
USP15-206ENST00000546718 RTF1Q92541 710 aaKnown RBP19.34■□□□□ 0.69
USP15-206ENST00000546718 COL4A5P29400 1685 aa19.33■□□□□ 0.69
USP15-206ENST00000546718 ABCC12Q96J65 1359 aa19.33■□□□□ 0.69
USP15-206ENST00000546718 FAM177BA6PVY3 158 aa19.33■□□□□ 0.68
USP15-206ENST00000546718 FOXN1O15353 648 aa19.33■□□□□ 0.68
USP15-206ENST00000546718 ITGBL1O95965 494 aaPredicted RBP19.33■□□□□ 0.68
USP15-206ENST00000546718 KDM3BQ7LBC6 1761 aa19.33■□□□□ 0.68
USP15-206ENST00000546718 PPP2R1AP30153 589 aa19.32■□□□□ 0.68
USP15-206ENST00000546718 NUDCQ9Y266 331 aa19.32■□□□□ 0.68
USP15-206ENST00000546718 RNF123Q5XPI4 1314 aa19.31■□□□□ 0.68
USP15-206ENST00000546718 EAPPQ56P03 285 aaPredicted RBP19.31■□□□□ 0.68
USP15-206ENST00000546718 RTKN2Q8IZC4 609 aa19.31■□□□□ 0.68
USP15-206ENST00000546718 HACL1Q9UJ83 578 aa19.31■□□□□ 0.68
USP15-206ENST00000546718 FZD9O00144 591 aa19.3■□□□□ 0.68
USP15-206ENST00000546718 IARSP41252 1262 aaKnown RBP19.3■□□□□ 0.68
USP15-206ENST00000546718 VEGFBP49765 207 aa19.3■□□□□ 0.68
USP15-206ENST00000546718 CRY2Q49AN0 593 aa19.3■□□□□ 0.68
USP15-206ENST00000546718 MIS18AQ9NYP9 233 aa19.3■□□□□ 0.68
USP15-206ENST00000546718 LTBP1Q14766 1721 aa19.3■□□□□ 0.68
USP15-206ENST00000546718 NUP98P52948 1817 aa19.3■□□□□ 0.68
USP15-206ENST00000546718 DLG5Q8TDM6 1919 aa19.29■□□□□ 0.68
USP15-206ENST00000546718 TMEM88BA6NKF7 163 aa19.29■□□□□ 0.68
USP15-206ENST00000546718 HTATSF1O43719 755 aaKnown RBP19.29■□□□□ 0.68
USP15-206ENST00000546718 EPHX2P34913 555 aa19.29■□□□□ 0.68
USP15-206ENST00000546718 SLC51AQ86UW1 340 aa19.28■□□□□ 0.68
USP15-206ENST00000546718 SYNE4Q8N205 404 aa19.28■□□□□ 0.68
USP15-206ENST00000546718 RIC1Q4ADV7 1423 aa19.27■□□□□ 0.68
USP15-206ENST00000546718 ALDH1B1P30837 517 aa19.27■□□□□ 0.68
USP15-206ENST00000546718 TAF7Q15545 349 aaPredicted RBP19.27■□□□□ 0.68
USP15-206ENST00000546718 NUTM1Q86Y26 1132 aa19.27■□□□□ 0.68
USP15-206ENST00000546718 GPC2Q8N158 579 aa19.27■□□□□ 0.68
USP15-206ENST00000546718 PSMD1Q99460 953 aa19.27■□□□□ 0.68
USP15-206ENST00000546718 UBN2Q6ZU65 1347 aa19.26■□□□□ 0.67
USP15-206ENST00000546718 MAP1SQ66K74 1059 aaPredicted RBP19.26■□□□□ 0.67
USP15-206ENST00000546718 PRDM10Q9NQV6 1147 aa19.26■□□□□ 0.67
USP15-206ENST00000546718 IBTKQ9P2D0 1353 aaPredicted RBP19.25■□□□□ 0.67
USP15-206ENST00000546718 GTF2E1P29083 439 aaPredicted RBP19.25■□□□□ 0.67
USP15-206ENST00000546718 PNMA8AQ86V59 439 aaPredicted RBP19.25■□□□□ 0.67
USP15-206ENST00000546718 CLEC11AQ9Y240 323 aa19.25■□□□□ 0.67
USP15-206ENST00000546718 MAP3K15Q6ZN16 1313 aa19.25■□□□□ 0.67
USP15-206ENST00000546718 RASSF10A6NK89 507 aa19.24■□□□□ 0.67
USP15-206ENST00000546718 ERVV-1B6SEH8 477 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms