RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 SMC1BQ8NDV3 1235 aa16.85■□□□□ 0.29
COPS7A-221ENST00000546229 KLRG2A4D1S0 409 aaPredicted RBP16.84■□□□□ 0.29
COPS7A-221ENST00000546229 RGL2O15211 777 aa16.84■□□□□ 0.29
COPS7A-221ENST00000546229 C21orf2O43822 256 aa16.84■□□□□ 0.29
COPS7A-221ENST00000546229 C16orf71Q8IYS4 520 aaPredicted RBP16.84■□□□□ 0.29
COPS7A-221ENST00000546229 CNBD1Q8NA66 436 aa16.84■□□□□ 0.29
COPS7A-221ENST00000546229 C7orf43Q8WVR3 580 aa16.84■□□□□ 0.29
COPS7A-221ENST00000546229 ADAMTSL1Q8N6G6 1762 aa16.84■□□□□ 0.29
COPS7A-221ENST00000546229 DCTN1Q14203 1278 aa16.83■□□□□ 0.28
COPS7A-221ENST00000546229 STYK1Q6J9G0 422 aa16.83■□□□□ 0.28
COPS7A-221ENST00000546229 PRPF40BQ6NWY9 871 aaKnown RBP16.83■□□□□ 0.28
COPS7A-221ENST00000546229 CFAP53Q96M91 514 aa16.83■□□□□ 0.28
COPS7A-221ENST00000546229 ZNF330Q9Y3S2 320 aaPredicted RBP16.83■□□□□ 0.28
COPS7A-221ENST00000546229 VEGFAP15692 232 aaPredicted RBP16.82■□□□□ 0.28
COPS7A-221ENST00000546229 CLEC4GQ6UXB4 293 aa16.82■□□□□ 0.28
COPS7A-221ENST00000546229 SETDB2Q96T68 719 aa16.82■□□□□ 0.28
COPS7A-221ENST00000546229 HTATSF1O43719 755 aaKnown RBP16.81■□□□□ 0.28
COPS7A-221ENST00000546229 SNRPA1P09661 255 aaKnown RBP16.81■□□□□ 0.28
COPS7A-221ENST00000546229 U2AF1L5P0DN76 240 aaPredicted RBP16.81■□□□□ 0.28
COPS7A-221ENST00000546229 U2AF1Q01081 240 aaKnown RBP eCLIP16.81■□□□□ 0.28
COPS7A-221ENST00000546229 ZNF622Q969S3 477 aaKnown RBP eCLIP16.81■□□□□ 0.28
COPS7A-221ENST00000546229 NUP98P52948 1817 aa16.81■□□□□ 0.28
COPS7A-221ENST00000546229 SCN4AP35499 1836 aa16.8■□□□□ 0.28
COPS7A-221ENST00000546229 RIC1Q4ADV7 1423 aa16.79■□□□□ 0.28
COPS7A-221ENST00000546229 ABCC12Q96J65 1359 aa16.79■□□□□ 0.28
COPS7A-221ENST00000546229 COL4A5P29400 1685 aa16.79■□□□□ 0.28
COPS7A-221ENST00000546229 CNKSR1Q969H4 720 aa16.79■□□□□ 0.28
COPS7A-221ENST00000546229 MASTLQ96GX5 879 aa16.79■□□□□ 0.28
COPS7A-221ENST00000546229 PLEKHF1Q96S99 279 aa16.79■□□□□ 0.28
COPS7A-221ENST00000546229 TAOK3Q9H2K8 898 aa16.79■□□□□ 0.28
COPS7A-221ENST00000546229 ZNF219Q9P2Y4 722 aaPredicted RBP16.79■□□□□ 0.28
COPS7A-221ENST00000546229 NUDCQ9Y266 331 aa16.79■□□□□ 0.28
COPS7A-221ENST00000546229 POTEIP0CG38 1075 aa16.78■□□□□ 0.28
COPS7A-221ENST00000546229 POTEJP0CG39 1038 aa16.78■□□□□ 0.28
COPS7A-221ENST00000546229 ST5P78524 1137 aa16.78■□□□□ 0.28
COPS7A-221ENST00000546229 ERFEQ4G0M1 354 aa16.78■□□□□ 0.28
COPS7A-221ENST00000546229 HLFQ16534 295 aa16.77■□□□□ 0.28
COPS7A-221ENST00000546229 OLFM4Q6UX06 510 aa16.76■□□□□ 0.27
COPS7A-221ENST00000546229 NBPF5PQ86XG9 351 aaPredicted RBP16.76■□□□□ 0.27
COPS7A-221ENST00000546229 RTF1Q92541 710 aaKnown RBP16.76■□□□□ 0.27
COPS7A-221ENST00000546229 L3MBTL3Q96JM7 780 aaPredicted RBP16.76■□□□□ 0.27
COPS7A-221ENST00000546229 IBTKQ9P2D0 1353 aaPredicted RBP16.76■□□□□ 0.27
COPS7A-221ENST00000546229 NPR1P16066 1061 aa16.75■□□□□ 0.27
COPS7A-221ENST00000546229 TAF7Q15545 349 aaPredicted RBP16.75■□□□□ 0.27
COPS7A-221ENST00000546229 CRY2Q49AN0 593 aa16.75■□□□□ 0.27
COPS7A-221ENST00000546229 COL13A1Q5TAT6 717 aaPredicted RBP16.75■□□□□ 0.27
COPS7A-221ENST00000546229 MIS18AQ9NYP9 233 aa16.75■□□□□ 0.27
COPS7A-221ENST00000546229 ZNF652Q9Y2D9 606 aa16.75■□□□□ 0.27
COPS7A-221ENST00000546229 LTBP1Q14766 1721 aa16.75■□□□□ 0.27
COPS7A-221ENST00000546229 DDNO94850 711 aaPredicted RBP16.74■□□□□ 0.27
COPS7A-221ENST00000546229 SOGA3Q5TF21 947 aa16.74■□□□□ 0.27
COPS7A-221ENST00000546229 LRP10Q7Z4F1 713 aa16.74■□□□□ 0.27
COPS7A-221ENST00000546229 NIP7Q9Y221 180 aaKnown RBP eCLIP16.74■□□□□ 0.27
COPS7A-221ENST00000546229 UBN2Q6ZU65 1347 aa16.73■□□□□ 0.27
COPS7A-221ENST00000546229 ZNF541Q9H0D2 1346 aa16.73■□□□□ 0.27
COPS7A-221ENST00000546229 EIF4A1P60842 406 aaKnown RBP16.73■□□□□ 0.27
COPS7A-221ENST00000546229 CCDC93Q567U6 631 aa16.73■□□□□ 0.27
COPS7A-221ENST00000546229 SLC51AQ86UW1 340 aa16.73■□□□□ 0.27
COPS7A-221ENST00000546229 PASKQ96RG2 1323 aa16.72■□□□□ 0.27
COPS7A-221ENST00000546229 FKBP4Q02790 459 aaKnown RBP eCLIP16.72■□□□□ 0.27
COPS7A-221ENST00000546229 DPY19L2Q6NUT2 758 aa16.72■□□□□ 0.27
COPS7A-221ENST00000546229 THUMPD2Q9BTF0 503 aaKnown RBP16.72■□□□□ 0.27
COPS7A-221ENST00000546229 ANKRD36CQ5JPF3 1778 aa16.72■□□□□ 0.27
COPS7A-221ENST00000546229 NFE2L2Q16236 605 aa16.71■□□□□ 0.27
COPS7A-221ENST00000546229 TTLL7Q6ZT98 887 aa16.71■□□□□ 0.27
COPS7A-221ENST00000546229 LAMB2P55268 1798 aa16.71■□□□□ 0.27
COPS7A-221ENST00000546229 MAP3K15Q6ZN16 1313 aa16.7■□□□□ 0.26
COPS7A-221ENST00000546229 ERVV-1B6SEH8 477 aa16.7■□□□□ 0.26
COPS7A-221ENST00000546229 CHADLQ6NUI6 762 aa16.7■□□□□ 0.26
COPS7A-221ENST00000546229 TPTE2Q6XPS3 522 aa16.7■□□□□ 0.26
COPS7A-221ENST00000546229 NPM2Q86SE8 214 aaKnown RBP16.7■□□□□ 0.26
COPS7A-221ENST00000546229 TAF1DQ9H5J8 278 aaPredicted RBP16.69■□□□□ 0.26
COPS7A-221ENST00000546229 ZNF277Q9NRM2 450 aaPredicted RBP16.69■□□□□ 0.26
COPS7A-221ENST00000546229 THSD7BQ9C0I4 1608 aa16.68■□□□□ 0.26
COPS7A-221ENST00000546229 FZD9O00144 591 aa16.68■□□□□ 0.26
COPS7A-221ENST00000546229 NPHP1O15259 732 aa16.68■□□□□ 0.26
COPS7A-221ENST00000546229 HSPA1AP0DMV8 641 aaKnown RBP16.68■□□□□ 0.26
COPS7A-221ENST00000546229 HSPA1BP0DMV9 641 aaKnown RBP16.68■□□□□ 0.26
COPS7A-221ENST00000546229 PNISRQ8TF01 805 aaKnown RBP16.68■□□□□ 0.26
COPS7A-221ENST00000546229 CREBZFQ9NS37 354 aa16.68■□□□□ 0.26
COPS7A-221ENST00000546229 FAM177BA6PVY3 158 aa16.67■□□□□ 0.26
COPS7A-221ENST00000546229 NTSR2O95665 410 aa16.67■□□□□ 0.26
COPS7A-221ENST00000546229 HOXA10P31260 410 aaPredicted RBP16.67■□□□□ 0.26
COPS7A-221ENST00000546229 PDIA6Q15084 440 aa16.67■□□□□ 0.26
COPS7A-221ENST00000546229 C3orf67Q6ZVT6 689 aa16.67■□□□□ 0.26
COPS7A-221ENST00000546229 NUTM1Q86Y26 1132 aa16.67■□□□□ 0.26
COPS7A-221ENST00000546229 ZNF34Q8IZ26 560 aa16.67■□□□□ 0.26
COPS7A-221ENST00000546229 PSMD1Q99460 953 aa16.67■□□□□ 0.26
COPS7A-221ENST00000546229 ERBB4Q15303 1308 aa16.67■□□□□ 0.26
COPS7A-221ENST00000546229 CNTNAP1P78357 1384 aa16.66■□□□□ 0.26
COPS7A-221ENST00000546229 ITGBL1O95965 494 aaPredicted RBP16.66■□□□□ 0.26
COPS7A-221ENST00000546229 LDHDQ86WU2 507 aa16.66■□□□□ 0.26
COPS7A-221ENST00000546229 IQCA1LA6NCM1 817 aa16.65■□□□□ 0.26
COPS7A-221ENST00000546229 IARSP41252 1262 aaKnown RBP16.65■□□□□ 0.26
COPS7A-221ENST00000546229 RTKN2Q8IZC4 609 aa16.65■□□□□ 0.26
COPS7A-221ENST00000546229 LRRC37AA6NMS7 1700 aa16.65■□□□□ 0.26
COPS7A-221ENST00000546229 SUSD4Q5VX71 490 aa16.64■□□□□ 0.25
COPS7A-221ENST00000546229 NYXQ9GZU5 481 aa16.64■□□□□ 0.25
COPS7A-221ENST00000546229 DUOX1Q9NRD9 1551 aa16.64■□□□□ 0.25
COPS7A-221ENST00000546229 GPTP24298 496 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms