RNA–Protein interactions for RNA: ENST00000546039.5

PAAF1-216, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-216ENST00000546039 TTLL7Q6ZT98 887 aa13.74□□□□□ -0.21
PAAF1-216ENST00000546039 COPS6Q7L5N1 327 aa13.74□□□□□ -0.21
PAAF1-216ENST00000546039 ARHGEF1Q92888 912 aaKnown RBP13.74□□□□□ -0.21
PAAF1-216ENST00000546039 NARFQ9UHQ1 456 aa13.74□□□□□ -0.21
PAAF1-216ENST00000546039 MYH3P11055 1940 aa13.73□□□□□ -0.21
PAAF1-216ENST00000546039 ERVV-1B6SEH8 477 aa13.73□□□□□ -0.21
PAAF1-216ENST00000546039 ZPR1O75312 459 aa13.73□□□□□ -0.21
PAAF1-216ENST00000546039 BCAR3O75815 825 aa13.73□□□□□ -0.21
PAAF1-216ENST00000546039 CENPBP07199 599 aaPredicted RBP13.73□□□□□ -0.21
PAAF1-216ENST00000546039 FKBP5Q13451 457 aaPredicted RBP13.73□□□□□ -0.21
PAAF1-216ENST00000546039 G2E3Q7L622 706 aa13.73□□□□□ -0.21
PAAF1-216ENST00000546039 COL23A1Q86Y22 540 aaPredicted RBP13.73□□□□□ -0.21
PAAF1-216ENST00000546039 PLBD2Q8NHP8 589 aa13.73□□□□□ -0.21
PAAF1-216ENST00000546039 LAMB2P55268 1798 aa13.73□□□□□ -0.21
PAAF1-216ENST00000546039 ADCY9O60503 1353 aa13.72□□□□□ -0.21
PAAF1-216ENST00000546039 IPO8O15397 1037 aaKnown RBP13.72□□□□□ -0.21
PAAF1-216ENST00000546039 CAMTA2O94983 1202 aa13.72□□□□□ -0.21
PAAF1-216ENST00000546039 SMIM5Q71RC9 77 aa13.72□□□□□ -0.21
PAAF1-216ENST00000546039 ARXQ96QS3 562 aa13.72□□□□□ -0.21
PAAF1-216ENST00000546039 TBC1D2BQ9UPU7 963 aa13.72□□□□□ -0.21
PAAF1-216ENST00000546039 ZNF652Q9Y2D9 606 aa13.72□□□□□ -0.21
PAAF1-216ENST00000546039 ATP10DQ9P241 1426 aa13.72□□□□□ -0.21
PAAF1-216ENST00000546039 NRXN2Q9P2S2 1712 aa13.71□□□□□ -0.21
PAAF1-216ENST00000546039 MSH5O43196 834 aa13.71□□□□□ -0.21
PAAF1-216ENST00000546039 R3HDM1Q15032 1099 aaKnown RBP13.71□□□□□ -0.21
PAAF1-216ENST00000546039 ANKRD13DQ6ZTN6 518 aa13.71□□□□□ -0.21
PAAF1-216ENST00000546039 SLC16A10Q8TF71 515 aa13.71□□□□□ -0.21
PAAF1-216ENST00000546039 ARHGAP45Q92619 1136 aa13.71□□□□□ -0.21
PAAF1-216ENST00000546039 API5Q9BZZ5 524 aaKnown RBP13.71□□□□□ -0.21
PAAF1-216ENST00000546039 ZBTB3Q9H5J0 574 aa13.71□□□□□ -0.21
PAAF1-216ENST00000546039 SRP68Q9UHB9 627 aaKnown RBP13.71□□□□□ -0.21
PAAF1-216ENST00000546039 HSP90AB3PQ58FF7 597 aa13.7□□□□□ -0.22
PAAF1-216ENST00000546039 USPL1Q5W0Q7 1092 aa13.7□□□□□ -0.22
PAAF1-216ENST00000546039 CLEC4GQ6UXB4 293 aa13.7□□□□□ -0.22
PAAF1-216ENST00000546039 KSR2Q6VAB6 950 aa13.7□□□□□ -0.22
PAAF1-216ENST00000546039 GIGYF2Q6Y7W6 1299 aaKnown RBP13.7□□□□□ -0.22
PAAF1-216ENST00000546039 RIC3Q7Z5B4 369 aa13.7□□□□□ -0.22
PAAF1-216ENST00000546039 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.7□□□□□ -0.22
PAAF1-216ENST00000546039 NOB1Q9ULX3 412 aaKnown RBP13.7□□□□□ -0.22
PAAF1-216ENST00000546039 PI4KAP2A4QPH2 592 aa13.69□□□□□ -0.22
PAAF1-216ENST00000546039 GYS1P13807 737 aa13.69□□□□□ -0.22
PAAF1-216ENST00000546039 ZKSCAN2Q63HK3 967 aa13.69□□□□□ -0.22
PAAF1-216ENST00000546039 PI4KAP1Q8N8J0 262 aa13.69□□□□□ -0.22
PAAF1-216ENST00000546039 DNAAF4Q8WXU2 420 aa13.69□□□□□ -0.22
PAAF1-216ENST00000546039 FRAT1Q92837 279 aaPredicted RBP13.69□□□□□ -0.22
PAAF1-216ENST00000546039 MAP3K2Q9Y2U5 619 aa13.69□□□□□ -0.22
PAAF1-216ENST00000546039 NEXNQ0ZGT2 675 aa13.68□□□□□ -0.22
PAAF1-216ENST00000546039 ATF7IPQ6VMQ6 1270 aa13.68□□□□□ -0.22
PAAF1-216ENST00000546039 METTL22Q9BUU2 404 aaPredicted RBP13.68□□□□□ -0.22
PAAF1-216ENST00000546039 BCL2L12Q9HB09 334 aa13.68□□□□□ -0.22
PAAF1-216ENST00000546039 DDX60Q8IY21 1712 aaKnown RBP13.67□□□□□ -0.22
PAAF1-216ENST00000546039 KIF13BQ9NQT8 1826 aa13.67□□□□□ -0.22
PAAF1-216ENST00000546039 PSDA5PKW4 1024 aaPredicted RBP13.67□□□□□ -0.22
PAAF1-216ENST00000546039 F6X3S4 739 aa13.67□□□□□ -0.22
PAAF1-216ENST00000546039 MS4A1P11836 297 aa13.67□□□□□ -0.22
PAAF1-216ENST00000546039 TRIM27P14373 513 aa13.67□□□□□ -0.22
PAAF1-216ENST00000546039 HLFQ16534 295 aa13.67□□□□□ -0.22
PAAF1-216ENST00000546039 NLGN1Q8N2Q7 840 aa13.67□□□□□ -0.22
PAAF1-216ENST00000546039 ABCC4O15439 1325 aa13.66□□□□□ -0.22
PAAF1-216ENST00000546039 ANKRD31Q8N7Z5 1873 aa13.66□□□□□ -0.22
PAAF1-216ENST00000546039 RRP1P56182 461 aaKnown RBP13.66□□□□□ -0.22
PAAF1-216ENST00000546039 TCIRG1Q13488 830 aa13.66□□□□□ -0.22
PAAF1-216ENST00000546039 FKBP8Q14318 412 aa13.66□□□□□ -0.22
PAAF1-216ENST00000546039 CARMIL3Q8ND23 1372 aa13.66□□□□□ -0.22
PAAF1-216ENST00000546039 IBTKQ9P2D0 1353 aaPredicted RBP13.66□□□□□ -0.22
PAAF1-216ENST00000546039 PARP10Q53GL7 1025 aa13.65□□□□□ -0.22
PAAF1-216ENST00000546039 FTSJ3Q8IY81 847 aaKnown RBP13.65□□□□□ -0.22
PAAF1-216ENST00000546039 ZNF34Q8IZ26 560 aa13.65□□□□□ -0.22
PAAF1-216ENST00000546039 MYD88Q99836 296 aa13.65□□□□□ -0.22
PAAF1-216ENST00000546039 ISCA1Q9BUE6 129 aa13.65□□□□□ -0.22
PAAF1-216ENST00000546039 PDGFDQ9GZP0 370 aaPredicted RBP13.65□□□□□ -0.22
PAAF1-216ENST00000546039 MTFR1LQ9H019 292 aa13.65□□□□□ -0.22
PAAF1-216ENST00000546039 RNF123Q5XPI4 1314 aa13.64□□□□□ -0.23
PAAF1-216ENST00000546039 CCT4P50991 539 aaKnown RBP13.64□□□□□ -0.23
PAAF1-216ENST00000546039 TRIM28Q13263 835 aaKnown RBP13.64□□□□□ -0.23
PAAF1-216ENST00000546039 TBC1D9BQ66K14 1250 aa13.64□□□□□ -0.23
PAAF1-216ENST00000546039 MSL1Q68DK7 614 aa13.64□□□□□ -0.23
PAAF1-216ENST00000546039 SLC4A10Q6U841 1118 aa13.64□□□□□ -0.23
PAAF1-216ENST00000546039 DZIP1LQ8IYY4 767 aaKnown RBP13.64□□□□□ -0.23
PAAF1-216ENST00000546039 LINS1Q8NG48 757 aa13.64□□□□□ -0.23
PAAF1-216ENST00000546039 SETDB2Q96T68 719 aa13.64□□□□□ -0.23
PAAF1-216ENST00000546039 NIP7Q9Y221 180 aaKnown RBP eCLIP13.64□□□□□ -0.23
PAAF1-216ENST00000546039 UBN2Q6ZU65 1347 aa13.64□□□□□ -0.23
PAAF1-216ENST00000546039 DLEC1Q9Y238 1755 aa13.63□□□□□ -0.23
PAAF1-216ENST00000546039 ALDH1L1O75891 902 aa13.63□□□□□ -0.23
PAAF1-216ENST00000546039 IGKV5-2P06315 115 aa13.63□□□□□ -0.23
PAAF1-216ENST00000546039 GPTP24298 496 aa13.63□□□□□ -0.23
PAAF1-216ENST00000546039 TM4SF1P30408 202 aa13.63□□□□□ -0.23
PAAF1-216ENST00000546039 NFIXQ14938 502 aa13.63□□□□□ -0.23
PAAF1-216ENST00000546039 BEND3Q5T5X7 828 aa13.63□□□□□ -0.23
PAAF1-216ENST00000546039 CCDC191Q8NCU4 936 aa13.63□□□□□ -0.23
PAAF1-216ENST00000546039 SRCIN1Q9C0H9 1055 aa13.63□□□□□ -0.23
PAAF1-216ENST00000546039 LRP5O75197 1615 aa13.63□□□□□ -0.23
PAAF1-216ENST00000546039 NEURL1BA8MQ27 555 aa13.62□□□□□ -0.23
PAAF1-216ENST00000546039 ATP5J2-PTCD1G3V325 749 aa13.62□□□□□ -0.23
PAAF1-216ENST00000546039 PLIN1O60240 522 aa13.62□□□□□ -0.23
PAAF1-216ENST00000546039 ZBTB7AO95365 584 aa13.62□□□□□ -0.23
PAAF1-216ENST00000546039 PDE3AQ14432 1141 aa13.62□□□□□ -0.23
PAAF1-216ENST00000546039 BICDL1Q6ZP65 573 aa13.62□□□□□ -0.23
PAAF1-216ENST00000546039 PPP1R42Q7Z4L9 355 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms