RNA–Protein interactions for RNA: ENST00000546006.5

CCDC189-212, Transcript of coiled-coil domain containing 189, humanhuman

TSL 2

Gene CCDC189, Length 1,533 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189-212ENST00000546006 CAMTA2O94983 1202 aa23.69■■□□□ 1.38
CCDC189-212ENST00000546006 MAP3K15Q6ZN16 1313 aa23.68■■□□□ 1.38
CCDC189-212ENST00000546006 DDX58O95786 925 aaKnown RBP23.68■■□□□ 1.38
CCDC189-212ENST00000546006 USPL1Q5W0Q7 1092 aa23.68■■□□□ 1.38
CCDC189-212ENST00000546006 PDGFDQ9GZP0 370 aaPredicted RBP23.68■■□□□ 1.38
CCDC189-212ENST00000546006 ERVV-1B6SEH8 477 aa23.67■■□□□ 1.38
CCDC189-212ENST00000546006 ANKRD13DQ6ZTN6 518 aa23.67■■□□□ 1.38
CCDC189-212ENST00000546006 ZBTB3Q9H5J0 574 aa23.67■■□□□ 1.38
CCDC189-212ENST00000546006 FKBP5Q13451 457 aaPredicted RBP23.66■■□□□ 1.38
CCDC189-212ENST00000546006 PLBD2Q8NHP8 589 aa23.66■■□□□ 1.38
CCDC189-212ENST00000546006 PTPRCP08575 1304 aa23.65■■□□□ 1.38
CCDC189-212ENST00000546006 KIF16BQ96L93 1317 aa23.65■■□□□ 1.38
CCDC189-212ENST00000546006 RGL2O15211 777 aa23.65■■□□□ 1.38
CCDC189-212ENST00000546006 GYS1P13807 737 aa23.65■■□□□ 1.38
CCDC189-212ENST00000546006 NOB1Q9ULX3 412 aaKnown RBP23.65■■□□□ 1.38
CCDC189-212ENST00000546006 BCORQ6W2J9 1755 aa23.65■■□□□ 1.38
CCDC189-212ENST00000546006 SCN7AQ01118 1682 aa23.65■■□□□ 1.38
CCDC189-212ENST00000546006 KSR2Q6VAB6 950 aa23.64■■□□□ 1.38
CCDC189-212ENST00000546006 RIC3Q7Z5B4 369 aa23.64■■□□□ 1.38
CCDC189-212ENST00000546006 SLC16A10Q8TF71 515 aa23.64■■□□□ 1.38
CCDC189-212ENST00000546006 BCL2L12Q9HB09 334 aa23.64■■□□□ 1.38
CCDC189-212ENST00000546006 CASZ1Q86V15 1759 aa23.64■■□□□ 1.38
CCDC189-212ENST00000546006 PI4KAP2A4QPH2 592 aa23.64■■□□□ 1.37
CCDC189-212ENST00000546006 HLFQ16534 295 aa23.64■■□□□ 1.37
CCDC189-212ENST00000546006 CLEC4GQ6UXB4 293 aa23.64■■□□□ 1.37
CCDC189-212ENST00000546006 PI4KAP1Q8N8J0 262 aa23.64■■□□□ 1.37
CCDC189-212ENST00000546006 ZNF652Q9Y2D9 606 aa23.64■■□□□ 1.37
CCDC189-212ENST00000546006 ADCY9O60503 1353 aa23.63■■□□□ 1.37
CCDC189-212ENST00000546006 GIGYF2Q6Y7W6 1299 aaKnown RBP23.63■■□□□ 1.37
CCDC189-212ENST00000546006 FKBP8Q14318 412 aa23.61■■□□□ 1.37
CCDC189-212ENST00000546006 ARHGAP45Q92619 1136 aa23.61■■□□□ 1.37
CCDC189-212ENST00000546006 FRAT1Q92837 279 aaPredicted RBP23.61■■□□□ 1.37
CCDC189-212ENST00000546006 MAP3K2Q9Y2U5 619 aa23.61■■□□□ 1.37
CCDC189-212ENST00000546006 IPO8O15397 1037 aaKnown RBP23.6■■□□□ 1.37
CCDC189-212ENST00000546006 NLGN1Q8N2Q7 840 aa23.6■■□□□ 1.37
CCDC189-212ENST00000546006 HSP90AB3PQ58FF7 597 aa23.59■■□□□ 1.37
CCDC189-212ENST00000546006 DNAAF4Q8WXU2 420 aa23.59■■□□□ 1.37
CCDC189-212ENST00000546006 API5Q9BZZ5 524 aaKnown RBP23.59■■□□□ 1.37
CCDC189-212ENST00000546006 ARFGEF2Q9Y6D5 1785 aa23.59■■□□□ 1.37
CCDC189-212ENST00000546006 MSL1Q68DK7 614 aa23.59■■□□□ 1.37
CCDC189-212ENST00000546006 METTL22Q9BUU2 404 aaPredicted RBP23.59■■□□□ 1.37
CCDC189-212ENST00000546006 NUP98P52948 1817 aa23.58■■□□□ 1.37
CCDC189-212ENST00000546006 ATP10DQ9P241 1426 aa23.58■■□□□ 1.37
CCDC189-212ENST00000546006 F6X3S4 739 aa23.58■■□□□ 1.36
CCDC189-212ENST00000546006 ZBTB7AO95365 584 aa23.58■■□□□ 1.36
CCDC189-212ENST00000546006 TCIRG1Q13488 830 aa23.58■■□□□ 1.36
CCDC189-212ENST00000546006 ZKSCAN2Q63HK3 967 aa23.58■■□□□ 1.36
CCDC189-212ENST00000546006 TBC1D9BQ66K14 1250 aa23.58■■□□□ 1.36
CCDC189-212ENST00000546006 MTFR1LQ9H019 292 aa23.58■■□□□ 1.36
CCDC189-212ENST00000546006 ATF7IPQ6VMQ6 1270 aa23.57■■□□□ 1.36
CCDC189-212ENST00000546006 MYD88Q99836 296 aa23.56■■□□□ 1.36
CCDC189-212ENST00000546006 TM4SF1P30408 202 aa23.55■■□□□ 1.36
CCDC189-212ENST00000546006 NFIXQ14938 502 aa23.55■■□□□ 1.36
CCDC189-212ENST00000546006 BICDL1Q6ZP65 573 aa23.55■■□□□ 1.36
CCDC189-212ENST00000546006 ZNF34Q8IZ26 560 aa23.55■■□□□ 1.36
CCDC189-212ENST00000546006 NIP7Q9Y221 180 aaKnown RBP eCLIP23.55■■□□□ 1.36
CCDC189-212ENST00000546006 SRCAPQ6ZRS2 3230 aa23.55■■□□□ 1.36
CCDC189-212ENST00000546006 TRIM27P14373 513 aa23.54■■□□□ 1.36
CCDC189-212ENST00000546006 NEXNQ0ZGT2 675 aa23.54■■□□□ 1.36
CCDC189-212ENST00000546006 ISCA1Q9BUE6 129 aa23.54■■□□□ 1.36
CCDC189-212ENST00000546006 GPTP24298 496 aa23.54■■□□□ 1.36
CCDC189-212ENST00000546006 SLC4A10Q6U841 1118 aa23.54■■□□□ 1.36
CCDC189-212ENST00000546006 SETDB2Q96T68 719 aa23.54■■□□□ 1.36
CCDC189-212ENST00000546006 ATP5J2-PTCD1G3V325 749 aa23.53■■□□□ 1.36
CCDC189-212ENST00000546006 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.53■■□□□ 1.36
CCDC189-212ENST00000546006 ATF5Q9Y2D1 282 aaPredicted RBP23.53■■□□□ 1.36
CCDC189-212ENST00000546006 UBN2Q6ZU65 1347 aa23.52■■□□□ 1.36
CCDC189-212ENST00000546006 PXDNLA1KZ92 1463 aa23.52■■□□□ 1.36
CCDC189-212ENST00000546006 ANKRD36CQ5JPF3 1778 aa23.52■■□□□ 1.36
CCDC189-212ENST00000546006 IGKV5-2P06315 115 aa23.52■■□□□ 1.36
CCDC189-212ENST00000546006 CENPBP07199 599 aaPredicted RBP23.52■■□□□ 1.36
CCDC189-212ENST00000546006 MMP10P09238 476 aa23.52■■□□□ 1.36
CCDC189-212ENST00000546006 TRIM28Q13263 835 aaKnown RBP23.52■■□□□ 1.36
CCDC189-212ENST00000546006 PARP10Q53GL7 1025 aa23.52■■□□□ 1.36
CCDC189-212ENST00000546006 BEND3Q5T5X7 828 aa23.52■■□□□ 1.36
CCDC189-212ENST00000546006 TNNQ9UQP3 1299 aa23.52■■□□□ 1.36
CCDC189-212ENST00000546006 ABCC4O15439 1325 aa23.52■■□□□ 1.36
CCDC189-212ENST00000546006 CARMIL3Q8ND23 1372 aa23.51■■□□□ 1.35
CCDC189-212ENST00000546006 PLIN1O60240 522 aa23.51■■□□□ 1.35
CCDC189-212ENST00000546006 DDR1Q08345 913 aa23.51■■□□□ 1.35
CCDC189-212ENST00000546006 LINS1Q8NG48 757 aa23.51■■□□□ 1.35
CCDC189-212ENST00000546006 COL24A1Q17RW2 1714 aa23.51■■□□□ 1.35
CCDC189-212ENST00000546006 POLRMTO00411 1230 aaKnown RBP23.5■■□□□ 1.35
CCDC189-212ENST00000546006 NLRP10Q86W26 655 aa23.5■■□□□ 1.35
CCDC189-212ENST00000546006 CLUAP1Q96AJ1 413 aa23.5■■□□□ 1.35
CCDC189-212ENST00000546006 NEURL1BA8MQ27 555 aa23.49■■□□□ 1.35
CCDC189-212ENST00000546006 CWF19L2Q2TBE0 894 aaKnown RBP23.49■■□□□ 1.35
CCDC189-212ENST00000546006 CCDC191Q8NCU4 936 aa23.49■■□□□ 1.35
CCDC189-212ENST00000546006 RRP1P56182 461 aaKnown RBP23.49■■□□□ 1.35
CCDC189-212ENST00000546006 SUSD4Q5VX71 490 aa23.49■■□□□ 1.35
CCDC189-212ENST00000546006 FTSJ3Q8IY81 847 aaKnown RBP23.49■■□□□ 1.35
CCDC189-212ENST00000546006 DZIP1LQ8IYY4 767 aaKnown RBP23.49■■□□□ 1.35
CCDC189-212ENST00000546006 SRCIN1Q9C0H9 1055 aa23.49■■□□□ 1.35
CCDC189-212ENST00000546006 PARP3Q9Y6F1 533 aa23.49■■□□□ 1.35
CCDC189-212ENST00000546006 POLD1P28340 1107 aa23.48■■□□□ 1.35
CCDC189-212ENST00000546006 CCT4P50991 539 aaKnown RBP23.48■■□□□ 1.35
CCDC189-212ENST00000546006 SGIP1Q9BQI5 828 aa23.48■■□□□ 1.35
CCDC189-212ENST00000546006 SPON1Q9HCB6 807 aa23.48■■□□□ 1.35
CCDC189-212ENST00000546006 CWC25Q9NXE8 425 aaPredicted RBP23.48■■□□□ 1.35
CCDC189-212ENST00000546006 ALDH1L1O75891 902 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms