RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 NUP98P52948 1817 aa26.36■■□□□ 1.81
HMGA2-211ENST00000545998 XAGE3Q8WTP9 111 aa26.36■■□□□ 1.81
HMGA2-211ENST00000545998 MAP3K15Q6ZN16 1313 aa26.35■■□□□ 1.81
HMGA2-211ENST00000545998 KIF6Q6ZMV9 814 aa26.35■■□□□ 1.81
HMGA2-211ENST00000545998 COPS6Q7L5N1 327 aa26.35■■□□□ 1.81
HMGA2-211ENST00000545998 ERVV-1B6SEH8 477 aa26.34■■□□□ 1.81
HMGA2-211ENST00000545998 RGL2O15211 777 aa26.34■■□□□ 1.81
HMGA2-211ENST00000545998 TCERG1O14776 1098 aaKnown RBP26.33■■□□□ 1.81
HMGA2-211ENST00000545998 MMP10P09238 476 aa26.33■■□□□ 1.81
HMGA2-211ENST00000545998 TM4SF1P30408 202 aa26.33■■□□□ 1.81
HMGA2-211ENST00000545998 AIMP1Q12904 312 aaKnown RBP26.33■■□□□ 1.81
HMGA2-211ENST00000545998 CLEC4GQ6UXB4 293 aa26.33■■□□□ 1.81
HMGA2-211ENST00000545998 STK31Q9BXU1 1019 aa26.33■■□□□ 1.81
HMGA2-211ENST00000545998 HLFQ16534 295 aa26.33■■□□□ 1.8
HMGA2-211ENST00000545998 NFIXQ14938 502 aa26.32■■□□□ 1.8
HMGA2-211ENST00000545998 ZBTB3Q9H5J0 574 aa26.32■■□□□ 1.8
HMGA2-211ENST00000545998 PHAXQ9H814 394 aaKnown RBP26.32■■□□□ 1.8
HMGA2-211ENST00000545998 ZNF652Q9Y2D9 606 aa26.32■■□□□ 1.8
HMGA2-211ENST00000545998 TBC1D9BQ66K14 1250 aa26.31■■□□□ 1.8
HMGA2-211ENST00000545998 SLC4A2P04920 1241 aa26.3■■□□□ 1.8
HMGA2-211ENST00000545998 DDR1Q08345 913 aa26.3■■□□□ 1.8
HMGA2-211ENST00000545998 AFDNP55196 1824 aaKnown RBP26.29■■□□□ 1.8
HMGA2-211ENST00000545998 POLRMTO00411 1230 aaKnown RBP26.29■■□□□ 1.8
HMGA2-211ENST00000545998 CT47B1P0C2W7 299 aaPredicted RBP26.28■■□□□ 1.8
HMGA2-211ENST00000545998 GIGYF2Q6Y7W6 1299 aaKnown RBP26.28■■□□□ 1.8
HMGA2-211ENST00000545998 PPP1R1BQ9UD71 204 aaPredicted RBP26.28■■□□□ 1.8
HMGA2-211ENST00000545998 PARP3Q9Y6F1 533 aa26.28■■□□□ 1.8
HMGA2-211ENST00000545998 BICDL1Q6ZP65 573 aa26.27■■□□□ 1.8
HMGA2-211ENST00000545998 PLBD2Q8NHP8 589 aa26.27■■□□□ 1.8
HMGA2-211ENST00000545998 ZNF428Q96B54 188 aa26.27■■□□□ 1.8
HMGA2-211ENST00000545998 NRXN2Q9P2S2 1712 aa26.27■■□□□ 1.8
HMGA2-211ENST00000545998 ARFGEF2Q9Y6D5 1785 aa26.27■■□□□ 1.8
HMGA2-211ENST00000545998 ATP10DQ9P241 1426 aa26.26■■□□□ 1.79
HMGA2-211ENST00000545998 GOLGB1Q14789 3259 aaKnown RBP26.26■■□□□ 1.79
HMGA2-211ENST00000545998 ANKRD13DQ6ZTN6 518 aa26.26■■□□□ 1.79
HMGA2-211ENST00000545998 G2E3Q7L622 706 aa26.26■■□□□ 1.79
HMGA2-211ENST00000545998 ANKRD36CQ5JPF3 1778 aa26.26■■□□□ 1.79
HMGA2-211ENST00000545998 SETDB2Q96T68 719 aa26.25■■□□□ 1.79
HMGA2-211ENST00000545998 CARMIL3Q8ND23 1372 aa26.25■■□□□ 1.79
HMGA2-211ENST00000545998 NIP7Q9Y221 180 aaKnown RBP eCLIP26.24■■□□□ 1.79
HMGA2-211ENST00000545998 KIF13BQ9NQT8 1826 aa26.23■■□□□ 1.79
HMGA2-211ENST00000545998 FLIIQ13045 1269 aa26.23■■□□□ 1.79
HMGA2-211ENST00000545998 DDX58O95786 925 aaKnown RBP26.22■■□□□ 1.79
HMGA2-211ENST00000545998 ZNF34Q8IZ26 560 aa26.22■■□□□ 1.79
HMGA2-211ENST00000545998 SSH1Q8WYL5 1049 aa26.22■■□□□ 1.79
HMGA2-211ENST00000545998 SERPINB2P05120 415 aa26.21■■□□□ 1.79
HMGA2-211ENST00000545998 ALDH1L2Q3SY69 923 aa26.21■■□□□ 1.79
HMGA2-211ENST00000545998 RIC3Q7Z5B4 369 aa26.21■■□□□ 1.79
HMGA2-211ENST00000545998 YTHDC1Q96MU7 727 aaKnown RBP26.21■■□□□ 1.79
HMGA2-211ENST00000545998 HSP90AB3PQ58FF7 597 aa26.2■■□□□ 1.79
HMGA2-211ENST00000545998 MRPL50Q8N5N7 158 aaKnown RBP26.2■■□□□ 1.79
HMGA2-211ENST00000545998 FHDC1Q9C0D6 1143 aaPredicted RBP26.2■■□□□ 1.79
HMGA2-211ENST00000545998 C10orf71Q711Q0 1435 aa26.2■■□□□ 1.78
HMGA2-211ENST00000545998 UBN2Q6ZU65 1347 aa26.2■■□□□ 1.78
HMGA2-211ENST00000545998 GPTP24298 496 aa26.2■■□□□ 1.78
HMGA2-211ENST00000545998 TCIRG1Q13488 830 aa26.2■■□□□ 1.78
HMGA2-211ENST00000545998 ADCY9O60503 1353 aa26.19■■□□□ 1.78
HMGA2-211ENST00000545998 PI4KAP2A4QPH2 592 aa26.19■■□□□ 1.78
HMGA2-211ENST00000545998 KSR2Q6VAB6 950 aa26.19■■□□□ 1.78
HMGA2-211ENST00000545998 PI4KAP1Q8N8J0 262 aa26.19■■□□□ 1.78
HMGA2-211ENST00000545998 RARSP54136 660 aaKnown RBP26.17■■□□□ 1.78
HMGA2-211ENST00000545998 FKBP5Q13451 457 aaPredicted RBP26.17■■□□□ 1.78
HMGA2-211ENST00000545998 BCL2L13Q9BXK5 485 aa26.17■■□□□ 1.78
HMGA2-211ENST00000545998 CD2APQ9Y5K6 639 aa26.17■■□□□ 1.78
HMGA2-211ENST00000545998 NBPF5PQ86XG9 351 aaPredicted RBP26.16■■□□□ 1.78
HMGA2-211ENST00000545998 MAP3K2Q9Y2U5 619 aa26.16■■□□□ 1.78
HMGA2-211ENST00000545998 PARP10Q53GL7 1025 aa26.16■■□□□ 1.78
HMGA2-211ENST00000545998 PRR5LQ6MZQ0 368 aa26.16■■□□□ 1.78
HMGA2-211ENST00000545998 KLHL34Q8N239 644 aa26.16■■□□□ 1.78
HMGA2-211ENST00000545998 SYT17Q9BSW7 474 aa26.16■■□□□ 1.78
HMGA2-211ENST00000545998 ISCA1Q9BUE6 129 aa26.16■■□□□ 1.78
HMGA2-211ENST00000545998 SMC4Q9NTJ3 1288 aa26.16■■□□□ 1.78
HMGA2-211ENST00000545998 UTRNP46939 3433 aa26.15■■□□□ 1.78
HMGA2-211ENST00000545998 CNBD1Q8NA66 436 aa26.15■■□□□ 1.78
HMGA2-211ENST00000545998 METTL22Q9BUU2 404 aaPredicted RBP26.15■■□□□ 1.78
HMGA2-211ENST00000545998 SUSD4Q5VX71 490 aa26.14■■□□□ 1.78
HMGA2-211ENST00000545998 NLRP10Q86W26 655 aa26.14■■□□□ 1.78
HMGA2-211ENST00000545998 IBTKQ9P2D0 1353 aaPredicted RBP26.14■■□□□ 1.77
HMGA2-211ENST00000545998 ANKRD31Q8N7Z5 1873 aa26.14■■□□□ 1.77
HMGA2-211ENST00000545998 FAM177BA6PVY3 158 aa26.13■■□□□ 1.77
HMGA2-211ENST00000545998 BRPF1P55201 1214 aaPredicted RBP26.13■■□□□ 1.77
HMGA2-211ENST00000545998 TRIM28Q13263 835 aaKnown RBP26.13■■□□□ 1.77
HMGA2-211ENST00000545998 TPTE2Q6XPS3 522 aa26.13■■□□□ 1.77
HMGA2-211ENST00000545998 MYD88Q99836 296 aa26.13■■□□□ 1.77
HMGA2-211ENST00000545998 KIAA1551Q9HCM1 1747 aa26.13■■□□□ 1.77
HMGA2-211ENST00000545998 ATP5J2-PTCD1G3V325 749 aa26.12■■□□□ 1.77
HMGA2-211ENST00000545998 NYXQ9GZU5 481 aa26.12■■□□□ 1.77
HMGA2-211ENST00000545998 PPP1R42Q7Z4L9 355 aa26.12■■□□□ 1.77
HMGA2-211ENST00000545998 NTSR2O95665 410 aa26.11■■□□□ 1.77
HMGA2-211ENST00000545998 CCDC24Q8N4L8 307 aa26.11■■□□□ 1.77
HMGA2-211ENST00000545998 NLGN2Q8NFZ4 835 aa26.11■■□□□ 1.77
HMGA2-211ENST00000545998 DNAAF4Q8WXU2 420 aa26.11■■□□□ 1.77
HMGA2-211ENST00000545998 PTPRCP08575 1304 aa26.1■■□□□ 1.77
HMGA2-211ENST00000545998 N4BP2Q86UW6 1770 aaPredicted RBP26.1■■□□□ 1.77
HMGA2-211ENST00000545998 NPHP1O15259 732 aa26.1■■□□□ 1.77
HMGA2-211ENST00000545998 ST5P78524 1137 aa26.1■■□□□ 1.77
HMGA2-211ENST00000545998 F6X3S4 739 aa26.09■■□□□ 1.77
HMGA2-211ENST00000545998 UTP14AQ9BVJ6 771 aaKnown RBP26.09■■□□□ 1.77
HMGA2-211ENST00000545998 IGKV5-2P06315 115 aa26.08■■□□□ 1.77
HMGA2-211ENST00000545998 NEXNQ0ZGT2 675 aa26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms