RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 BTBD11A6QL63 1104 aa22.41■■□□□ 1.18
CPSF7-225ENST00000545934 TAOK3Q9H2K8 898 aa22.41■■□□□ 1.18
CPSF7-225ENST00000545934 ZNF219Q9P2Y4 722 aaPredicted RBP22.41■■□□□ 1.18
CPSF7-225ENST00000545934 USP16Q9Y5T5 823 aa22.41■■□□□ 1.18
CPSF7-225ENST00000545934 PRKAR2BP31323 418 aa22.4■■□□□ 1.18
CPSF7-225ENST00000545934 DZIP3Q86Y13 1208 aaKnown RBP22.4■■□□□ 1.18
CPSF7-225ENST00000545934 NUP98P52948 1817 aa22.4■■□□□ 1.18
CPSF7-225ENST00000545934 ST5P78524 1137 aa22.39■■□□□ 1.17
CPSF7-225ENST00000545934 PRPF40BQ6NWY9 871 aaKnown RBP22.39■■□□□ 1.17
CPSF7-225ENST00000545934 MASTLQ96GX5 879 aa22.39■■□□□ 1.17
CPSF7-225ENST00000545934 KDM3BQ7LBC6 1761 aa22.39■■□□□ 1.17
CPSF7-225ENST00000545934 ADAMTSL1Q8N6G6 1762 aa22.39■■□□□ 1.17
CPSF7-225ENST00000545934 SOGA3Q5TF21 947 aa22.38■■□□□ 1.17
CPSF7-225ENST00000545934 CLEC4GQ6UXB4 293 aa22.38■■□□□ 1.17
CPSF7-225ENST00000545934 C7orf43Q8WVR3 580 aa22.38■■□□□ 1.17
CPSF7-225ENST00000545934 PRAMEF22A3QJZ6 481 aa22.37■■□□□ 1.17
CPSF7-225ENST00000545934 HSPA1AP0DMV8 641 aaKnown RBP22.37■■□□□ 1.17
CPSF7-225ENST00000545934 HSPA1BP0DMV9 641 aaKnown RBP22.37■■□□□ 1.17
CPSF7-225ENST00000545934 KLRG2A4D1S0 409 aaPredicted RBP22.36■■□□□ 1.17
CPSF7-225ENST00000545934 RGL2O15211 777 aa22.36■■□□□ 1.17
CPSF7-225ENST00000545934 DDNO94850 711 aaPredicted RBP22.36■■□□□ 1.17
CPSF7-225ENST00000545934 CHADLQ6NUI6 762 aa22.36■■□□□ 1.17
CPSF7-225ENST00000545934 NPM2Q86SE8 214 aaKnown RBP22.36■■□□□ 1.17
CPSF7-225ENST00000545934 PIP4K2AP48426 406 aaPredicted RBP22.35■■□□□ 1.17
CPSF7-225ENST00000545934 CNGB1Q14028 1251 aaPredicted RBP22.35■■□□□ 1.17
CPSF7-225ENST00000545934 SNRPA1P09661 255 aaKnown RBP22.34■■□□□ 1.17
CPSF7-225ENST00000545934 POTEIP0CG38 1075 aa22.34■■□□□ 1.17
CPSF7-225ENST00000545934 POTEJP0CG39 1038 aa22.34■■□□□ 1.17
CPSF7-225ENST00000545934 TNS4Q8IZW8 715 aa22.34■■□□□ 1.17
CPSF7-225ENST00000545934 CFAP53Q96M91 514 aa22.34■■□□□ 1.17
CPSF7-225ENST00000545934 CREBZFQ9NS37 354 aa22.34■■□□□ 1.17
CPSF7-225ENST00000545934 NBPF26B4DH59 902 aa22.33■■□□□ 1.17
CPSF7-225ENST00000545934 NBPF10Q6P3W6 841 aaKnown RBP22.33■■□□□ 1.17
CPSF7-225ENST00000545934 NBPF15Q8N660 670 aa22.33■■□□□ 1.17
CPSF7-225ENST00000545934 L3MBTL3Q96JM7 780 aaPredicted RBP22.33■■□□□ 1.17
CPSF7-225ENST00000545934 NPHP1O15259 732 aa22.32■■□□□ 1.16
CPSF7-225ENST00000545934 MCM10Q7L590 875 aa22.32■■□□□ 1.16
CPSF7-225ENST00000545934 NBPF5PQ86XG9 351 aaPredicted RBP22.32■■□□□ 1.16
CPSF7-225ENST00000545934 ZNF652Q9Y2D9 606 aa22.32■■□□□ 1.16
CPSF7-225ENST00000545934 NPR1P16066 1061 aa22.31■■□□□ 1.16
CPSF7-225ENST00000545934 SNED1Q8TER0 1413 aa22.31■■□□□ 1.16
CPSF7-225ENST00000545934 PASKQ96RG2 1323 aa22.31■■□□□ 1.16
CPSF7-225ENST00000545934 CCDC93Q567U6 631 aa22.3■■□□□ 1.16
CPSF7-225ENST00000545934 NUDCQ9Y266 331 aa22.3■■□□□ 1.16
CPSF7-225ENST00000545934 HTATSF1O43719 755 aaKnown RBP22.29■■□□□ 1.16
CPSF7-225ENST00000545934 IQCA1LA6NCM1 817 aa22.28■■□□□ 1.16
CPSF7-225ENST00000545934 PPP2R1AP30153 589 aa22.28■■□□□ 1.16
CPSF7-225ENST00000545934 FKBP4Q02790 459 aaKnown RBP eCLIP22.28■■□□□ 1.16
CPSF7-225ENST00000545934 TPTE2Q6XPS3 522 aa22.28■■□□□ 1.16
CPSF7-225ENST00000545934 RTF1Q92541 710 aaKnown RBP22.28■■□□□ 1.16
CPSF7-225ENST00000545934 TAF1DQ9H5J8 278 aaPredicted RBP22.28■■□□□ 1.16
CPSF7-225ENST00000545934 U2AF1L5P0DN76 240 aaPredicted RBP22.27■■□□□ 1.16
CPSF7-225ENST00000545934 U2AF1Q01081 240 aaKnown RBP eCLIP22.27■■□□□ 1.16
CPSF7-225ENST00000545934 DCTN1Q14203 1278 aa22.27■■□□□ 1.16
CPSF7-225ENST00000545934 LDHDQ86WU2 507 aa22.27■■□□□ 1.16
CPSF7-225ENST00000545934 NIP7Q9Y221 180 aaKnown RBP eCLIP22.27■■□□□ 1.16
CPSF7-225ENST00000545934 ZNF541Q9H0D2 1346 aa22.27■■□□□ 1.16
CPSF7-225ENST00000545934 CNTNAP1P78357 1384 aa22.26■■□□□ 1.15
CPSF7-225ENST00000545934 HLFQ16534 295 aa22.26■■□□□ 1.15
CPSF7-225ENST00000545934 MKRN1Q9UHC7 482 aaKnown RBP22.26■■□□□ 1.15
CPSF7-225ENST00000545934 CAPN15O75808 1086 aa22.25■■□□□ 1.15
CPSF7-225ENST00000545934 ITGBL1O95965 494 aaPredicted RBP22.25■■□□□ 1.15
CPSF7-225ENST00000545934 OLFM4Q6UX06 510 aa22.25■■□□□ 1.15
CPSF7-225ENST00000545934 LTBP1Q14766 1721 aa22.24■■□□□ 1.15
CPSF7-225ENST00000545934 TAF7Q15545 349 aaPredicted RBP22.24■■□□□ 1.15
CPSF7-225ENST00000545934 RTKN2Q8IZC4 609 aa22.24■■□□□ 1.15
CPSF7-225ENST00000545934 ZNF277Q9NRM2 450 aaPredicted RBP22.24■■□□□ 1.15
CPSF7-225ENST00000545934 COL4A5P29400 1685 aa22.23■■□□□ 1.15
CPSF7-225ENST00000545934 RIC1Q4ADV7 1423 aa22.23■■□□□ 1.15
CPSF7-225ENST00000545934 CRY2Q49AN0 593 aa22.23■■□□□ 1.15
CPSF7-225ENST00000545934 FZD9O00144 591 aa22.22■■□□□ 1.15
CPSF7-225ENST00000545934 ALDH1B1P30837 517 aa22.22■■□□□ 1.15
CPSF7-225ENST00000545934 ABCC12Q96J65 1359 aa22.22■■□□□ 1.15
CPSF7-225ENST00000545934 TRPM7Q96QT4 1865 aa22.21■■□□□ 1.15
CPSF7-225ENST00000545934 ANKRD36CQ5JPF3 1778 aa22.2■■□□□ 1.14
CPSF7-225ENST00000545934 IARSP41252 1262 aaKnown RBP22.2■■□□□ 1.14
CPSF7-225ENST00000545934 HACL1Q9UJ83 578 aa22.2■■□□□ 1.14
CPSF7-225ENST00000545934 LAMB2P55268 1798 aa22.2■■□□□ 1.14
CPSF7-225ENST00000545934 FAM177BA6PVY3 158 aa22.19■■□□□ 1.14
CPSF7-225ENST00000545934 ERVV-1B6SEH8 477 aa22.19■■□□□ 1.14
CPSF7-225ENST00000545934 SYNE4Q8N205 404 aa22.19■■□□□ 1.14
CPSF7-225ENST00000545934 PSMD1Q99460 953 aa22.19■■□□□ 1.14
CPSF7-225ENST00000545934 MIS18AQ9NYP9 233 aa22.19■■□□□ 1.14
CPSF7-225ENST00000545934 IBTKQ9P2D0 1353 aaPredicted RBP22.19■■□□□ 1.14
CPSF7-225ENST00000545934 THSD7BQ9C0I4 1608 aa22.18■■□□□ 1.14
CPSF7-225ENST00000545934 TMEM88BA6NKF7 163 aa22.18■■□□□ 1.14
CPSF7-225ENST00000545934 FOXN1O15353 648 aa22.18■■□□□ 1.14
CPSF7-225ENST00000545934 EPHX2P34913 555 aa22.18■■□□□ 1.14
CPSF7-225ENST00000545934 MAP3K15Q6ZN16 1313 aa22.17■■□□□ 1.14
CPSF7-225ENST00000545934 HOXA10P31260 410 aaPredicted RBP22.17■■□□□ 1.14
CPSF7-225ENST00000545934 GPC2Q8N158 579 aa22.17■■□□□ 1.14
CPSF7-225ENST00000545934 NYXQ9GZU5 481 aa22.17■■□□□ 1.14
CPSF7-225ENST00000545934 RNF123Q5XPI4 1314 aa22.16■■□□□ 1.14
CPSF7-225ENST00000545934 EAPPQ56P03 285 aaPredicted RBP22.16■■□□□ 1.14
CPSF7-225ENST00000545934 PNMA8AQ86V59 439 aaPredicted RBP22.16■■□□□ 1.14
CPSF7-225ENST00000545934 PNISRQ8TF01 805 aaKnown RBP22.16■■□□□ 1.14
CPSF7-225ENST00000545934 GTF2E1P29083 439 aaPredicted RBP22.15■■□□□ 1.14
CPSF7-225ENST00000545934 VEGFBP49765 207 aa22.15■■□□□ 1.14
CPSF7-225ENST00000545934 CC2D2BQ6DHV5 1058 aa22.15■■□□□ 1.14
CPSF7-225ENST00000545934 NUTM1Q86Y26 1132 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms