RNA–Protein interactions for RNA: ENST00000545913.5

CIT-217, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 8,520 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-217ENST00000545913 BAG4O95429 457 aaKnown RBP13.53□□□□□ -0.24
CIT-217ENST00000545913 CALML4Q96GE6 196 aa13.53□□□□□ -0.24
CIT-217ENST00000545913 GSTTP1A0A1W2PQM5 241 aa13.52□□□□□ -0.24
CIT-217ENST00000545913 KIF4BQ2VIQ3 1234 aa13.52□□□□□ -0.24
CIT-217ENST00000545913 YEATS4O95619 227 aa13.52□□□□□ -0.24
CIT-217ENST00000545913 IFFO1Q0D2I5 559 aa13.52□□□□□ -0.24
CIT-217ENST00000545913 CCDC178Q5BJE1 867 aa13.52□□□□□ -0.24
CIT-217ENST00000545913 HOOK3Q86VS8 718 aa13.52□□□□□ -0.24
CIT-217ENST00000545913 NAA15Q9BXJ9 866 aaKnown RBP13.52□□□□□ -0.24
CIT-217ENST00000545913 TCP11L1Q9NUJ3 509 aa13.52□□□□□ -0.24
CIT-217ENST00000545913 NCOA1Q15788 1441 aa13.52□□□□□ -0.24
CIT-217ENST00000545913 GOLGA6L9A6NEM1 432 aa13.52□□□□□ -0.24
CIT-217ENST00000545913 FAM114A1Q8IWE2 563 aa13.52□□□□□ -0.24
CIT-217ENST00000545913 ALS2CR12Q96Q35 445 aa13.52□□□□□ -0.24
CIT-217ENST00000545913 TTC21AQ8NDW8 1320 aa13.52□□□□□ -0.25
CIT-217ENST00000545913 HMG20BQ9P0W2 317 aa13.52□□□□□ -0.25
CIT-217ENST00000545913 NLRP5P59047 1200 aa13.52□□□□□ -0.25
CIT-217ENST00000545913 TRMT112Q9UI30 125 aaKnown RBP13.52□□□□□ -0.25
CIT-217ENST00000545913 STAMBPO95630 424 aa13.51□□□□□ -0.25
CIT-217ENST00000545913 STXBP4Q6ZWJ1 553 aa13.51□□□□□ -0.25
CIT-217ENST00000545913 THUMPD2Q9BTF0 503 aaKnown RBP13.51□□□□□ -0.25
CIT-217ENST00000545913 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.51□□□□□ -0.25
CIT-217ENST00000545913 RAPGEF6Q8TEU7 1601 aa13.51□□□□□ -0.25
CIT-217ENST00000545913 PDE4BQ07343 736 aa13.51□□□□□ -0.25
CIT-217ENST00000545913 MPRIPQ6WCQ1 1025 aa13.51□□□□□ -0.25
CIT-217ENST00000545913 WAPLQ7Z5K2 1190 aa13.51□□□□□ -0.25
CIT-217ENST00000545913 GOLGA6L10A0A0M3HER8 536 aa13.51□□□□□ -0.25
CIT-217ENST00000545913 CCDC113Q9H0I3 377 aa13.51□□□□□ -0.25
CIT-217ENST00000545913 CCDC97Q96F63 343 aaPredicted RBP13.51□□□□□ -0.25
CIT-217ENST00000545913 TEX13AQ9BXU3 409 aaPredicted RBP13.51□□□□□ -0.25
CIT-217ENST00000545913 CDC5LQ99459 802 aaKnown RBP13.51□□□□□ -0.25
CIT-217ENST00000545913 PIK3R4Q99570 1358 aa13.51□□□□□ -0.25
CIT-217ENST00000545913 POTEB2H3BUK9 544 aa13.51□□□□□ -0.25
CIT-217ENST00000545913 PRKCSHP14314 528 aaPredicted RBP13.51□□□□□ -0.25
CIT-217ENST00000545913 BAG3O95817 575 aa13.5□□□□□ -0.25
CIT-217ENST00000545913 GOPCQ9HD26 462 aa13.5□□□□□ -0.25
CIT-217ENST00000545913 ASXL1Q8IXJ9 1541 aa13.5□□□□□ -0.25
CIT-217ENST00000545913 CGNQ9P2M7 1197 aaKnown RBP13.5□□□□□ -0.25
CIT-217ENST00000545913 ABCC5O15440 1437 aa13.5□□□□□ -0.25
CIT-217ENST00000545913 GOLGA8AA7E2F4 631 aa13.5□□□□□ -0.25
CIT-217ENST00000545913 CWC25Q9NXE8 425 aaPredicted RBP13.5□□□□□ -0.25
CIT-217ENST00000545913 FLIIQ13045 1269 aa13.49□□□□□ -0.25
CIT-217ENST00000545913 FSIP1Q8NA03 581 aa13.49□□□□□ -0.25
CIT-217ENST00000545913 SPTY2D1Q68D10 685 aaPredicted RBP13.49□□□□□ -0.25
CIT-217ENST00000545913 ERICH4A6NGS2 130 aa13.49□□□□□ -0.25
CIT-217ENST00000545913 TDRD12Q587J7 1177 aaKnown RBP13.49□□□□□ -0.25
CIT-217ENST00000545913 THOC2Q8NI27 1593 aaKnown RBP13.49□□□□□ -0.25
CIT-217ENST00000545913 FAM107BQ9H098 131 aa13.49□□□□□ -0.25
CIT-217ENST00000545913 URI1O94763 535 aaPredicted RBP13.49□□□□□ -0.25
CIT-217ENST00000545913 KIF21AQ7Z4S6 1674 aa13.48□□□□□ -0.25
CIT-217ENST00000545913 WASLO00401 505 aaPredicted RBP13.48□□□□□ -0.25
CIT-217ENST00000545913 TRIM27P14373 513 aa13.48□□□□□ -0.25
CIT-217ENST00000545913 NF2P35240 595 aa13.48□□□□□ -0.25
CIT-217ENST00000545913 GUCY1B3Q02153 619 aa13.48□□□□□ -0.25
CIT-217ENST00000545913 BMP2KLQ5H9B9 411 aa13.48□□□□□ -0.25
CIT-217ENST00000545913 MICALCLQ6ZW33 695 aa13.48□□□□□ -0.25
CIT-217ENST00000545913 STX6O43752 255 aa13.48□□□□□ -0.25
CIT-217ENST00000545913 CTNNA2P26232 953 aa13.48□□□□□ -0.25
CIT-217ENST00000545913 UBE2HP62256 183 aa13.48□□□□□ -0.25
CIT-217ENST00000545913 TMEM67Q5HYA8 995 aa13.48□□□□□ -0.25
CIT-217ENST00000545913 CCDC8Q9H0W5 538 aaPredicted RBP13.48□□□□□ -0.25
CIT-217ENST00000545913 RPRD2Q5VT52 1461 aaKnown RBP13.48□□□□□ -0.25
CIT-217ENST00000545913 LRRC27Q9C0I9 530 aa13.48□□□□□ -0.25
CIT-217ENST00000545913 MAP3K2Q9Y2U5 619 aa13.48□□□□□ -0.25
CIT-217ENST00000545913 MTIF2P46199 727 aaKnown RBP13.48□□□□□ -0.25
CIT-217ENST00000545913 ZSCAN16Q9H4T2 348 aaPredicted RBP13.48□□□□□ -0.25
CIT-217ENST00000545913 MFSD6Q6ZSS7 791 aa13.48□□□□□ -0.25
CIT-217ENST00000545913 ECHDC1Q9NTX5 307 aa13.48□□□□□ -0.25
CIT-217ENST00000545913 CTNNBL1Q8WYA6 563 aaPredicted RBP13.48□□□□□ -0.25
CIT-217ENST00000545913 CCT2P78371 535 aaKnown RBP13.47□□□□□ -0.25
CIT-217ENST00000545913 CCDC184Q52MB2 194 aa13.47□□□□□ -0.25
CIT-217ENST00000545913 CCDC82Q8N4S0 544 aa13.47□□□□□ -0.25
CIT-217ENST00000545913 EHBP1Q8NDI1 1231 aa13.47□□□□□ -0.25
CIT-217ENST00000545913 SMC1AQ14683 1233 aaKnown RBP13.47□□□□□ -0.25
CIT-217ENST00000545913 FERMT1Q9BQL6 677 aa13.47□□□□□ -0.25
CIT-217ENST00000545913 F6X3S4 739 aa13.47□□□□□ -0.25
CIT-217ENST00000545913 FERMT2Q96AC1 680 aa13.47□□□□□ -0.25
CIT-217ENST00000545913 GJB2P29033 226 aa13.46□□□□□ -0.25
CIT-217ENST00000545913 IARSP41252 1262 aaKnown RBP13.46□□□□□ -0.25
CIT-217ENST00000545913 IL16Q14005 1332 aa13.46□□□□□ -0.25
CIT-217ENST00000545913 METAP2P50579 478 aaKnown RBP eCLIP13.46□□□□□ -0.25
CIT-217ENST00000545913 IFI16Q16666 785 aaKnown RBP13.46□□□□□ -0.25
CIT-217ENST00000545913 MACROD2A1Z1Q3 448 aa13.46□□□□□ -0.25
CIT-217ENST00000545913 HLA-DOAP06340 250 aa13.46□□□□□ -0.25
CIT-217ENST00000545913 MCM5P33992 734 aa13.46□□□□□ -0.25
CIT-217ENST00000545913 MPHOSPH6Q99547 160 aaKnown RBP13.46□□□□□ -0.25
CIT-217ENST00000545913 LDHCP07864 332 aa13.46□□□□□ -0.25
CIT-217ENST00000545913 TBC1D9Q6ZT07 1266 aa13.46□□□□□ -0.25
CIT-217ENST00000545913 KAT14Q9H8E8 782 aa13.46□□□□□ -0.25
CIT-217ENST00000545913 GOLIM4O00461 696 aa13.46□□□□□ -0.25
CIT-217ENST00000545913 CCDC172P0C7W6 258 aa13.46□□□□□ -0.25
CIT-217ENST00000545913 UBA7P41226 1012 aa13.46□□□□□ -0.25
CIT-217ENST00000545913 NME9Q86XW9 330 aa13.46□□□□□ -0.25
CIT-217ENST00000545913 CKAP2LQ8IYA6 745 aa13.46□□□□□ -0.25
CIT-217ENST00000545913 USHBP1Q8N6Y0 703 aa13.46□□□□□ -0.25
CIT-217ENST00000545913 NCOA7Q8NI08 942 aa13.46□□□□□ -0.25
CIT-217ENST00000545913 TNNT1P13805 278 aa13.46□□□□□ -0.26
CIT-217ENST00000545913 TNPO1Q92973 898 aaKnown RBP13.46□□□□□ -0.26
CIT-217ENST00000545913 PPP1R42Q7Z4L9 355 aa13.46□□□□□ -0.26
CIT-217ENST00000545913 GRIN2AQ12879 1464 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms