RNA–Protein interactions for RNA: ENST00000545209.1

SPPL3-209, Transcript of signal peptide peptidase like 3, humanhuman

TSL 1 (best)

Gene SPPL3, Length 797 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-209ENST00000545209 CLUAP1Q96AJ1 413 aa8.97□□□□□ -0.97
SPPL3-209ENST00000545209 COG6Q9Y2V7 657 aa8.97□□□□□ -0.97
SPPL3-209ENST00000545209 FAM83GA6ND36 823 aa8.96□□□□□ -0.98
SPPL3-209ENST00000545209 TCERG1O14776 1098 aaKnown RBP8.96□□□□□ -0.98
SPPL3-209ENST00000545209 BRPF1P55201 1214 aaPredicted RBP8.96□□□□□ -0.98
SPPL3-209ENST00000545209 DCTN1Q14203 1278 aa8.96□□□□□ -0.98
SPPL3-209ENST00000545209 MTHFSDQ2M296 383 aaKnown RBP8.96□□□□□ -0.98
SPPL3-209ENST00000545209 SWT1Q5T5J6 900 aaKnown RBP8.96□□□□□ -0.98
SPPL3-209ENST00000545209 ATF7IPQ6VMQ6 1270 aa8.96□□□□□ -0.98
SPPL3-209ENST00000545209 METTL3Q86U44 580 aaKnown RBP8.96□□□□□ -0.98
SPPL3-209ENST00000545209 ARHGEF25Q86VW2 580 aa8.96□□□□□ -0.98
SPPL3-209ENST00000545209 PXYLP1Q8TE99 480 aa8.96□□□□□ -0.98
SPPL3-209ENST00000545209 TSR3Q9UJK0 312 aaKnown RBP8.96□□□□□ -0.98
SPPL3-209ENST00000545209 HPS5Q9UPZ3 1129 aa8.96□□□□□ -0.98
SPPL3-209ENST00000545209 MAP3K5Q99683 1374 aa8.96□□□□□ -0.98
SPPL3-209ENST00000545209 STRCQ7RTU9 1775 aa8.96□□□□□ -0.98
SPPL3-209ENST00000545209 TNS3Q68CZ2 1445 aa8.96□□□□□ -0.98
SPPL3-209ENST00000545209 GNAT3A8MTJ3 354 aa8.95□□□□□ -0.98
SPPL3-209ENST00000545209 CHL1O00533 1208 aa8.95□□□□□ -0.98
SPPL3-209ENST00000545209 MVPQ14764 893 aaKnown RBP8.95□□□□□ -0.98
SPPL3-209ENST00000545209 TWISTNBQ3B726 338 aaPredicted RBP8.95□□□□□ -0.98
SPPL3-209ENST00000545209 MCM10Q7L590 875 aa8.95□□□□□ -0.98
SPPL3-209ENST00000545209 CHMP4BQ9H444 224 aaKnown RBP8.95□□□□□ -0.98
SPPL3-209ENST00000545209 WBP1LQ9NX94 342 aa8.95□□□□□ -0.98
SPPL3-209ENST00000545209 KIAA0232Q92628 1395 aa8.95□□□□□ -0.98
SPPL3-209ENST00000545209 ALS2Q96Q42 1657 aa8.94□□□□□ -0.98
SPPL3-209ENST00000545209 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.94□□□□□ -0.98
SPPL3-209ENST00000545209 VAMP4O75379 141 aa8.94□□□□□ -0.98
SPPL3-209ENST00000545209 TRIM27P14373 513 aa8.94□□□□□ -0.98
SPPL3-209ENST00000545209 PPP4CP60510 307 aa8.94□□□□□ -0.98
SPPL3-209ENST00000545209 MAP2K5Q13163 448 aa8.94□□□□□ -0.98
SPPL3-209ENST00000545209 NYAP1Q6ZVC0 841 aa8.94□□□□□ -0.98
SPPL3-209ENST00000545209 ARHGAP45Q92619 1136 aa8.94□□□□□ -0.98
SPPL3-209ENST00000545209 TMEM134Q9H6X4 195 aa8.94□□□□□ -0.98
SPPL3-209ENST00000545209 NOB1Q9ULX3 412 aaKnown RBP8.94□□□□□ -0.98
SPPL3-209ENST00000545209 DDX19BQ9UMR2 479 aa8.94□□□□□ -0.98
SPPL3-209ENST00000545209 KDM2BQ8NHM5 1336 aa8.94□□□□□ -0.98
SPPL3-209ENST00000545209 ZNF335Q9H4Z2 1342 aaPredicted RBP8.94□□□□□ -0.98
SPPL3-209ENST00000545209 CRB1P82279 1406 aa8.94□□□□□ -0.98
SPPL3-209ENST00000545209 RLBP1P12271 317 aa8.93□□□□□ -0.98
SPPL3-209ENST00000545209 AMOTQ4VCS5 1084 aa8.93□□□□□ -0.98
SPPL3-209ENST00000545209 PLEKHO1Q53GL0 409 aaPredicted RBP8.93□□□□□ -0.98
SPPL3-209ENST00000545209 ITPRIPQ8IWB1 547 aa8.93□□□□□ -0.98
SPPL3-209ENST00000545209 SLF2Q8IX21 1173 aa8.93□□□□□ -0.98
SPPL3-209ENST00000545209 ANKRD24Q8TF21 1146 aa8.93□□□□□ -0.98
SPPL3-209ENST00000545209 ZC3H15Q8WU90 426 aaKnown RBP8.93□□□□□ -0.98
SPPL3-209ENST00000545209 BABAM1Q9NWV8 329 aa8.93□□□□□ -0.98
SPPL3-209ENST00000545209 TSPYL4Q9UJ04 414 aa8.93□□□□□ -0.98
SPPL3-209ENST00000545209 RBM19Q9Y4C8 960 aaKnown RBP8.93□□□□□ -0.98
SPPL3-209ENST00000545209 PXDNQ92626 1479 aa8.93□□□□□ -0.98
SPPL3-209ENST00000545209 ABCC6O95255 1503 aa8.93□□□□□ -0.98
SPPL3-209ENST00000545209 MED1Q15648 1581 aaPredicted RBP8.92□□□□□ -0.98
SPPL3-209ENST00000545209 SPATA31A3Q5VYP0 1347 aa8.92□□□□□ -0.98
SPPL3-209ENST00000545209 IRF6O14896 467 aa8.92□□□□□ -0.98
SPPL3-209ENST00000545209 SLC4A3P48751 1232 aa8.92□□□□□ -0.98
SPPL3-209ENST00000545209 NBPF6Q5VWK0 638 aa8.92□□□□□ -0.98
SPPL3-209ENST00000545209 BRINP3Q76B58 766 aa8.92□□□□□ -0.98
SPPL3-209ENST00000545209 USHBP1Q8N6Y0 703 aa8.92□□□□□ -0.98
SPPL3-209ENST00000545209 TSPYL6Q8N831 410 aa8.92□□□□□ -0.98
SPPL3-209ENST00000545209 C8orf58Q8NAV2 365 aa8.92□□□□□ -0.98
SPPL3-209ENST00000545209 NBPF4Q96M43 638 aa8.92□□□□□ -0.98
SPPL3-209ENST00000545209 API5Q9BZZ5 524 aaKnown RBP8.92□□□□□ -0.98
SPPL3-209ENST00000545209 RWDD1Q9H446 243 aaPredicted RBP8.92□□□□□ -0.98
SPPL3-209ENST00000545209 SLAIN2Q9P270 581 aa8.92□□□□□ -0.98
SPPL3-209ENST00000545209 XIRP1Q702N8 1843 aaKnown RBP8.91□□□□□ -0.98
SPPL3-209ENST00000545209 LRRC37A3O60309 1634 aa8.91□□□□□ -0.98
SPPL3-209ENST00000545209 NCAPD2Q15021 1401 aa8.91□□□□□ -0.98
SPPL3-209ENST00000545209 SOS1Q07889 1333 aaPredicted RBP8.91□□□□□ -0.98
SPPL3-209ENST00000545209 ELL2O00472 640 aaPredicted RBP8.91□□□□□ -0.98
SPPL3-209ENST00000545209 RNF40O75150 1001 aa8.91□□□□□ -0.98
SPPL3-209ENST00000545209 ZC3H6P61129 1189 aaKnown RBP8.91□□□□□ -0.98
SPPL3-209ENST00000545209 TNNQ9UQP3 1299 aa8.91□□□□□ -0.98
SPPL3-209ENST00000545209 ZMYND10O75800 440 aa8.9□□□□□ -0.98
SPPL3-209ENST00000545209 TAF7Q15545 349 aaPredicted RBP8.9□□□□□ -0.98
SPPL3-209ENST00000545209 C1orf141Q5JVX7 400 aa8.9□□□□□ -0.98
SPPL3-209ENST00000545209 ZNF530Q6P9A1 599 aaPredicted RBP8.9□□□□□ -0.98
SPPL3-209ENST00000545209 BARGINQ6ZT62 677 aa8.9□□□□□ -0.98
SPPL3-209ENST00000545209 TMEM57Q8N5G2 664 aa8.9□□□□□ -0.98
SPPL3-209ENST00000545209 NECTIN2Q92692 538 aa8.9□□□□□ -0.98
SPPL3-209ENST00000545209 DDX17Q92841 729 aaKnown RBP8.9□□□□□ -0.98
SPPL3-209ENST00000545209 LRRC59Q96AG4 307 aaKnown RBP8.9□□□□□ -0.98
SPPL3-209ENST00000545209 PHOX2BQ99453 314 aa8.9□□□□□ -0.98
SPPL3-209ENST00000545209 CHMP4AQ9BY43 222 aa8.9□□□□□ -0.98
SPPL3-209ENST00000545209 CPDO75976 1380 aa8.89□□□□□ -0.99
SPPL3-209ENST00000545209 PLEKHG2Q9H7P9 1386 aa8.89□□□□□ -0.99
SPPL3-209ENST00000545209 CAMTA1Q9Y6Y1 1673 aa8.89□□□□□ -0.99
SPPL3-209ENST00000545209 CSB-PGBD3P0DP91 1061 aa8.89□□□□□ -0.99
SPPL3-209ENST00000545209 AKAP4Q5JQC9 854 aa8.89□□□□□ -0.99
SPPL3-209ENST00000545209 KRI1Q8N9T8 703 aaKnown RBP8.89□□□□□ -0.99
SPPL3-209ENST00000545209 RAPGEF4Q8WZA2 1011 aa8.89□□□□□ -0.99
SPPL3-209ENST00000545209 OVOS2A0A0G2JMS6 1433 aa8.88□□□□□ -0.99
SPPL3-209ENST00000545209 ABCC4O15439 1325 aa8.88□□□□□ -0.99
SPPL3-209ENST00000545209 PTPRCP08575 1304 aa8.88□□□□□ -0.99
SPPL3-209ENST00000545209 SOS2Q07890 1332 aaPredicted RBP8.88□□□□□ -0.99
SPPL3-209ENST00000545209 TEFQ10587 303 aa8.88□□□□□ -0.99
SPPL3-209ENST00000545209 IL17REQ8NFR9 667 aa8.88□□□□□ -0.99
SPPL3-209ENST00000545209 STK31Q9BXU1 1019 aa8.88□□□□□ -0.99
SPPL3-209ENST00000545209 NLRP2Q9NX02 1062 aa8.88□□□□□ -0.99
SPPL3-209ENST00000545209 FAM208AQ9UK61 1670 aaKnown RBP8.88□□□□□ -0.99
SPPL3-209ENST00000545209 CEMIPQ8WUJ3 1361 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms