RNA–Protein interactions for RNA: ENST00000545202.1

AP000439.3-201, humanhuman

TSL 2 BASIC

Gene AP000439.3, Length 2,376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000439.3-201ENST00000545202 ANKRD24Q8TF21 1146 aa18.82■□□□□ 0.6
AP000439.3-201ENST00000545202 DIAPH3Q9NSV4 1193 aa18.82■□□□□ 0.6
AP000439.3-201ENST00000545202 RPAP1Q9BWH6 1393 aaPredicted RBP18.81■□□□□ 0.6
AP000439.3-201ENST00000545202 GADD45BO75293 160 aaPredicted RBP18.81■□□□□ 0.6
AP000439.3-201ENST00000545202 MSNP26038 577 aaKnown RBP18.81■□□□□ 0.6
AP000439.3-201ENST00000545202 ECHDC1Q9NTX5 307 aa18.81■□□□□ 0.6
AP000439.3-201ENST00000545202 HEG1Q9ULI3 1381 aa18.81■□□□□ 0.6
AP000439.3-201ENST00000545202 LMOD2Q6P5Q4 547 aa18.81■□□□□ 0.6
AP000439.3-201ENST00000545202 RUFY3Q7L099 469 aa18.81■□□□□ 0.6
AP000439.3-201ENST00000545202 USP48Q86UV5 1035 aa18.81■□□□□ 0.6
AP000439.3-201ENST00000545202 LIMCH1Q9UPQ0 1083 aa18.81■□□□□ 0.6
AP000439.3-201ENST00000545202 CPA1P15085 419 aa18.8■□□□□ 0.6
AP000439.3-201ENST00000545202 IFIT2P09913 472 aaKnown RBP18.79■□□□□ 0.6
AP000439.3-201ENST00000545202 HS1BP3Q53T59 392 aa18.79■□□□□ 0.6
AP000439.3-201ENST00000545202 RUFY2Q8WXA3 655 aa18.79■□□□□ 0.6
AP000439.3-201ENST00000545202 CASTP20810 708 aaKnown RBP18.79■□□□□ 0.6
AP000439.3-201ENST00000545202 PTH1RQ03431 593 aa18.79■□□□□ 0.6
AP000439.3-201ENST00000545202 RNF214Q8ND24 703 aa18.79■□□□□ 0.6
AP000439.3-201ENST00000545202 OVOS2A0A0G2JMS6 1433 aa18.79■□□□□ 0.6
AP000439.3-201ENST00000545202 ERC1Q8IUD2 1116 aa18.78■□□□□ 0.6
AP000439.3-201ENST00000545202 SYAP1Q96A49 352 aaPredicted RBP18.78■□□□□ 0.6
AP000439.3-201ENST00000545202 GPATCH3Q96I76 525 aa18.78■□□□□ 0.6
AP000439.3-201ENST00000545202 HYPKQ9NX55 129 aa18.78■□□□□ 0.6
AP000439.3-201ENST00000545202 AXIN2Q9Y2T1 843 aa18.78■□□□□ 0.6
AP000439.3-201ENST00000545202 SIPA1L3O60292 1781 aaPredicted RBP18.78■□□□□ 0.6
AP000439.3-201ENST00000545202 HDAC5Q9UQL6 1122 aa18.78■□□□□ 0.6
AP000439.3-201ENST00000545202 SLIT3O75094 1523 aa18.77■□□□□ 0.6
AP000439.3-201ENST00000545202 AACSQ86V21 672 aa18.77■□□□□ 0.6
AP000439.3-201ENST00000545202 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.77■□□□□ 0.6
AP000439.3-201ENST00000545202 RGPD5Q99666 1765 aa18.77■□□□□ 0.6
AP000439.3-201ENST00000545202 GRM8O00222 908 aa18.77■□□□□ 0.6
AP000439.3-201ENST00000545202 AIMP1Q12904 312 aaKnown RBP18.77■□□□□ 0.6
AP000439.3-201ENST00000545202 LINS1Q8NG48 757 aa18.77■□□□□ 0.6
AP000439.3-201ENST00000545202 KAZALD1Q96I82 304 aa18.77■□□□□ 0.6
AP000439.3-201ENST00000545202 SUCLG2Q96I99 432 aa18.77■□□□□ 0.6
AP000439.3-201ENST00000545202 ZSCAN22P10073 491 aaPredicted RBP18.76■□□□□ 0.59
AP000439.3-201ENST00000545202 SYT1P21579 422 aa18.76■□□□□ 0.59
AP000439.3-201ENST00000545202 ADCK5Q3MIX3 580 aa18.76■□□□□ 0.59
AP000439.3-201ENST00000545202 PRPF40BQ6NWY9 871 aaKnown RBP18.76■□□□□ 0.59
AP000439.3-201ENST00000545202 TSPY26PQ9H489 355 aa18.76■□□□□ 0.59
AP000439.3-201ENST00000545202 NOL7Q9UMY1 257 aaKnown RBP18.76■□□□□ 0.59
AP000439.3-201ENST00000545202 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.76■□□□□ 0.59
AP000439.3-201ENST00000545202 STX6O43752 255 aa18.76■□□□□ 0.59
AP000439.3-201ENST00000545202 LARGE1O95461 756 aa18.76■□□□□ 0.59
AP000439.3-201ENST00000545202 EVI5LQ96CN4 794 aa18.76■□□□□ 0.59
AP000439.3-201ENST00000545202 BICC1Q9H694 974 aaKnown RBP18.76■□□□□ 0.59
AP000439.3-201ENST00000545202 SMC3Q9UQE7 1217 aa18.76■□□□□ 0.59
AP000439.3-201ENST00000545202 CNPY2Q9Y2B0 182 aa18.76■□□□□ 0.59
AP000439.3-201ENST00000545202 SASH1O94885 1247 aa18.75■□□□□ 0.59
AP000439.3-201ENST00000545202 JAKMIP1Q96N16 626 aaKnown RBP18.75■□□□□ 0.59
AP000439.3-201ENST00000545202 DDX21Q9NR30 783 aaKnown RBP eCLIP18.75■□□□□ 0.59
AP000439.3-201ENST00000545202 TMEM87AQ8NBN3 555 aa18.75■□□□□ 0.59
AP000439.3-201ENST00000545202 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.75■□□□□ 0.59
AP000439.3-201ENST00000545202 CAMTA1Q9Y6Y1 1673 aa18.74■□□□□ 0.59
AP000439.3-201ENST00000545202 DDX58O95786 925 aaKnown RBP18.74■□□□□ 0.59
AP000439.3-201ENST00000545202 EAF2Q96CJ1 260 aaPredicted RBP18.74■□□□□ 0.59
AP000439.3-201ENST00000545202 PDRG1Q9NUG6 133 aa18.74■□□□□ 0.59
AP000439.3-201ENST00000545202 ZNF142P52746 1687 aaPredicted RBP18.74■□□□□ 0.59
AP000439.3-201ENST00000545202 UTYO14607 1347 aa18.74■□□□□ 0.59
AP000439.3-201ENST00000545202 G3BP1Q13283 466 aaKnown RBP eCLIP18.74■□□□□ 0.59
AP000439.3-201ENST00000545202 PDIA6Q15084 440 aa18.74■□□□□ 0.59
AP000439.3-201ENST00000545202 VPS53Q5VIR6 699 aa18.74■□□□□ 0.59
AP000439.3-201ENST00000545202 CCDC8Q9H0W5 538 aaPredicted RBP18.74■□□□□ 0.59
AP000439.3-201ENST00000545202 PHF14O94880 888 aa18.73■□□□□ 0.59
AP000439.3-201ENST00000545202 NECTIN1Q15223 517 aa18.73■□□□□ 0.59
AP000439.3-201ENST00000545202 CCDC83Q8IWF9 413 aa18.73■□□□□ 0.59
AP000439.3-201ENST00000545202 ZSWIM6Q9HCJ5 1215 aa18.73■□□□□ 0.59
AP000439.3-201ENST00000545202 CCDC171Q6TFL3 1326 aa18.73■□□□□ 0.59
AP000439.3-201ENST00000545202 DTNBO60941 627 aa18.73■□□□□ 0.59
AP000439.3-201ENST00000545202 OFD1O75665 1012 aa18.73■□□□□ 0.59
AP000439.3-201ENST00000545202 F13A1P00488 732 aa18.73■□□□□ 0.59
AP000439.3-201ENST00000545202 KCNB2Q92953 911 aa18.73■□□□□ 0.59
AP000439.3-201ENST00000545202 CYP46A1Q9Y6A2 500 aa18.73■□□□□ 0.59
AP000439.3-201ENST00000545202 SLC39A6Q13433 755 aa18.72■□□□□ 0.59
AP000439.3-201ENST00000545202 TPRNQ4KMQ1 711 aa18.72■□□□□ 0.59
AP000439.3-201ENST00000545202 DDX54Q8TDD1 881 aaKnown RBP18.72■□□□□ 0.59
AP000439.3-201ENST00000545202 FAM227BQ96M60 508 aa18.72■□□□□ 0.59
AP000439.3-201ENST00000545202 TM6SF1Q9BZW5 370 aa18.72■□□□□ 0.59
AP000439.3-201ENST00000545202 ADAMTS7Q9UKP4 1686 aa18.72■□□□□ 0.59
AP000439.3-201ENST00000545202 IGKV5-2P06315 115 aa18.71■□□□□ 0.59
AP000439.3-201ENST00000545202 GJB2P29033 226 aa18.71■□□□□ 0.59
AP000439.3-201ENST00000545202 RIC3Q7Z5B4 369 aa18.71■□□□□ 0.59
AP000439.3-201ENST00000545202 SIL1Q9H173 461 aa18.71■□□□□ 0.59
AP000439.3-201ENST00000545202 KRT28Q7Z3Y7 464 aa18.71■□□□□ 0.59
AP000439.3-201ENST00000545202 TRPM3Q9HCF6 1732 aaPredicted RBP18.71■□□□□ 0.59
AP000439.3-201ENST00000545202 TLR7Q9NYK1 1049 aaKnown RBP18.71■□□□□ 0.59
AP000439.3-201ENST00000545202 RBM8AQ9Y5S9 174 aaKnown RBP18.71■□□□□ 0.59
AP000439.3-201ENST00000545202 ZKSCAN1P17029 563 aaPredicted RBP18.7■□□□□ 0.58
AP000439.3-201ENST00000545202 NMIQ13287 307 aaPredicted RBP18.7■□□□□ 0.58
AP000439.3-201ENST00000545202 ZNF790Q6PG37 636 aa18.7■□□□□ 0.58
AP000439.3-201ENST00000545202 ZKSCAN5Q9Y2L8 839 aa18.7■□□□□ 0.58
AP000439.3-201ENST00000545202 ZNF500O60304 480 aaPredicted RBP18.7■□□□□ 0.58
AP000439.3-201ENST00000545202 MYL6BP14649 208 aa18.7■□□□□ 0.58
AP000439.3-201ENST00000545202 KCNJ4P48050 445 aa18.7■□□□□ 0.58
AP000439.3-201ENST00000545202 CREB3L3Q68CJ9 461 aa18.7■□□□□ 0.58
AP000439.3-201ENST00000545202 ZSCAN31Q96LW9 406 aaPredicted RBP18.7■□□□□ 0.58
AP000439.3-201ENST00000545202 C5P01031 1676 aa18.7■□□□□ 0.58
AP000439.3-201ENST00000545202 ERBB3P21860 1342 aa18.7■□□□□ 0.58
AP000439.3-201ENST00000545202 ZC3H6P61129 1189 aaKnown RBP18.69■□□□□ 0.58
AP000439.3-201ENST00000545202 KLHDC4Q8TBB5 520 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms