RNA–Protein interactions for RNA: ENST00000545046.5

CHFR-224, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,186 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-224ENST00000545046 NUTM1Q86Y26 1132 aa20.4■□□□□ 0.86
CHFR-224ENST00000545046 ERC1Q8IUD2 1116 aa20.4■□□□□ 0.86
CHFR-224ENST00000545046 SNX21Q969T3 373 aa20.4■□□□□ 0.86
CHFR-224ENST00000545046 PHLPP1O60346 1717 aa20.4■□□□□ 0.86
CHFR-224ENST00000545046 REC8O95072 547 aa20.39■□□□□ 0.86
CHFR-224ENST00000545046 USP26Q9BXU7 913 aa20.39■□□□□ 0.86
CHFR-224ENST00000545046 ERC2O15083 957 aa20.39■□□□□ 0.85
CHFR-224ENST00000545046 RILPL2Q969X0 211 aa20.39■□□□□ 0.85
CHFR-224ENST00000545046 SLKQ9H2G2 1235 aaPredicted RBP20.39■□□□□ 0.85
CHFR-224ENST00000545046 TNS2Q63HR2 1409 aa20.39■□□□□ 0.85
CHFR-224ENST00000545046 AK9Q5TCS8 1911 aa20.38■□□□□ 0.85
CHFR-224ENST00000545046 KAZALD1Q96I82 304 aa20.38■□□□□ 0.85
CHFR-224ENST00000545046 KIF2CQ99661 725 aa20.38■□□□□ 0.85
CHFR-224ENST00000545046 NBPF26B4DH59 902 aa20.38■□□□□ 0.85
CHFR-224ENST00000545046 NBPF14Q5TI25 921 aa20.38■□□□□ 0.85
CHFR-224ENST00000545046 NBPF10Q6P3W6 841 aaKnown RBP20.38■□□□□ 0.85
CHFR-224ENST00000545046 AEBP2Q6ZN18 517 aaPredicted RBP20.38■□□□□ 0.85
CHFR-224ENST00000545046 NBPF15Q8N660 670 aa20.38■□□□□ 0.85
CHFR-224ENST00000545046 ITGB4P16144 1822 aa20.37■□□□□ 0.85
CHFR-224ENST00000545046 PLCH1Q4KWH8 1693 aa20.37■□□□□ 0.85
CHFR-224ENST00000545046 DISP2A7MBM2 1401 aa20.37■□□□□ 0.85
CHFR-224ENST00000545046 CLASRPQ8N2M8 674 aaKnown RBP20.37■□□□□ 0.85
CHFR-224ENST00000545046 NFKBIBQ15653 356 aa20.36■□□□□ 0.85
CHFR-224ENST00000545046 G3BP1Q13283 466 aaKnown RBP eCLIP20.36■□□□□ 0.85
CHFR-224ENST00000545046 PA2G4Q9UQ80 394 aaKnown RBP20.36■□□□□ 0.85
CHFR-224ENST00000545046 EXOC5O00471 708 aa20.35■□□□□ 0.85
CHFR-224ENST00000545046 A1BGP04217 495 aa20.35■□□□□ 0.85
CHFR-224ENST00000545046 TEX13AQ9BXU3 409 aaPredicted RBP20.35■□□□□ 0.85
CHFR-224ENST00000545046 WNK3Q9BYP7 1800 aa20.35■□□□□ 0.85
CHFR-224ENST00000545046 ATP5J2-PTCD1G3V325 749 aa20.34■□□□□ 0.85
CHFR-224ENST00000545046 SPRYD3Q8NCJ5 442 aa20.34■□□□□ 0.85
CHFR-224ENST00000545046 ANTXR1Q9H6X2 564 aa20.34■□□□□ 0.85
CHFR-224ENST00000545046 PIGBQ92521 554 aa20.34■□□□□ 0.85
CHFR-224ENST00000545046 TTC41PQ6P2S7 1318 aa20.34■□□□□ 0.85
CHFR-224ENST00000545046 NUP188Q5SRE5 1749 aa20.33■□□□□ 0.85
CHFR-224ENST00000545046 KAT6BQ8WYB5 2073 aa20.33■□□□□ 0.85
CHFR-224ENST00000545046 A0A087WZG4 1122 aa20.33■□□□□ 0.85
CHFR-224ENST00000545046 CHMLP26374 656 aa20.33■□□□□ 0.85
CHFR-224ENST00000545046 VSIG10Q8N0Z9 540 aa20.33■□□□□ 0.85
CHFR-224ENST00000545046 PI4K2BQ8TCG2 481 aa20.33■□□□□ 0.85
CHFR-224ENST00000545046 GPATCH3Q96I76 525 aa20.33■□□□□ 0.85
CHFR-224ENST00000545046 ESYT1Q9BSJ8 1104 aa20.33■□□□□ 0.85
CHFR-224ENST00000545046 USP42Q9H9J4 1324 aaKnown RBP20.33■□□□□ 0.85
CHFR-224ENST00000545046 RABEP1Q15276 862 aa20.32■□□□□ 0.84
CHFR-224ENST00000545046 TTLL7Q6ZT98 887 aa20.32■□□□□ 0.84
CHFR-224ENST00000545046 UBE3BQ7Z3V4 1068 aa20.32■□□□□ 0.84
CHFR-224ENST00000545046 COL15A1P39059 1388 aa20.32■□□□□ 0.84
CHFR-224ENST00000545046 ADAMTS2O95450 1211 aa20.32■□□□□ 0.84
CHFR-224ENST00000545046 IFIT2P09913 472 aaKnown RBP20.32■□□□□ 0.84
CHFR-224ENST00000545046 ASAP1Q9ULH1 1129 aa20.32■□□□□ 0.84
CHFR-224ENST00000545046 UNC5CLQ8IV45 518 aa20.31■□□□□ 0.84
CHFR-224ENST00000545046 CDCA7Q9BWT1 371 aaPredicted RBP20.31■□□□□ 0.84
CHFR-224ENST00000545046 TOM1O60784 492 aa20.31■□□□□ 0.84
CHFR-224ENST00000545046 GLRX3O76003 335 aaKnown RBP20.31■□□□□ 0.84
CHFR-224ENST00000545046 EPHA10Q5JZY3 1008 aa20.31■□□□□ 0.84
CHFR-224ENST00000545046 CNTROBQ8N137 903 aa20.31■□□□□ 0.84
CHFR-224ENST00000545046 ATG3Q9NT62 314 aa20.31■□□□□ 0.84
CHFR-224ENST00000545046 LRP6O75581 1613 aa20.3■□□□□ 0.84
CHFR-224ENST00000545046 JARID2Q92833 1246 aaPredicted RBP20.3■□□□□ 0.84
CHFR-224ENST00000545046 RBM42Q9BTD8 480 aaKnown RBP20.3■□□□□ 0.84
CHFR-224ENST00000545046 CWC25Q9NXE8 425 aaPredicted RBP20.29■□□□□ 0.84
CHFR-224ENST00000545046 SASH1O94885 1247 aa20.29■□□□□ 0.84
CHFR-224ENST00000545046 AACSQ86V21 672 aa20.29■□□□□ 0.84
CHFR-224ENST00000545046 SIL1Q9H173 461 aa20.29■□□□□ 0.84
CHFR-224ENST00000545046 ECHDC1Q9NTX5 307 aa20.29■□□□□ 0.84
CHFR-224ENST00000545046 STARD3NLO95772 234 aa20.28■□□□□ 0.84
CHFR-224ENST00000545046 MAP4K4O95819 1239 aaPredicted RBP20.28■□□□□ 0.84
CHFR-224ENST00000545046 ZBTB3Q9H5J0 574 aa20.28■□□□□ 0.84
CHFR-224ENST00000545046 THRAP3Q9Y2W1 955 aaKnown RBP20.28■□□□□ 0.84
CHFR-224ENST00000545046 NRAPQ86VF7 1730 aa20.28■□□□□ 0.84
CHFR-224ENST00000545046 H7C1W4 665 aa20.28■□□□□ 0.84
CHFR-224ENST00000545046 MCCP23508 829 aa20.28■□□□□ 0.84
CHFR-224ENST00000545046 PIP4K2BP78356 416 aa20.28■□□□□ 0.84
CHFR-224ENST00000545046 RABL6Q3YEC7 729 aaPredicted RBP20.28■□□□□ 0.84
CHFR-224ENST00000545046 DNAJC10Q8IXB1 793 aa20.28■□□□□ 0.84
CHFR-224ENST00000545046 CHMP5Q9NZZ3 219 aa20.28■□□□□ 0.84
CHFR-224ENST00000545046 BCL9O00512 1426 aa20.27■□□□□ 0.84
CHFR-224ENST00000545046 K7ELQ4 463 aaPredicted RBP20.27■□□□□ 0.84
CHFR-224ENST00000545046 CASP7P55210 303 aa20.27■□□□□ 0.84
CHFR-224ENST00000545046 CCDC191Q8NCU4 936 aa20.27■□□□□ 0.84
CHFR-224ENST00000545046 COPRSQ9NQ92 184 aa20.27■□□□□ 0.84
CHFR-224ENST00000545046 SPATA31A1Q5TZJ5 1347 aa20.26■□□□□ 0.83
CHFR-224ENST00000545046 NUTM2BA6NNL0 878 aaPredicted RBP20.26■□□□□ 0.83
CHFR-224ENST00000545046 NUTM2EB1AL46 878 aaPredicted RBP20.26■□□□□ 0.83
CHFR-224ENST00000545046 NUTM2AQ8IVF1 878 aaPredicted RBP20.26■□□□□ 0.83
CHFR-224ENST00000545046 FRAT2O75474 233 aaPredicted RBP20.25■□□□□ 0.83
CHFR-224ENST00000545046 HSP90AA1P07900 732 aaKnown RBP20.25■□□□□ 0.83
CHFR-224ENST00000545046 KLHDC4Q8TBB5 520 aa20.25■□□□□ 0.83
CHFR-224ENST00000545046 SYTL4Q96C24 671 aaPredicted RBP20.25■□□□□ 0.83
CHFR-224ENST00000545046 ANO2Q9NQ90 1003 aa20.25■□□□□ 0.83
CHFR-224ENST00000545046 CD2BP2O95400 341 aaKnown RBP20.25■□□□□ 0.83
CHFR-224ENST00000545046 KIF6Q6ZMV9 814 aa20.25■□□□□ 0.83
CHFR-224ENST00000545046 ZNF330Q9Y3S2 320 aaPredicted RBP20.25■□□□□ 0.83
CHFR-224ENST00000545046 RFX5P48382 616 aaPredicted RBP20.24■□□□□ 0.83
CHFR-224ENST00000545046 EAF2Q96CJ1 260 aaPredicted RBP20.24■□□□□ 0.83
CHFR-224ENST00000545046 TJP1Q07157 1748 aa20.24■□□□□ 0.83
CHFR-224ENST00000545046 EPB41L2O43491 1005 aaKnown RBP20.24■□□□□ 0.83
CHFR-224ENST00000545046 PTPN12Q05209 780 aaKnown RBP20.24■□□□□ 0.83
CHFR-224ENST00000545046 DDB1Q16531 1140 aa20.24■□□□□ 0.83
CHFR-224ENST00000545046 ST18O60284 1047 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms