RNA–Protein interactions for RNA: ENST00000544872.1

CIT-216, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-216ENST00000544872 BTBD11A6QL63 1104 aa12.41□□□□□ -0.42
CIT-216ENST00000544872 TMPOP42166 694 aaKnown RBP12.41□□□□□ -0.42
CIT-216ENST00000544872 TAF7Q15545 349 aaPredicted RBP12.41□□□□□ -0.42
CIT-216ENST00000544872 MAP1SQ66K74 1059 aaPredicted RBP12.41□□□□□ -0.42
CIT-216ENST00000544872 TAF1DQ9H5J8 278 aaPredicted RBP12.41□□□□□ -0.42
CIT-216ENST00000544872 LGR6Q9HBX8 967 aa12.41□□□□□ -0.42
CIT-216ENST00000544872 C4AP0C0L4 1744 aa12.4□□□□□ -0.42
CIT-216ENST00000544872 LTBP1Q14766 1721 aa12.4□□□□□ -0.42
CIT-216ENST00000544872 ATP6V1AP38606 617 aa12.4□□□□□ -0.42
CIT-216ENST00000544872 TEX13AQ9BXU3 409 aaPredicted RBP12.4□□□□□ -0.42
CIT-216ENST00000544872 RTCBQ9Y3I0 505 aaKnown RBP12.4□□□□□ -0.42
CIT-216ENST00000544872 LOC102724428A0A0B4J2F2 783 aa12.39□□□□□ -0.43
CIT-216ENST00000544872 APAF1O14727 1248 aa12.39□□□□□ -0.43
CIT-216ENST00000544872 PTCD1O75127 700 aaKnown RBP12.39□□□□□ -0.43
CIT-216ENST00000544872 RFC4P35249 363 aa12.39□□□□□ -0.43
CIT-216ENST00000544872 SIK1P57059 783 aa12.39□□□□□ -0.43
CIT-216ENST00000544872 MCM10Q7L590 875 aa12.39□□□□□ -0.43
CIT-216ENST00000544872 IL17REQ8NFR9 667 aa12.39□□□□□ -0.43
CIT-216ENST00000544872 CHMP4AQ9BY43 222 aa12.39□□□□□ -0.43
CIT-216ENST00000544872 ATG3Q9NT62 314 aa12.39□□□□□ -0.43
CIT-216ENST00000544872 ASAP1Q9ULH1 1129 aa12.39□□□□□ -0.43
CIT-216ENST00000544872 CCDC88AQ3V6T2 1871 aa12.39□□□□□ -0.43
CIT-216ENST00000544872 STARD3NLO95772 234 aa12.38□□□□□ -0.43
CIT-216ENST00000544872 FMNL2Q96PY5 1086 aa12.38□□□□□ -0.43
CIT-216ENST00000544872 BABAM1Q9NWV8 329 aa12.38□□□□□ -0.43
CIT-216ENST00000544872 THSD7BQ9C0I4 1608 aa12.37□□□□□ -0.43
CIT-216ENST00000544872 NFKBIEO00221 500 aa12.37□□□□□ -0.43
CIT-216ENST00000544872 GYS1P13807 737 aa12.37□□□□□ -0.43
CIT-216ENST00000544872 ZNF790Q6PG37 636 aa12.37□□□□□ -0.43
CIT-216ENST00000544872 MPNDQ8N594 471 aa12.37□□□□□ -0.43
CIT-216ENST00000544872 DDX21Q9NR30 783 aaKnown RBP eCLIP12.37□□□□□ -0.43
CIT-216ENST00000544872 RRP7AQ9Y3A4 280 aaKnown RBP12.37□□□□□ -0.43
CIT-216ENST00000544872 LAS1LQ9Y4W2 734 aaKnown RBP12.37□□□□□ -0.43
CIT-216ENST00000544872 BRPF1P55201 1214 aaPredicted RBP12.36□□□□□ -0.43
CIT-216ENST00000544872 DCTN1Q14203 1278 aa12.36□□□□□ -0.43
CIT-216ENST00000544872 NCBP3Q53F19 620 aaKnown RBP12.36□□□□□ -0.43
CIT-216ENST00000544872 VSIG10Q8N0Z9 540 aa12.36□□□□□ -0.43
CIT-216ENST00000544872 TTLL6Q8N841 843 aa12.36□□□□□ -0.43
CIT-216ENST00000544872 TSPYL4Q9UJ04 414 aa12.36□□□□□ -0.43
CIT-216ENST00000544872 MNX1P50219 401 aaPredicted RBP12.35□□□□□ -0.43
CIT-216ENST00000544872 CCDC184Q52MB2 194 aa12.35□□□□□ -0.43
CIT-216ENST00000544872 CIAPIN1Q6FI81 312 aa12.35□□□□□ -0.43
CIT-216ENST00000544872 MIER1Q8N108 512 aa12.35□□□□□ -0.43
CIT-216ENST00000544872 ARHGEF1Q92888 912 aaKnown RBP12.35□□□□□ -0.43
CIT-216ENST00000544872 HACL1Q9UJ83 578 aa12.35□□□□□ -0.43
CIT-216ENST00000544872 SNRPA1P09661 255 aaKnown RBP12.34□□□□□ -0.43
CIT-216ENST00000544872 GNAI1P63096 354 aa12.34□□□□□ -0.43
CIT-216ENST00000544872 SLC39A6Q13433 755 aa12.34□□□□□ -0.43
CIT-216ENST00000544872 PNMA8AQ86V59 439 aaPredicted RBP12.34□□□□□ -0.43
CIT-216ENST00000544872 CEMIPQ8WUJ3 1361 aa12.33□□□□□ -0.44
CIT-216ENST00000544872 EPHX2P34913 555 aa12.33□□□□□ -0.44
CIT-216ENST00000544872 CCDC27Q2M243 656 aa12.33□□□□□ -0.44
CIT-216ENST00000544872 HPS5Q9UPZ3 1129 aa12.33□□□□□ -0.44
CIT-216ENST00000544872 COLQQ9Y215 455 aaPredicted RBP12.33□□□□□ -0.44
CIT-216ENST00000544872 ADAMTS7Q9UKP4 1686 aa12.32□□□□□ -0.44
CIT-216ENST00000544872 ADRA2BP18089 450 aa12.32□□□□□ -0.44
CIT-216ENST00000544872 ITPK1Q13572 414 aa12.32□□□□□ -0.44
CIT-216ENST00000544872 RC3H1Q5TC82 1133 aaKnown RBP12.32□□□□□ -0.44
CIT-216ENST00000544872 CTU1Q7Z7A3 348 aaKnown RBP12.32□□□□□ -0.44
CIT-216ENST00000544872 L3MBTL3Q96JM7 780 aaPredicted RBP12.32□□□□□ -0.44
CIT-216ENST00000544872 TRIOBPQ9H2D6 2365 aa12.32□□□□□ -0.44
CIT-216ENST00000544872 SALL2Q9Y467 1007 aaPredicted RBP12.31□□□□□ -0.44
CIT-216ENST00000544872 TLL2Q9Y6L7 1015 aa12.31□□□□□ -0.44
CIT-216ENST00000544872 A0A0C4DFX4 3053 aa12.31□□□□□ -0.44
CIT-216ENST00000544872 RGPD2P0DJD1 1756 aa12.3□□□□□ -0.44
CIT-216ENST00000544872 A0A087WZG4 1122 aa12.3□□□□□ -0.44
CIT-216ENST00000544872 FMR1Q06787 632 aaKnown RBP eCLIP12.3□□□□□ -0.44
CIT-216ENST00000544872 DDR1Q08345 913 aa12.3□□□□□ -0.44
CIT-216ENST00000544872 WDR63Q8IWG1 891 aa12.3□□□□□ -0.44
CIT-216ENST00000544872 ZNF496Q96IT1 587 aaPredicted RBP12.3□□□□□ -0.44
CIT-216ENST00000544872 THUMPD2Q9BTF0 503 aaKnown RBP12.3□□□□□ -0.44
CIT-216ENST00000544872 MYH16Q9H6N6 1097 aa12.3□□□□□ -0.44
CIT-216ENST00000544872 IFT57Q9NWB7 429 aa12.3□□□□□ -0.44
CIT-216ENST00000544872 MIS18AQ9NYP9 233 aa12.3□□□□□ -0.44
CIT-216ENST00000544872 TAOK3Q9H2K8 898 aa12.29□□□□□ -0.44
CIT-216ENST00000544872 TRIM35Q9UPQ4 493 aa12.29□□□□□ -0.44
CIT-216ENST00000544872 SCN4AP35499 1836 aa12.29□□□□□ -0.44
CIT-216ENST00000544872 C21orf2O43822 256 aa12.28□□□□□ -0.44
CIT-216ENST00000544872 ZPR1O75312 459 aa12.28□□□□□ -0.44
CIT-216ENST00000544872 RPS6KA4O75676 772 aa12.28□□□□□ -0.44
CIT-216ENST00000544872 C2CD5Q86YS7 1000 aa12.28□□□□□ -0.44
CIT-216ENST00000544872 WWC1Q8IX03 1113 aa12.28□□□□□ -0.44
CIT-216ENST00000544872 DNAJC10Q8IXB1 793 aa12.28□□□□□ -0.44
CIT-216ENST00000544872 HEG1Q9ULI3 1381 aa12.28□□□□□ -0.44
CIT-216ENST00000544872 CHL1O00533 1208 aa12.27□□□□□ -0.45
CIT-216ENST00000544872 CRKLP46109 303 aaKnown RBP12.27□□□□□ -0.45
CIT-216ENST00000544872 GOLGA2Q08379 1002 aa12.27□□□□□ -0.45
CIT-216ENST00000544872 FKBP8Q14318 412 aa12.27□□□□□ -0.45
CIT-216ENST00000544872 BICDL1Q6ZP65 573 aa12.27□□□□□ -0.45
CIT-216ENST00000544872 ZNF330Q9Y3S2 320 aaPredicted RBP12.27□□□□□ -0.45
CIT-216ENST00000544872 IL16Q14005 1332 aa12.27□□□□□ -0.45
CIT-216ENST00000544872 CNTNAP4Q9C0A0 1308 aa12.27□□□□□ -0.45
CIT-216ENST00000544872 H0YIN7 160 aa12.26□□□□□ -0.45
CIT-216ENST00000544872 CYP19A1P11511 503 aaPredicted RBP12.26□□□□□ -0.45
CIT-216ENST00000544872 CANXP27824 592 aaKnown RBP12.26□□□□□ -0.45
CIT-216ENST00000544872 EIF4A1P60842 406 aaKnown RBP12.26□□□□□ -0.45
CIT-216ENST00000544872 CST9Q5W186 159 aa12.26□□□□□ -0.45
CIT-216ENST00000544872 SRP68Q9UHB9 627 aaKnown RBP12.26□□□□□ -0.45
CIT-216ENST00000544872 RNF123Q5XPI4 1314 aa12.26□□□□□ -0.45
CIT-216ENST00000544872 POLRMTO00411 1230 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms