RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 RNF20Q5VTR2 975 aa15.68■□□□□ 0.1
CPSF7-223ENST00000544669 UNC5CLQ8IV45 518 aa15.68■□□□□ 0.1
CPSF7-223ENST00000544669 KCNB2Q92953 911 aa15.68■□□□□ 0.1
CPSF7-223ENST00000544669 SPG7Q9UQ90 795 aa15.68■□□□□ 0.1
CPSF7-223ENST00000544669 GRM8O00222 908 aa15.68■□□□□ 0.1
CPSF7-223ENST00000544669 ANKRD1Q15327 319 aa15.68■□□□□ 0.1
CPSF7-223ENST00000544669 GPT2Q8TD30 523 aa15.68■□□□□ 0.1
CPSF7-223ENST00000544669 SNX14Q9Y5W7 946 aa15.68■□□□□ 0.1
CPSF7-223ENST00000544669 UVSSAQ2YD98 709 aa15.67■□□□□ 0.1
CPSF7-223ENST00000544669 RAPGEF4Q8WZA2 1011 aa15.67■□□□□ 0.1
CPSF7-223ENST00000544669 TTC14Q96N46 770 aa15.67■□□□□ 0.1
CPSF7-223ENST00000544669 ABCC6O95255 1503 aa15.67■□□□□ 0.1
CPSF7-223ENST00000544669 TERF1P54274 439 aa15.66■□□□□ 0.1
CPSF7-223ENST00000544669 PDLIM2Q96JY6 352 aa15.66■□□□□ 0.1
CPSF7-223ENST00000544669 ANO8Q9HCE9 1232 aaPredicted RBP15.66■□□□□ 0.1
CPSF7-223ENST00000544669 SMC3Q9UQE7 1217 aa15.66■□□□□ 0.1
CPSF7-223ENST00000544669 CYP46A1Q9Y6A2 500 aa15.66■□□□□ 0.1
CPSF7-223ENST00000544669 KIF1AQ12756 1690 aa15.66■□□□□ 0.1
CPSF7-223ENST00000544669 ZBTB7CA1YPR0 619 aa15.66■□□□□ 0.1
CPSF7-223ENST00000544669 KRT28Q7Z3Y7 464 aa15.66■□□□□ 0.1
CPSF7-223ENST00000544669 UPF3BQ9BZI7 483 aaKnown RBP15.66■□□□□ 0.1
CPSF7-223ENST00000544669 SNRKQ9NRH2 765 aa15.66■□□□□ 0.1
CPSF7-223ENST00000544669 CAMTA1Q9Y6Y1 1673 aa15.66■□□□□ 0.1
CPSF7-223ENST00000544669 ZSCAN22P10073 491 aaPredicted RBP15.65■□□□□ 0.1
CPSF7-223ENST00000544669 PRIM1P49642 420 aaKnown RBP15.65■□□□□ 0.1
CPSF7-223ENST00000544669 CWC27Q6UX04 472 aaKnown RBP15.65■□□□□ 0.1
CPSF7-223ENST00000544669 TSPY26PQ9H489 355 aa15.65■□□□□ 0.1
CPSF7-223ENST00000544669 C19orf44Q9H6X5 657 aa15.65■□□□□ 0.1
CPSF7-223ENST00000544669 CCDC39Q9UFE4 941 aa15.65■□□□□ 0.1
CPSF7-223ENST00000544669 TATP17735 454 aaPredicted RBP15.64■□□□□ 0.09
CPSF7-223ENST00000544669 PDCP20941 246 aa15.64■□□□□ 0.09
CPSF7-223ENST00000544669 RIC3Q7Z5B4 369 aa15.64■□□□□ 0.09
CPSF7-223ENST00000544669 LRRC59Q96AG4 307 aaKnown RBP15.64■□□□□ 0.09
CPSF7-223ENST00000544669 NAP1L5Q96NT1 182 aaPredicted RBP15.64■□□□□ 0.09
CPSF7-223ENST00000544669 ALDH8A1Q9H2A2 487 aaPredicted RBP15.64■□□□□ 0.09
CPSF7-223ENST00000544669 ZSWIM6Q9HCJ5 1215 aa15.64■□□□□ 0.09
CPSF7-223ENST00000544669 KCNQ3O43525 872 aa15.64■□□□□ 0.09
CPSF7-223ENST00000544669 TPM2P07951 284 aa15.64■□□□□ 0.09
CPSF7-223ENST00000544669 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.64■□□□□ 0.09
CPSF7-223ENST00000544669 PDRG1Q9NUG6 133 aa15.64■□□□□ 0.09
CPSF7-223ENST00000544669 HMG20BQ9P0W2 317 aa15.64■□□□□ 0.09
CPSF7-223ENST00000544669 SETD1BQ9UPS6 1966 aaKnown RBP15.63■□□□□ 0.09
CPSF7-223ENST00000544669 COL15A1P39059 1388 aa15.63■□□□□ 0.09
CPSF7-223ENST00000544669 STX6O43752 255 aa15.63■□□□□ 0.09
CPSF7-223ENST00000544669 UBE2HP62256 183 aa15.63■□□□□ 0.09
CPSF7-223ENST00000544669 AACSQ86V21 672 aa15.63■□□□□ 0.09
CPSF7-223ENST00000544669 RBSNQ9H1K0 784 aa15.63■□□□□ 0.09
CPSF7-223ENST00000544669 TMEM63CQ9P1W3 806 aa15.63■□□□□ 0.09
CPSF7-223ENST00000544669 NOL7Q9UMY1 257 aaKnown RBP15.63■□□□□ 0.09
CPSF7-223ENST00000544669 CRYBG1Q9Y4K1 1723 aa15.63■□□□□ 0.09
CPSF7-223ENST00000544669 AK2P54819 239 aa15.62■□□□□ 0.09
CPSF7-223ENST00000544669 KRT32Q14532 448 aa15.62■□□□□ 0.09
CPSF7-223ENST00000544669 ZNF790Q6PG37 636 aa15.62■□□□□ 0.09
CPSF7-223ENST00000544669 CHMP4CQ96CF2 233 aa15.62■□□□□ 0.09
CPSF7-223ENST00000544669 SLC52A2Q9HAB3 445 aa15.62■□□□□ 0.09
CPSF7-223ENST00000544669 RFX7Q2KHR2 1363 aa15.62■□□□□ 0.09
CPSF7-223ENST00000544669 ADAMTS7Q9UKP4 1686 aa15.62■□□□□ 0.09
CPSF7-223ENST00000544669 ERBB3P21860 1342 aa15.62■□□□□ 0.09
CPSF7-223ENST00000544669 KCNJ4P48050 445 aa15.61■□□□□ 0.09
CPSF7-223ENST00000544669 CCDC183Q5T5S1 534 aa15.61■□□□□ 0.09
CPSF7-223ENST00000544669 RUFY3Q7L099 469 aa15.61■□□□□ 0.09
CPSF7-223ENST00000544669 IFNL2Q8IZJ0 200 aa15.61■□□□□ 0.09
CPSF7-223ENST00000544669 CCDC171Q6TFL3 1326 aa15.61■□□□□ 0.09
CPSF7-223ENST00000544669 SYCE3A1L190 88 aa15.61■□□□□ 0.09
CPSF7-223ENST00000544669 CASTP20810 708 aaKnown RBP15.61■□□□□ 0.09
CPSF7-223ENST00000544669 LMOD2Q6P5Q4 547 aa15.61■□□□□ 0.09
CPSF7-223ENST00000544669 PROSER2Q86WR7 435 aaPredicted RBP15.61■□□□□ 0.09
CPSF7-223ENST00000544669 MAP4K1Q92918 833 aa15.61■□□□□ 0.09
CPSF7-223ENST00000544669 METTL22Q9BUU2 404 aaPredicted RBP15.61■□□□□ 0.09
CPSF7-223ENST00000544669 ZNF500O60304 480 aaPredicted RBP15.6■□□□□ 0.09
CPSF7-223ENST00000544669 SNRPA1P09661 255 aaKnown RBP15.6■□□□□ 0.09
CPSF7-223ENST00000544669 TRHP20396 242 aaPredicted RBP15.6■□□□□ 0.09
CPSF7-223ENST00000544669 NECTIN1Q15223 517 aa15.6■□□□□ 0.09
CPSF7-223ENST00000544669 DCAF5Q96JK2 942 aa15.6■□□□□ 0.09
CPSF7-223ENST00000544669 ORAI2Q96SN7 254 aa15.6■□□□□ 0.09
CPSF7-223ENST00000544669 ERBB4Q15303 1308 aa15.6■□□□□ 0.09
CPSF7-223ENST00000544669 NPHP3Q7Z494 1330 aa15.6■□□□□ 0.09
CPSF7-223ENST00000544669 MAP4K4O95819 1239 aaPredicted RBP15.59■□□□□ 0.09
CPSF7-223ENST00000544669 TSGA10IPQ3SY00 556 aa15.59■□□□□ 0.09
CPSF7-223ENST00000544669 USP48Q86UV5 1035 aa15.59■□□□□ 0.09
CPSF7-223ENST00000544669 TTC5Q8N0Z6 440 aa15.59■□□□□ 0.09
CPSF7-223ENST00000544669 AK9Q5TCS8 1911 aa15.59■□□□□ 0.09
CPSF7-223ENST00000544669 C1orf167Q5SNV9 1468 aa15.59■□□□□ 0.09
CPSF7-223ENST00000544669 F13A1P00488 732 aa15.59■□□□□ 0.09
CPSF7-223ENST00000544669 SYT1P21579 422 aa15.59■□□□□ 0.09
CPSF7-223ENST00000544669 NOL8Q76FK4 1167 aaKnown RBP15.59■□□□□ 0.09
CPSF7-223ENST00000544669 JAKMIP1Q96N16 626 aaKnown RBP15.59■□□□□ 0.09
CPSF7-223ENST00000544669 COPRSQ9NQ92 184 aa15.59■□□□□ 0.09
CPSF7-223ENST00000544669 DCCP43146 1447 aa15.58■□□□□ 0.09
CPSF7-223ENST00000544669 OFD1O75665 1012 aa15.58■□□□□ 0.08
CPSF7-223ENST00000544669 GCKRQ14397 625 aa15.58■□□□□ 0.08
CPSF7-223ENST00000544669 CWF19L2Q2TBE0 894 aaKnown RBP15.58■□□□□ 0.08
CPSF7-223ENST00000544669 RASEFQ8IZ41 740 aa15.58■□□□□ 0.08
CPSF7-223ENST00000544669 SUCLG2Q96I99 432 aa15.58■□□□□ 0.08
CPSF7-223ENST00000544669 BICC1Q9H694 974 aaKnown RBP15.58■□□□□ 0.08
CPSF7-223ENST00000544669 RPAP1Q9BWH6 1393 aaPredicted RBP15.57■□□□□ 0.08
CPSF7-223ENST00000544669 NEURL1BA8MQ27 555 aa15.57■□□□□ 0.08
CPSF7-223ENST00000544669 ANXA1P04083 346 aa15.57■□□□□ 0.08
CPSF7-223ENST00000544669 PHKG2P15735 406 aa15.57■□□□□ 0.08
CPSF7-223ENST00000544669 PDIA6Q15084 440 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms