RNA–Protein interactions for RNA: ENST00000544336.5

PDCD2-211, Transcript of programmed cell death 2, humanhuman

TSL 1 (best)

Gene PDCD2, Length 1,164 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-211ENST00000544336 FER1L6Q2WGJ9 1857 aa36.52■■■■□ 3.44
PDCD2-211ENST00000544336 GLTPD2A6NH11 291 aa36.51■■■■□ 3.44
PDCD2-211ENST00000544336 TAF7Q15545 349 aaPredicted RBP36.51■■■■□ 3.44
PDCD2-211ENST00000544336 DNAJC5GQ8N7S2 189 aa36.51■■■■□ 3.44
PDCD2-211ENST00000544336 SLX4Q8IY92 1834 aa36.5■■■■□ 3.43
PDCD2-211ENST00000544336 NBPF26B4DH59 902 aa36.5■■■■□ 3.43
PDCD2-211ENST00000544336 NEFMP07197 916 aa36.5■■■■□ 3.43
PDCD2-211ENST00000544336 NBPF10Q6P3W6 841 aaKnown RBP36.5■■■■□ 3.43
PDCD2-211ENST00000544336 NBPF5PQ86XG9 351 aaPredicted RBP36.5■■■■□ 3.43
PDCD2-211ENST00000544336 NBPF15Q8N660 670 aa36.5■■■■□ 3.43
PDCD2-211ENST00000544336 ZNF652Q9Y2D9 606 aa36.5■■■■□ 3.43
PDCD2-211ENST00000544336 LAMB4A4D0S4 1761 aa36.48■■■■□ 3.43
PDCD2-211ENST00000544336 DICER1Q9UPY3 1922 aaKnown RBP36.47■■■■□ 3.43
PDCD2-211ENST00000544336 IFFO2Q5TF58 517 aa36.47■■■■□ 3.43
PDCD2-211ENST00000544336 CLEC4GQ6UXB4 293 aa36.47■■■■□ 3.43
PDCD2-211ENST00000544336 CNKSR1Q969H4 720 aa36.47■■■■□ 3.43
PDCD2-211ENST00000544336 ARFGEF2Q9Y6D5 1785 aa36.47■■■■□ 3.43
PDCD2-211ENST00000544336 SRGNP10124 158 aa36.46■■■■□ 3.43
PDCD2-211ENST00000544336 STYK1Q6J9G0 422 aa36.46■■■■□ 3.43
PDCD2-211ENST00000544336 SMC1BQ8NDV3 1235 aa36.46■■■■□ 3.43
PDCD2-211ENST00000544336 VEGFAP15692 232 aaPredicted RBP36.45■■■■□ 3.43
PDCD2-211ENST00000544336 PRPF40BQ6NWY9 871 aaKnown RBP36.45■■■■□ 3.43
PDCD2-211ENST00000544336 MASTLQ96GX5 879 aa36.45■■■■□ 3.43
PDCD2-211ENST00000544336 KDM3BQ7LBC6 1761 aa36.45■■■■□ 3.43
PDCD2-211ENST00000544336 FAM177BA6PVY3 158 aa36.44■■■■□ 3.42
PDCD2-211ENST00000544336 ERFEQ4G0M1 354 aa36.44■■■■□ 3.42
PDCD2-211ENST00000544336 NIP7Q9Y221 180 aaKnown RBP eCLIP36.44■■■■□ 3.42
PDCD2-211ENST00000544336 TAOK3Q9H2K8 898 aa36.42■■■■□ 3.42
PDCD2-211ENST00000544336 DPY19L2Q6NUT2 758 aa36.4■■■■□ 3.42
PDCD2-211ENST00000544336 NGEFQ8N5V2 710 aa36.4■■■■□ 3.42
PDCD2-211ENST00000544336 PLEKHF1Q96S99 279 aa36.4■■■■□ 3.42
PDCD2-211ENST00000544336 THUMPD2Q9BTF0 503 aaKnown RBP36.4■■■■□ 3.42
PDCD2-211ENST00000544336 HLFQ16534 295 aa36.39■■■■□ 3.42
PDCD2-211ENST00000544336 NFE2L2Q16236 605 aa36.38■■■■□ 3.41
PDCD2-211ENST00000544336 TPTE2Q6XPS3 522 aa36.38■■■■□ 3.41
PDCD2-211ENST00000544336 PNISRQ8TF01 805 aaKnown RBP36.38■■■■□ 3.41
PDCD2-211ENST00000544336 LTBP3Q9NS15 1303 aa36.37■■■■□ 3.41
PDCD2-211ENST00000544336 KLRG1Q96E93 195 aa36.36■■■■□ 3.41
PDCD2-211ENST00000544336 MAPK8IP3Q9UPT6 1336 aa36.35■■■■□ 3.41
PDCD2-211ENST00000544336 POTECB2RU33 542 aa36.35■■■■□ 3.41
PDCD2-211ENST00000544336 SOGA3Q5TF21 947 aa36.35■■■■□ 3.41
PDCD2-211ENST00000544336 NPR1P16066 1061 aa36.34■■■■□ 3.41
PDCD2-211ENST00000544336 RRP7AQ9Y3A4 280 aaKnown RBP36.34■■■■□ 3.41
PDCD2-211ENST00000544336 EIF4A1P60842 406 aaKnown RBP36.33■■■■□ 3.41
PDCD2-211ENST00000544336 NUP98P52948 1817 aa36.32■■■■□ 3.41
PDCD2-211ENST00000544336 RGL2O15211 777 aa36.32■■■■□ 3.4
PDCD2-211ENST00000544336 GTF2E1P29083 439 aaPredicted RBP36.32■■■■□ 3.4
PDCD2-211ENST00000544336 CCDC93Q567U6 631 aa36.3■■■■□ 3.4
PDCD2-211ENST00000544336 PNNQ9H307 717 aaKnown RBP36.3■■■■□ 3.4
PDCD2-211ENST00000544336 KLRG2A4D1S0 409 aaPredicted RBP36.29■■■■□ 3.4
PDCD2-211ENST00000544336 MYL6BP14649 208 aa36.29■■■■□ 3.4
PDCD2-211ENST00000544336 C7orf43Q8WVR3 580 aa36.29■■■■□ 3.4
PDCD2-211ENST00000544336 DDNO94850 711 aaPredicted RBP36.28■■■■□ 3.4
PDCD2-211ENST00000544336 OLFM4Q6UX06 510 aa36.28■■■■□ 3.4
PDCD2-211ENST00000544336 TTLL7Q6ZT98 887 aa36.28■■■■□ 3.4
PDCD2-211ENST00000544336 KIF6Q6ZMV9 814 aa36.27■■■■□ 3.4
PDCD2-211ENST00000544336 MAP3K15Q6ZN16 1313 aa36.26■■■■□ 3.39
PDCD2-211ENST00000544336 NUTM1Q86Y26 1132 aa36.25■■■■□ 3.39
PDCD2-211ENST00000544336 ERVV-1B6SEH8 477 aa36.24■■■■□ 3.39
PDCD2-211ENST00000544336 ZBTB3Q9H5J0 574 aa36.24■■■■□ 3.39
PDCD2-211ENST00000544336 ABCC12Q96J65 1359 aa36.24■■■■□ 3.39
PDCD2-211ENST00000544336 JMYQ8N9B5 988 aa36.23■■■■□ 3.39
PDCD2-211ENST00000544336 NYXQ9GZU5 481 aa36.23■■■■□ 3.39
PDCD2-211ENST00000544336 ZNF277Q9NRM2 450 aaPredicted RBP36.23■■■■□ 3.39
PDCD2-211ENST00000544336 GPTP24298 496 aa36.22■■■■□ 3.39
PDCD2-211ENST00000544336 FKBP4Q02790 459 aaKnown RBP eCLIP36.22■■■■□ 3.39
PDCD2-211ENST00000544336 TSPYL4Q9UJ04 414 aa36.22■■■■□ 3.39
PDCD2-211ENST00000544336 ALDH1B1P30837 517 aa36.2■■■■□ 3.39
PDCD2-211ENST00000544336 RIPK4P57078 832 aa36.19■■■■□ 3.38
PDCD2-211ENST00000544336 POTEIP0CG38 1075 aa36.18■■■■□ 3.38
PDCD2-211ENST00000544336 POTEJP0CG39 1038 aa36.18■■■■□ 3.38
PDCD2-211ENST00000544336 RTKN2Q8IZC4 609 aa36.18■■■■□ 3.38
PDCD2-211ENST00000544336 UBN2Q6ZU65 1347 aa36.17■■■■□ 3.38
PDCD2-211ENST00000544336 RALBP1Q15311 655 aa36.17■■■■□ 3.38
PDCD2-211ENST00000544336 CHADLQ6NUI6 762 aa36.16■■■■□ 3.38
PDCD2-211ENST00000544336 ZNF541Q9H0D2 1346 aa36.15■■■■□ 3.38
PDCD2-211ENST00000544336 EIF2S2P20042 333 aaKnown RBP36.15■■■■□ 3.38
PDCD2-211ENST00000544336 SUSD4Q5VX71 490 aa36.14■■■■□ 3.38
PDCD2-211ENST00000544336 SYNE4Q8N205 404 aa36.14■■■■□ 3.38
PDCD2-211ENST00000544336 SCN4AP35499 1836 aa36.13■■■■□ 3.37
PDCD2-211ENST00000544336 CRY2Q49AN0 593 aa36.13■■■■□ 3.37
PDCD2-211ENST00000544336 RPGRQ92834 1020 aaKnown RBP36.13■■■■□ 3.37
PDCD2-211ENST00000544336 ERBB4Q15303 1308 aa36.12■■■■□ 3.37
PDCD2-211ENST00000544336 IQCA1LA6NCM1 817 aa36.12■■■■□ 3.37
PDCD2-211ENST00000544336 IARSP41252 1262 aaKnown RBP36.11■■■■□ 3.37
PDCD2-211ENST00000544336 ZNF34Q8IZ26 560 aa36.11■■■■□ 3.37
PDCD2-211ENST00000544336 IBTKQ9P2D0 1353 aaPredicted RBP36.11■■■■□ 3.37
PDCD2-211ENST00000544336 ANXA1P04083 346 aa36.1■■■■□ 3.37
PDCD2-211ENST00000544336 TMPOP42166 694 aaKnown RBP36.1■■■■□ 3.37
PDCD2-211ENST00000544336 DDX10Q13206 875 aaKnown RBP36.1■■■■□ 3.37
PDCD2-211ENST00000544336 GIGYF2Q6Y7W6 1299 aaKnown RBP36.1■■■■□ 3.37
PDCD2-211ENST00000544336 L3MBTL3Q96JM7 780 aaPredicted RBP36.1■■■■□ 3.37
PDCD2-211ENST00000544336 CCDC146Q8IYE0 955 aa36.09■■■■□ 3.37
PDCD2-211ENST00000544336 TAF1DQ9H5J8 278 aaPredicted RBP36.09■■■■□ 3.37
PDCD2-211ENST00000544336 NTSR2O95665 410 aa36.08■■■■□ 3.37
PDCD2-211ENST00000544336 NEUROD2Q15784 382 aa36.08■■■■□ 3.37
PDCD2-211ENST00000544336 PROSER3Q2NL68 480 aa36.08■■■■□ 3.37
PDCD2-211ENST00000544336 NECTIN2Q92692 538 aa36.08■■■■□ 3.37
PDCD2-211ENST00000544336 RIC1Q4ADV7 1423 aa36.08■■■■□ 3.37
PDCD2-211ENST00000544336 LMOD3Q0VAK6 560 aa36.07■■■■□ 3.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms