RNA–Protein interactions for RNA: ENST00000544293.1

C2CD3-220, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-220ENST00000544293 PIP4K2AP48426 406 aaPredicted RBP12.89□□□□□ -0.35
C2CD3-220ENST00000544293 LDHDQ86WU2 507 aa12.89□□□□□ -0.35
C2CD3-220ENST00000544293 MASTLQ96GX5 879 aa12.89□□□□□ -0.35
C2CD3-220ENST00000544293 ZNF541Q9H0D2 1346 aa12.88□□□□□ -0.35
C2CD3-220ENST00000544293 TRIM26Q12899 539 aaPredicted RBP12.88□□□□□ -0.35
C2CD3-220ENST00000544293 TTC5Q8N0Z6 440 aa12.88□□□□□ -0.35
C2CD3-220ENST00000544293 CNBD1Q8NA66 436 aa12.88□□□□□ -0.35
C2CD3-220ENST00000544293 PHACTR3Q96KR7 559 aa12.88□□□□□ -0.35
C2CD3-220ENST00000544293 SETDB2Q96T68 719 aa12.88□□□□□ -0.35
C2CD3-220ENST00000544293 TEX13AQ9BXU3 409 aaPredicted RBP12.88□□□□□ -0.35
C2CD3-220ENST00000544293 SCN11AQ9UI33 1791 aa12.88□□□□□ -0.35
C2CD3-220ENST00000544293 SLC4A2P04920 1241 aa12.87□□□□□ -0.35
C2CD3-220ENST00000544293 LBX1P52954 281 aa12.87□□□□□ -0.35
C2CD3-220ENST00000544293 ZNF330Q9Y3S2 320 aaPredicted RBP12.87□□□□□ -0.35
C2CD3-220ENST00000544293 TMEM88BA6NKF7 163 aa12.86□□□□□ -0.35
C2CD3-220ENST00000544293 FZD9O00144 591 aa12.86□□□□□ -0.35
C2CD3-220ENST00000544293 CTCFP49711 727 aaPredicted RBP12.86□□□□□ -0.35
C2CD3-220ENST00000544293 ZNF277Q9NRM2 450 aaPredicted RBP12.86□□□□□ -0.35
C2CD3-220ENST00000544293 DLEC1Q9Y238 1755 aa12.86□□□□□ -0.35
C2CD3-220ENST00000544293 ANKRD31Q8N7Z5 1873 aa12.85□□□□□ -0.35
C2CD3-220ENST00000544293 CEMIPQ8WUJ3 1361 aa12.85□□□□□ -0.35
C2CD3-220ENST00000544293 IQCA1LA6NCM1 817 aa12.85□□□□□ -0.35
C2CD3-220ENST00000544293 RASSF10A6NK89 507 aa12.85□□□□□ -0.35
C2CD3-220ENST00000544293 GNAT3A8MTJ3 354 aa12.85□□□□□ -0.35
C2CD3-220ENST00000544293 NBPF26B4DH59 902 aa12.85□□□□□ -0.35
C2CD3-220ENST00000544293 HSPA8P11142 646 aaKnown RBP12.85□□□□□ -0.35
C2CD3-220ENST00000544293 FMR1Q06787 632 aaKnown RBP eCLIP12.85□□□□□ -0.35
C2CD3-220ENST00000544293 MAP1SQ66K74 1059 aaPredicted RBP12.85□□□□□ -0.35
C2CD3-220ENST00000544293 NBPF10Q6P3W6 841 aaKnown RBP12.85□□□□□ -0.35
C2CD3-220ENST00000544293 SLC51AQ86UW1 340 aa12.85□□□□□ -0.35
C2CD3-220ENST00000544293 DZIP3Q86Y13 1208 aaKnown RBP12.85□□□□□ -0.35
C2CD3-220ENST00000544293 NBPF15Q8N660 670 aa12.85□□□□□ -0.35
C2CD3-220ENST00000544293 FMNL2Q96PY5 1086 aa12.85□□□□□ -0.35
C2CD3-220ENST00000544293 KIF7Q2M1P5 1343 aa12.85□□□□□ -0.35
C2CD3-220ENST00000544293 SLC34A2O95436 690 aa12.84□□□□□ -0.35
C2CD3-220ENST00000544293 EPHX2P34913 555 aa12.84□□□□□ -0.35
C2CD3-220ENST00000544293 FKBP4Q02790 459 aaKnown RBP eCLIP12.84□□□□□ -0.35
C2CD3-220ENST00000544293 CC2D1BQ5T0F9 858 aaKnown RBP12.84□□□□□ -0.35
C2CD3-220ENST00000544293 CLEC4GQ6UXB4 293 aa12.84□□□□□ -0.35
C2CD3-220ENST00000544293 CNTROBQ8N137 903 aa12.84□□□□□ -0.35
C2CD3-220ENST00000544293 SNED1Q8TER0 1413 aa12.84□□□□□ -0.35
C2CD3-220ENST00000544293 CLSPNQ9HAW4 1339 aa12.84□□□□□ -0.35
C2CD3-220ENST00000544293 SLX4Q8IY92 1834 aa12.83□□□□□ -0.35
C2CD3-220ENST00000544293 NPR1P16066 1061 aa12.83□□□□□ -0.36
C2CD3-220ENST00000544293 ST5P78524 1137 aa12.83□□□□□ -0.36
C2CD3-220ENST00000544293 TEFQ10587 303 aa12.83□□□□□ -0.36
C2CD3-220ENST00000544293 CCDC93Q567U6 631 aa12.83□□□□□ -0.36
C2CD3-220ENST00000544293 EAPPQ56P03 285 aaPredicted RBP12.83□□□□□ -0.36
C2CD3-220ENST00000544293 SOGA3Q5TF21 947 aa12.83□□□□□ -0.36
C2CD3-220ENST00000544293 HACL1Q9UJ83 578 aa12.83□□□□□ -0.36
C2CD3-220ENST00000544293 COL3A1P02461 1466 aaPredicted RBP12.83□□□□□ -0.36
C2CD3-220ENST00000544293 FER1L6Q2WGJ9 1857 aa12.82□□□□□ -0.36
C2CD3-220ENST00000544293 COL11A2P13942 1736 aaPredicted RBP12.82□□□□□ -0.36
C2CD3-220ENST00000544293 TIAM2Q8IVF5 1701 aa12.82□□□□□ -0.36
C2CD3-220ENST00000544293 BTBD11A6QL63 1104 aa12.82□□□□□ -0.36
C2CD3-220ENST00000544293 HLFQ16534 295 aa12.82□□□□□ -0.36
C2CD3-220ENST00000544293 DEFB115Q30KQ5 88 aa12.82□□□□□ -0.36
C2CD3-220ENST00000544293 NBPF5PQ86XG9 351 aaPredicted RBP12.82□□□□□ -0.36
C2CD3-220ENST00000544293 SYNE4Q8N205 404 aa12.82□□□□□ -0.36
C2CD3-220ENST00000544293 GAS2L2Q8NHY3 880 aa12.82□□□□□ -0.36
C2CD3-220ENST00000544293 ABHD8Q96I13 439 aa12.82□□□□□ -0.36
C2CD3-220ENST00000544293 RNF123Q5XPI4 1314 aa12.82□□□□□ -0.36
C2CD3-220ENST00000544293 PCGF6Q9BYE7 350 aa12.81□□□□□ -0.36
C2CD3-220ENST00000544293 WDR33Q9C0J8 1336 aaKnown RBP12.81□□□□□ -0.36
C2CD3-220ENST00000544293 UBR2Q8IWV8 1755 aa12.81□□□□□ -0.36
C2CD3-220ENST00000544293 U2SURPO15042 1029 aaKnown RBP12.8□□□□□ -0.36
C2CD3-220ENST00000544293 IARSP41252 1262 aaKnown RBP12.8□□□□□ -0.36
C2CD3-220ENST00000544293 CST9Q5W186 159 aa12.8□□□□□ -0.36
C2CD3-220ENST00000544293 TPTE2Q6XPS3 522 aa12.8□□□□□ -0.36
C2CD3-220ENST00000544293 RTKN2Q8IZC4 609 aa12.8□□□□□ -0.36
C2CD3-220ENST00000544293 RSPH6AQ9H0K4 717 aa12.8□□□□□ -0.36
C2CD3-220ENST00000544293 CLEC11AQ9Y240 323 aa12.8□□□□□ -0.36
C2CD3-220ENST00000544293 CRY2Q49AN0 593 aa12.79□□□□□ -0.36
C2CD3-220ENST00000544293 AIDAQ96BJ3 306 aa12.79□□□□□ -0.36
C2CD3-220ENST00000544293 DDX21Q9NR30 783 aaKnown RBP eCLIP12.79□□□□□ -0.36
C2CD3-220ENST00000544293 NIP7Q9Y221 180 aaKnown RBP eCLIP12.79□□□□□ -0.36
C2CD3-220ENST00000544293 COL4A5P29400 1685 aa12.79□□□□□ -0.36
C2CD3-220ENST00000544293 CCDC88AQ3V6T2 1871 aa12.78□□□□□ -0.36
C2CD3-220ENST00000544293 FAM177BA6PVY3 158 aa12.78□□□□□ -0.36
C2CD3-220ENST00000544293 RGL2O15211 777 aa12.78□□□□□ -0.36
C2CD3-220ENST00000544293 SNRPA1P09661 255 aaKnown RBP12.78□□□□□ -0.36
C2CD3-220ENST00000544293 PRKAR2BP31323 418 aa12.78□□□□□ -0.36
C2CD3-220ENST00000544293 EPS15P42566 896 aa12.78□□□□□ -0.36
C2CD3-220ENST00000544293 RGS19P49795 217 aa12.78□□□□□ -0.36
C2CD3-220ENST00000544293 SCNN1DP51172 638 aa12.78□□□□□ -0.36
C2CD3-220ENST00000544293 FAM161AQ3B820 660 aa12.78□□□□□ -0.36
C2CD3-220ENST00000544293 MCM10Q7L590 875 aa12.78□□□□□ -0.36
C2CD3-220ENST00000544293 PNMA8AQ86V59 439 aaPredicted RBP12.78□□□□□ -0.36
C2CD3-220ENST00000544293 GPC2Q8N158 579 aa12.78□□□□□ -0.36
C2CD3-220ENST00000544293 PSMD1Q99460 953 aa12.78□□□□□ -0.36
C2CD3-220ENST00000544293 ADAMTSL1Q8N6G6 1762 aa12.77□□□□□ -0.36
C2CD3-220ENST00000544293 NPHP1O15259 732 aa12.77□□□□□ -0.37
C2CD3-220ENST00000544293 DCTN1Q14203 1278 aa12.77□□□□□ -0.37
C2CD3-220ENST00000544293 SCN7AQ01118 1682 aa12.77□□□□□ -0.37
C2CD3-220ENST00000544293 TRAF5O00463 557 aa12.76□□□□□ -0.37
C2CD3-220ENST00000544293 ALDH1B1P30837 517 aa12.76□□□□□ -0.37
C2CD3-220ENST00000544293 HOXA10P31260 410 aaPredicted RBP12.76□□□□□ -0.37
C2CD3-220ENST00000544293 MAP2K1Q02750 393 aaPredicted RBP12.76□□□□□ -0.37
C2CD3-220ENST00000544293 CYP4F22Q6NT55 531 aa12.76□□□□□ -0.37
C2CD3-220ENST00000544293 C3orf67Q6ZVT6 689 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms