RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 SSH1Q8WYL5 1049 aa18.53■□□□□ 0.56
TNFRSF1A-216ENST00000543995 ZBTB3Q9H5J0 574 aa18.53■□□□□ 0.56
TNFRSF1A-216ENST00000543995 MAP3K15Q6ZN16 1313 aa18.52■□□□□ 0.56
TNFRSF1A-216ENST00000543995 CAMTA2O94983 1202 aa18.52■□□□□ 0.56
TNFRSF1A-216ENST00000543995 GYS1P13807 737 aa18.52■□□□□ 0.56
TNFRSF1A-216ENST00000543995 G2E3Q7L622 706 aa18.52■□□□□ 0.56
TNFRSF1A-216ENST00000543995 FLIIQ13045 1269 aa18.51■□□□□ 0.55
TNFRSF1A-216ENST00000543995 MTFR1LQ9H019 292 aa18.51■□□□□ 0.55
TNFRSF1A-216ENST00000543995 ZNF652Q9Y2D9 606 aa18.51■□□□□ 0.55
TNFRSF1A-216ENST00000543995 ERVV-1B6SEH8 477 aa18.5■□□□□ 0.55
TNFRSF1A-216ENST00000543995 DDX58O95786 925 aaKnown RBP18.5■□□□□ 0.55
TNFRSF1A-216ENST00000543995 RARSP54136 660 aaKnown RBP18.5■□□□□ 0.55
TNFRSF1A-216ENST00000543995 ANKRD13DQ6ZTN6 518 aa18.5■□□□□ 0.55
TNFRSF1A-216ENST00000543995 RIC3Q7Z5B4 369 aa18.5■□□□□ 0.55
TNFRSF1A-216ENST00000543995 NLGN1Q8N2Q7 840 aa18.5■□□□□ 0.55
TNFRSF1A-216ENST00000543995 MRPL50Q8N5N7 158 aaKnown RBP18.5■□□□□ 0.55
TNFRSF1A-216ENST00000543995 ATF5Q9Y2D1 282 aaPredicted RBP18.5■□□□□ 0.55
TNFRSF1A-216ENST00000543995 NUP98P52948 1817 aa18.5■□□□□ 0.55
TNFRSF1A-216ENST00000543995 FKBP5Q13451 457 aaPredicted RBP18.49■□□□□ 0.55
TNFRSF1A-216ENST00000543995 FKBP8Q14318 412 aa18.49■□□□□ 0.55
TNFRSF1A-216ENST00000543995 PLBD2Q8NHP8 589 aa18.49■□□□□ 0.55
TNFRSF1A-216ENST00000543995 HLFQ16534 295 aa18.49■□□□□ 0.55
TNFRSF1A-216ENST00000543995 CLEC4GQ6UXB4 293 aa18.49■□□□□ 0.55
TNFRSF1A-216ENST00000543995 BCL2L12Q9HB09 334 aa18.49■□□□□ 0.55
TNFRSF1A-216ENST00000543995 ARFGEF2Q9Y6D5 1785 aa18.49■□□□□ 0.55
TNFRSF1A-216ENST00000543995 BICDL1Q6ZP65 573 aa18.48■□□□□ 0.55
TNFRSF1A-216ENST00000543995 GIGYF2Q6Y7W6 1299 aaKnown RBP18.47■□□□□ 0.55
TNFRSF1A-216ENST00000543995 PI4KAP2A4QPH2 592 aa18.46■□□□□ 0.55
TNFRSF1A-216ENST00000543995 RGL2O15211 777 aa18.46■□□□□ 0.55
TNFRSF1A-216ENST00000543995 BCAR3O75815 825 aa18.46■□□□□ 0.55
TNFRSF1A-216ENST00000543995 TBC1D9BQ66K14 1250 aa18.46■□□□□ 0.55
TNFRSF1A-216ENST00000543995 KSR2Q6VAB6 950 aa18.46■□□□□ 0.55
TNFRSF1A-216ENST00000543995 PI4KAP1Q8N8J0 262 aa18.46■□□□□ 0.55
TNFRSF1A-216ENST00000543995 SPON1Q9HCB6 807 aa18.46■□□□□ 0.55
TNFRSF1A-216ENST00000543995 MAP3K2Q9Y2U5 619 aa18.46■□□□□ 0.55
TNFRSF1A-216ENST00000543995 ANKRD36CQ5JPF3 1778 aa18.46■□□□□ 0.54
TNFRSF1A-216ENST00000543995 POLD1P28340 1107 aa18.45■□□□□ 0.54
TNFRSF1A-216ENST00000543995 HSP90AB3PQ58FF7 597 aa18.45■□□□□ 0.54
TNFRSF1A-216ENST00000543995 RCAN3Q9UKA8 241 aa18.45■□□□□ 0.54
TNFRSF1A-216ENST00000543995 NIP7Q9Y221 180 aaKnown RBP eCLIP18.45■□□□□ 0.54
TNFRSF1A-216ENST00000543995 PTPRCP08575 1304 aa18.45■□□□□ 0.54
TNFRSF1A-216ENST00000543995 KIF16BQ96L93 1317 aa18.45■□□□□ 0.54
TNFRSF1A-216ENST00000543995 MMP10P09238 476 aa18.44■□□□□ 0.54
TNFRSF1A-216ENST00000543995 NFIXQ14938 502 aa18.44■□□□□ 0.54
TNFRSF1A-216ENST00000543995 SETDB2Q96T68 719 aa18.44■□□□□ 0.54
TNFRSF1A-216ENST00000543995 NOB1Q9ULX3 412 aaKnown RBP18.44■□□□□ 0.54
TNFRSF1A-216ENST00000543995 ADCY9O60503 1353 aa18.44■□□□□ 0.54
TNFRSF1A-216ENST00000543995 GPTP24298 496 aa18.44■□□□□ 0.54
TNFRSF1A-216ENST00000543995 BRPF1P55201 1214 aaPredicted RBP18.44■□□□□ 0.54
TNFRSF1A-216ENST00000543995 FRAT1Q92837 279 aaPredicted RBP18.44■□□□□ 0.54
TNFRSF1A-216ENST00000543995 COL24A1Q17RW2 1714 aa18.43■□□□□ 0.54
TNFRSF1A-216ENST00000543995 TM4SF1P30408 202 aa18.43■□□□□ 0.54
TNFRSF1A-216ENST00000543995 TCIRG1Q13488 830 aa18.43■□□□□ 0.54
TNFRSF1A-216ENST00000543995 MYD88Q99836 296 aa18.43■□□□□ 0.54
TNFRSF1A-216ENST00000543995 METTL22Q9BUU2 404 aaPredicted RBP18.43■□□□□ 0.54
TNFRSF1A-216ENST00000543995 PARP3Q9Y6F1 533 aa18.43■□□□□ 0.54
TNFRSF1A-216ENST00000543995 ATP10DQ9P241 1426 aa18.42■□□□□ 0.54
TNFRSF1A-216ENST00000543995 F6X3S4 739 aa18.42■□□□□ 0.54
TNFRSF1A-216ENST00000543995 NEXNQ0ZGT2 675 aa18.42■□□□□ 0.54
TNFRSF1A-216ENST00000543995 DNAAF4Q8WXU2 420 aa18.42■□□□□ 0.54
TNFRSF1A-216ENST00000543995 CARMIL3Q8ND23 1372 aa18.41■□□□□ 0.54
TNFRSF1A-216ENST00000543995 NPHP1O15259 732 aa18.41■□□□□ 0.54
TNFRSF1A-216ENST00000543995 IPO8O15397 1037 aaKnown RBP18.41■□□□□ 0.54
TNFRSF1A-216ENST00000543995 FAM177BA6PVY3 158 aa18.4■□□□□ 0.54
TNFRSF1A-216ENST00000543995 ATP5J2-PTCD1G3V325 749 aa18.4■□□□□ 0.54
TNFRSF1A-216ENST00000543995 POLRMTO00411 1230 aaKnown RBP18.4■□□□□ 0.54
TNFRSF1A-216ENST00000543995 PTGER2P43116 358 aa18.4■□□□□ 0.54
TNFRSF1A-216ENST00000543995 DDR1Q08345 913 aa18.4■□□□□ 0.54
TNFRSF1A-216ENST00000543995 SLC4A10Q6U841 1118 aa18.4■□□□□ 0.54
TNFRSF1A-216ENST00000543995 ZNF34Q8IZ26 560 aa18.4■□□□□ 0.54
TNFRSF1A-216ENST00000543995 AFDNP55196 1824 aaKnown RBP18.4■□□□□ 0.54
TNFRSF1A-216ENST00000543995 SERPINB2P05120 415 aa18.39■□□□□ 0.54
TNFRSF1A-216ENST00000543995 API5Q9BZZ5 524 aaKnown RBP18.39■□□□□ 0.54
TNFRSF1A-216ENST00000543995 UBN2Q6ZU65 1347 aa18.39■□□□□ 0.53
TNFRSF1A-216ENST00000543995 PARP10Q53GL7 1025 aa18.39■□□□□ 0.53
TNFRSF1A-216ENST00000543995 NBPF5PQ86XG9 351 aaPredicted RBP18.39■□□□□ 0.53
TNFRSF1A-216ENST00000543995 SGIP1Q9BQI5 828 aa18.39■□□□□ 0.53
TNFRSF1A-216ENST00000543995 ZKSCAN2Q63HK3 967 aa18.38■□□□□ 0.53
TNFRSF1A-216ENST00000543995 PPP1R42Q7Z4L9 355 aa18.38■□□□□ 0.53
TNFRSF1A-216ENST00000543995 ARHGAP45Q92619 1136 aa18.38■□□□□ 0.53
TNFRSF1A-216ENST00000543995 ISCA1Q9BUE6 129 aa18.38■□□□□ 0.53
TNFRSF1A-216ENST00000543995 PPP1R1BQ9UD71 204 aaPredicted RBP18.38■□□□□ 0.53
TNFRSF1A-216ENST00000543995 GTF2E1P29083 439 aaPredicted RBP18.37■□□□□ 0.53
TNFRSF1A-216ENST00000543995 SUSD4Q5VX71 490 aa18.37■□□□□ 0.53
TNFRSF1A-216ENST00000543995 TPTE2Q6XPS3 522 aa18.37■□□□□ 0.53
TNFRSF1A-216ENST00000543995 NLRP10Q86W26 655 aa18.37■□□□□ 0.53
TNFRSF1A-216ENST00000543995 NYXQ9GZU5 481 aa18.37■□□□□ 0.53
TNFRSF1A-216ENST00000543995 CWF19L2Q2TBE0 894 aaKnown RBP18.36■□□□□ 0.53
TNFRSF1A-216ENST00000543995 ATF7IPQ6VMQ6 1270 aa18.36■□□□□ 0.53
TNFRSF1A-216ENST00000543995 KLHL34Q8N239 644 aa18.36■□□□□ 0.53
TNFRSF1A-216ENST00000543995 CNBD1Q8NA66 436 aa18.36■□□□□ 0.53
TNFRSF1A-216ENST00000543995 UTP14AQ9BVJ6 771 aaKnown RBP18.36■□□□□ 0.53
TNFRSF1A-216ENST00000543995 CWC25Q9NXE8 425 aaPredicted RBP18.36■□□□□ 0.53
TNFRSF1A-216ENST00000543995 NRXN2Q9P2S2 1712 aa18.35■□□□□ 0.53
TNFRSF1A-216ENST00000543995 NEURL1BA8MQ27 555 aa18.35■□□□□ 0.53
TNFRSF1A-216ENST00000543995 TRIM27P14373 513 aa18.35■□□□□ 0.53
TNFRSF1A-216ENST00000543995 CCDC191Q8NCU4 936 aa18.35■□□□□ 0.53
TNFRSF1A-216ENST00000543995 LINS1Q8NG48 757 aa18.35■□□□□ 0.53
TNFRSF1A-216ENST00000543995 IGKV5-2P06315 115 aa18.34■□□□□ 0.53
TNFRSF1A-216ENST00000543995 ST5P78524 1137 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms