RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 ARFGEF2Q9Y6D5 1785 aa19.47■□□□□ 0.71
CD9-210ENST00000543916 TCERG1O14776 1098 aaKnown RBP19.46■□□□□ 0.71
CD9-210ENST00000543916 XAGE3Q8WTP9 111 aa19.46■□□□□ 0.71
CD9-210ENST00000543916 PPP1R1BQ9UD71 204 aaPredicted RBP19.46■□□□□ 0.71
CD9-210ENST00000543916 SRCAPQ6ZRS2 3230 aa19.46■□□□□ 0.71
CD9-210ENST00000543916 ZBED9Q6R2W3 1325 aa19.46■□□□□ 0.71
CD9-210ENST00000543916 MAP3K15Q6ZN16 1313 aa19.46■□□□□ 0.71
CD9-210ENST00000543916 TM4SF1P30408 202 aa19.45■□□□□ 0.7
CD9-210ENST00000543916 DDR1Q08345 913 aa19.45■□□□□ 0.7
CD9-210ENST00000543916 NFIXQ14938 502 aa19.45■□□□□ 0.7
CD9-210ENST00000543916 HLFQ16534 295 aa19.45■□□□□ 0.7
CD9-210ENST00000543916 TBC1D9BQ66K14 1250 aa19.45■□□□□ 0.7
CD9-210ENST00000543916 KIF6Q6ZMV9 814 aa19.45■□□□□ 0.7
CD9-210ENST00000543916 COPS6Q7L5N1 327 aa19.45■□□□□ 0.7
CD9-210ENST00000543916 KIF13BQ9NQT8 1826 aa19.44■□□□□ 0.7
CD9-210ENST00000543916 AIMP1Q12904 312 aaKnown RBP19.44■□□□□ 0.7
CD9-210ENST00000543916 ZBTB3Q9H5J0 574 aa19.44■□□□□ 0.7
CD9-210ENST00000543916 PHAXQ9H814 394 aaKnown RBP19.44■□□□□ 0.7
CD9-210ENST00000543916 HYPKQ9NX55 129 aa19.44■□□□□ 0.7
CD9-210ENST00000543916 CACNA1FO60840 1977 aa19.44■□□□□ 0.7
CD9-210ENST00000543916 ERVV-1B6SEH8 477 aa19.43■□□□□ 0.7
CD9-210ENST00000543916 POLRMTO00411 1230 aaKnown RBP19.43■□□□□ 0.7
CD9-210ENST00000543916 BICDL1Q6ZP65 573 aa19.43■□□□□ 0.7
CD9-210ENST00000543916 CHMP4AQ9BY43 222 aa19.43■□□□□ 0.7
CD9-210ENST00000543916 CLEC4GQ6UXB4 293 aa19.42■□□□□ 0.7
CD9-210ENST00000543916 STK31Q9BXU1 1019 aa19.42■□□□□ 0.7
CD9-210ENST00000543916 ZNF652Q9Y2D9 606 aa19.42■□□□□ 0.7
CD9-210ENST00000543916 PARP3Q9Y6F1 533 aa19.42■□□□□ 0.7
CD9-210ENST00000543916 RGL2O15211 777 aa19.41■□□□□ 0.7
CD9-210ENST00000543916 KIAA1551Q9HCM1 1747 aa19.41■□□□□ 0.7
CD9-210ENST00000543916 ATP10DQ9P241 1426 aa19.41■□□□□ 0.7
CD9-210ENST00000543916 GIGYF2Q6Y7W6 1299 aaKnown RBP19.4■□□□□ 0.7
CD9-210ENST00000543916 FHDC1Q9C0D6 1143 aaPredicted RBP19.4■□□□□ 0.7
CD9-210ENST00000543916 CARMIL3Q8ND23 1372 aa19.4■□□□□ 0.7
CD9-210ENST00000543916 C10orf71Q711Q0 1435 aa19.4■□□□□ 0.7
CD9-210ENST00000543916 SLC4A2P04920 1241 aa19.39■□□□□ 0.69
CD9-210ENST00000543916 G2E3Q7L622 706 aa19.39■□□□□ 0.69
CD9-210ENST00000543916 KLHL34Q8N239 644 aa19.38■□□□□ 0.69
CD9-210ENST00000543916 ANKRD31Q8N7Z5 1873 aa19.38■□□□□ 0.69
CD9-210ENST00000543916 PLBD2Q8NHP8 589 aa19.38■□□□□ 0.69
CD9-210ENST00000543916 SETDB2Q96T68 719 aa19.38■□□□□ 0.69
CD9-210ENST00000543916 NIP7Q9Y221 180 aaKnown RBP eCLIP19.38■□□□□ 0.69
CD9-210ENST00000543916 SERPINB2P05120 415 aa19.37■□□□□ 0.69
CD9-210ENST00000543916 ANKRD13DQ6ZTN6 518 aa19.37■□□□□ 0.69
CD9-210ENST00000543916 N4BP2Q86UW6 1770 aaPredicted RBP19.37■□□□□ 0.69
CD9-210ENST00000543916 UBN2Q6ZU65 1347 aa19.36■□□□□ 0.69
CD9-210ENST00000543916 GPTP24298 496 aa19.36■□□□□ 0.69
CD9-210ENST00000543916 ZNF34Q8IZ26 560 aa19.35■□□□□ 0.69
CD9-210ENST00000543916 SYT17Q9BSW7 474 aa19.35■□□□□ 0.69
CD9-210ENST00000543916 ADCY9O60503 1353 aa19.34■□□□□ 0.69
CD9-210ENST00000543916 FLIIQ13045 1269 aa19.34■□□□□ 0.69
CD9-210ENST00000543916 NLGN2Q8NFZ4 835 aa19.34■□□□□ 0.69
CD9-210ENST00000543916 CD2APQ9Y5K6 639 aa19.34■□□□□ 0.69
CD9-210ENST00000543916 FAM177BA6PVY3 158 aa19.33■□□□□ 0.68
CD9-210ENST00000543916 TCIRG1Q13488 830 aa19.33■□□□□ 0.68
CD9-210ENST00000543916 PRR5LQ6MZQ0 368 aa19.33■□□□□ 0.68
CD9-210ENST00000543916 RIC3Q7Z5B4 369 aa19.33■□□□□ 0.68
CD9-210ENST00000543916 SSH1Q8WYL5 1049 aa19.33■□□□□ 0.68
CD9-210ENST00000543916 COL11A2P13942 1736 aaPredicted RBP19.33■□□□□ 0.68
CD9-210ENST00000543916 TNRC6CQ9HCJ0 1690 aaKnown RBP19.33■□□□□ 0.68
CD9-210ENST00000543916 DLEC1Q9Y238 1755 aa19.32■□□□□ 0.68
CD9-210ENST00000543916 DDX58O95786 925 aaKnown RBP19.32■□□□□ 0.68
CD9-210ENST00000543916 CT47B1P0C2W7 299 aaPredicted RBP19.32■□□□□ 0.68
CD9-210ENST00000543916 HSP90AB3PQ58FF7 597 aa19.32■□□□□ 0.68
CD9-210ENST00000543916 NBPF5PQ86XG9 351 aaPredicted RBP19.32■□□□□ 0.68
CD9-210ENST00000543916 CCDC24Q8N4L8 307 aa19.32■□□□□ 0.68
CD9-210ENST00000543916 MRPL50Q8N5N7 158 aaKnown RBP19.32■□□□□ 0.68
CD9-210ENST00000543916 ZNF428Q96B54 188 aa19.32■□□□□ 0.68
CD9-210ENST00000543916 BCL2L13Q9BXK5 485 aa19.32■□□□□ 0.68
CD9-210ENST00000543916 PXDNLA1KZ92 1463 aa19.32■□□□□ 0.68
CD9-210ENST00000543916 BRCA1P38398 1863 aaKnown RBP19.31■□□□□ 0.68
CD9-210ENST00000543916 PI4KAP2A4QPH2 592 aa19.31■□□□□ 0.68
CD9-210ENST00000543916 SUSD4Q5VX71 490 aa19.31■□□□□ 0.68
CD9-210ENST00000543916 KSR2Q6VAB6 950 aa19.31■□□□□ 0.68
CD9-210ENST00000543916 PI4KAP1Q8N8J0 262 aa19.31■□□□□ 0.68
CD9-210ENST00000543916 CNBD1Q8NA66 436 aa19.31■□□□□ 0.68
CD9-210ENST00000543916 YTHDC1Q96MU7 727 aaKnown RBP19.31■□□□□ 0.68
CD9-210ENST00000543916 MAP3K2Q9Y2U5 619 aa19.31■□□□□ 0.68
CD9-210ENST00000543916 IBTKQ9P2D0 1353 aaPredicted RBP19.31■□□□□ 0.68
CD9-210ENST00000543916 ATP5J2-PTCD1G3V325 749 aa19.3■□□□□ 0.68
CD9-210ENST00000543916 FKBP5Q13451 457 aaPredicted RBP19.3■□□□□ 0.68
CD9-210ENST00000543916 ALDH1L2Q3SY69 923 aa19.3■□□□□ 0.68
CD9-210ENST00000543916 PARP10Q53GL7 1025 aa19.3■□□□□ 0.68
CD9-210ENST00000543916 NLRP10Q86W26 655 aa19.3■□□□□ 0.68
CD9-210ENST00000543916 ISCA1Q9BUE6 129 aa19.3■□□□□ 0.68
CD9-210ENST00000543916 NTSR2O95665 410 aa19.29■□□□□ 0.68
CD9-210ENST00000543916 MYD88Q99836 296 aa19.29■□□□□ 0.68
CD9-210ENST00000543916 METTL22Q9BUU2 404 aaPredicted RBP19.29■□□□□ 0.68
CD9-210ENST00000543916 ABCC12Q96J65 1359 aa19.29■□□□□ 0.68
CD9-210ENST00000543916 DDX60Q8IY21 1712 aaKnown RBP19.28■□□□□ 0.68
CD9-210ENST00000543916 NPHP1O15259 732 aa19.28■□□□□ 0.68
CD9-210ENST00000543916 RARSP54136 660 aaKnown RBP19.28■□□□□ 0.68
CD9-210ENST00000543916 NUTM1Q86Y26 1132 aa19.28■□□□□ 0.68
CD9-210ENST00000543916 SMC4Q9NTJ3 1288 aa19.28■□□□□ 0.68
CD9-210ENST00000543916 LAMB2P55268 1798 aa19.28■□□□□ 0.68
CD9-210ENST00000543916 ST5P78524 1137 aa19.27■□□□□ 0.68
CD9-210ENST00000543916 TPTE2Q6XPS3 522 aa19.27■□□□□ 0.68
CD9-210ENST00000543916 PPP1R42Q7Z4L9 355 aa19.27■□□□□ 0.68
CD9-210ENST00000543916 NYXQ9GZU5 481 aa19.27■□□□□ 0.68
CD9-210ENST00000543916 F6X3S4 739 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms