RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-208ENST00000543525 PLEKHG5O94827 1062 aa16.29■□□□□ 0.2
PPME1-208ENST00000543525 LSG1Q9H089 658 aaKnown RBP16.29■□□□□ 0.2
PPME1-208ENST00000543525 IL25Q9H293 177 aa16.29■□□□□ 0.2
PPME1-208ENST00000543525 PXDNQ92626 1479 aa16.29■□□□□ 0.2
PPME1-208ENST00000543525 SNX14Q9Y5W7 946 aa16.29■□□□□ 0.2
PPME1-208ENST00000543525 WDR33Q9C0J8 1336 aaKnown RBP16.28■□□□□ 0.2
PPME1-208ENST00000543525 DDX58O95786 925 aaKnown RBP16.28■□□□□ 0.2
PPME1-208ENST00000543525 DIAPH3Q9NSV4 1193 aa16.28■□□□□ 0.2
PPME1-208ENST00000543525 RBM27Q9P2N5 1060 aaKnown RBP16.28■□□□□ 0.2
PPME1-208ENST00000543525 ROBO1Q9Y6N7 1651 aa16.27■□□□□ 0.2
PPME1-208ENST00000543525 CAMTA1Q9Y6Y1 1673 aa16.27■□□□□ 0.2
PPME1-208ENST00000543525 LMOD2Q6P5Q4 547 aa16.27■□□□□ 0.2
PPME1-208ENST00000543525 ORAI2Q96SN7 254 aa16.27■□□□□ 0.2
PPME1-208ENST00000543525 ECHDC1Q9NTX5 307 aa16.27■□□□□ 0.2
PPME1-208ENST00000543525 CRYBG1Q9Y4K1 1723 aa16.27■□□□□ 0.2
PPME1-208ENST00000543525 IFIT2P09913 472 aaKnown RBP16.27■□□□□ 0.19
PPME1-208ENST00000543525 LRSAM1Q6UWE0 723 aa16.27■□□□□ 0.19
PPME1-208ENST00000543525 PRIM1P49642 420 aaKnown RBP16.26■□□□□ 0.19
PPME1-208ENST00000543525 CWC27Q6UX04 472 aaKnown RBP16.26■□□□□ 0.19
PPME1-208ENST00000543525 LINS1Q8NG48 757 aa16.26■□□□□ 0.19
PPME1-208ENST00000543525 SYAP1Q96A49 352 aaPredicted RBP16.26■□□□□ 0.19
PPME1-208ENST00000543525 RBSNQ9H1K0 784 aa16.26■□□□□ 0.19
PPME1-208ENST00000543525 ERBB4Q15303 1308 aa16.26■□□□□ 0.19
PPME1-208ENST00000543525 JCADQ9P266 1359 aa16.26■□□□□ 0.19
PPME1-208ENST00000543525 XPCQ01831 940 aaPredicted RBP16.25■□□□□ 0.19
PPME1-208ENST00000543525 PROSER3Q2NL68 480 aa16.25■□□□□ 0.19
PPME1-208ENST00000543525 TTC14Q96N46 770 aa16.25■□□□□ 0.19
PPME1-208ENST00000543525 TMEM63CQ9P1W3 806 aa16.25■□□□□ 0.19
PPME1-208ENST00000543525 KRT28Q7Z3Y7 464 aa16.25■□□□□ 0.19
PPME1-208ENST00000543525 NAP1L5Q96NT1 182 aaPredicted RBP16.25■□□□□ 0.19
PPME1-208ENST00000543525 DDX21Q9NR30 783 aaKnown RBP eCLIP16.25■□□□□ 0.19
PPME1-208ENST00000543525 LIMCH1Q9UPQ0 1083 aa16.25■□□□□ 0.19
PPME1-208ENST00000543525 GRM8O00222 908 aa16.24■□□□□ 0.19
PPME1-208ENST00000543525 EVI5LQ96CN4 794 aa16.24■□□□□ 0.19
PPME1-208ENST00000543525 CHAMP1Q96JM3 812 aa16.24■□□□□ 0.19
PPME1-208ENST00000543525 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.24■□□□□ 0.19
PPME1-208ENST00000543525 UTYO14607 1347 aa16.24■□□□□ 0.19
PPME1-208ENST00000543525 SIPA1L3O60292 1781 aaPredicted RBP16.24■□□□□ 0.19
PPME1-208ENST00000543525 G3BP1Q13283 466 aaKnown RBP eCLIP16.23■□□□□ 0.199e-7■■■■□ 26.6
PPME1-208ENST00000543525 CWF19L2Q2TBE0 894 aaKnown RBP16.23■□□□□ 0.19
PPME1-208ENST00000543525 HS1BP3Q53T59 392 aa16.23■□□□□ 0.19
PPME1-208ENST00000543525 PROSER2Q86WR7 435 aaPredicted RBP16.23■□□□□ 0.19
PPME1-208ENST00000543525 TRPM3Q9HCF6 1732 aaPredicted RBP16.23■□□□□ 0.19
PPME1-208ENST00000543525 SYCE3A1L190 88 aa16.23■□□□□ 0.19
PPME1-208ENST00000543525 HIP1O00291 1037 aa16.23■□□□□ 0.19
PPME1-208ENST00000543525 AK2P54819 239 aa16.23■□□□□ 0.19
PPME1-208ENST00000543525 AACSQ86V21 672 aa16.23■□□□□ 0.19
PPME1-208ENST00000543525 ZSCAN30Q86W11 494 aa16.23■□□□□ 0.19
PPME1-208ENST00000543525 RASEFQ8IZ41 740 aa16.23■□□□□ 0.19
PPME1-208ENST00000543525 NSFL1CQ9UNZ2 370 aaKnown RBP16.23■□□□□ 0.19
PPME1-208ENST00000543525 SPG7Q9UQ90 795 aa16.23■□□□□ 0.19
PPME1-208ENST00000543525 ADAMTS7Q9UKP4 1686 aa16.22■□□□□ 0.19
PPME1-208ENST00000543525 SUCLG2Q96I99 432 aa16.22■□□□□ 0.19
PPME1-208ENST00000543525 PA2G4Q9UQ80 394 aaKnown RBP16.22■□□□□ 0.19
PPME1-208ENST00000543525 KIF1AQ12756 1690 aa16.22■□□□□ 0.19
PPME1-208ENST00000543525 PHF14O94880 888 aa16.21■□□□□ 0.19
PPME1-208ENST00000543525 LARP1Q6PKG0 1096 aaKnown RBP16.21■□□□□ 0.19
PPME1-208ENST00000543525 TM6SF1Q9BZW5 370 aa16.21■□□□□ 0.19
PPME1-208ENST00000543525 AXIN2Q9Y2T1 843 aa16.21■□□□□ 0.19
PPME1-208ENST00000543525 MST1RQ04912 1400 aa16.21■□□□□ 0.19
PPME1-208ENST00000543525 RPAP1Q9BWH6 1393 aaPredicted RBP16.21■□□□□ 0.19
PPME1-208ENST00000543525 PRAMEF22A3QJZ6 481 aa16.21■□□□□ 0.19
PPME1-208ENST00000543525 ZNF772Q68DY9 489 aaPredicted RBP16.21■□□□□ 0.19
PPME1-208ENST00000543525 RUFY3Q7L099 469 aa16.21■□□□□ 0.19
PPME1-208ENST00000543525 KCNB2Q92953 911 aa16.21■□□□□ 0.19
PPME1-208ENST00000543525 ZSCAN31Q96LW9 406 aaPredicted RBP16.21■□□□□ 0.19
PPME1-208ENST00000543525 SMC3Q9UQE7 1217 aa16.21■□□□□ 0.19
PPME1-208ENST00000543525 CASTP20810 708 aaKnown RBP16.2■□□□□ 0.18
PPME1-208ENST00000543525 NEXNQ0ZGT2 675 aa16.2■□□□□ 0.18
PPME1-208ENST00000543525 AIMP1Q12904 312 aaKnown RBP16.2■□□□□ 0.18
PPME1-208ENST00000543525 VPS53Q5VIR6 699 aa16.2■□□□□ 0.18
PPME1-208ENST00000543525 RIC3Q7Z5B4 369 aa16.2■□□□□ 0.18
PPME1-208ENST00000543525 TMEM87AQ8NBN3 555 aa16.2■□□□□ 0.18
PPME1-208ENST00000543525 RAPGEF4Q8WZA2 1011 aa16.2■□□□□ 0.18
PPME1-208ENST00000543525 PDLIM2Q96JY6 352 aa16.2■□□□□ 0.18
PPME1-208ENST00000543525 BICC1Q9H694 974 aaKnown RBP16.2■□□□□ 0.18
PPME1-208ENST00000543525 ZSCAN22P10073 491 aaPredicted RBP16.19■□□□□ 0.18
PPME1-208ENST00000543525 MSNP26038 577 aaKnown RBP16.19■□□□□ 0.18
PPME1-208ENST00000543525 PDIA6Q15084 440 aa16.19■□□□□ 0.18
PPME1-208ENST00000543525 USP48Q86UV5 1035 aa16.19■□□□□ 0.18
PPME1-208ENST00000543525 TSPY26PQ9H489 355 aa16.19■□□□□ 0.18
PPME1-208ENST00000543525 PDRG1Q9NUG6 133 aa16.19■□□□□ 0.18
PPME1-208ENST00000543525 SLAIN2Q9P270 581 aa16.19■□□□□ 0.18
PPME1-208ENST00000543525 ERBB3P21860 1342 aa16.19■□□□□ 0.18
PPME1-208ENST00000543525 TATP17735 454 aaPredicted RBP16.19■□□□□ 0.18
PPME1-208ENST00000543525 PTH1RQ03431 593 aa16.19■□□□□ 0.18
PPME1-208ENST00000543525 ZNF790Q6PG37 636 aa16.19■□□□□ 0.18
PPME1-208ENST00000543525 SH2B1Q9NRF2 756 aaPredicted RBP16.19■□□□□ 0.18
PPME1-208ENST00000543525 ATP6V1DQ9Y5K8 247 aa16.19■□□□□ 0.18
PPME1-208ENST00000543525 CYP46A1Q9Y6A2 500 aa16.19■□□□□ 0.18
PPME1-208ENST00000543525 ZKSCAN1P17029 563 aaPredicted RBP16.18■□□□□ 0.18
PPME1-208ENST00000543525 PRPF40BQ6NWY9 871 aaKnown RBP16.18■□□□□ 0.18
PPME1-208ENST00000543525 JAKMIP1Q96N16 626 aaKnown RBP16.18■□□□□ 0.18
PPME1-208ENST00000543525 SLC52A2Q9HAB3 445 aa16.18■□□□□ 0.18
PPME1-208ENST00000543525 ZSWIM6Q9HCJ5 1215 aa16.18■□□□□ 0.18
PPME1-208ENST00000543525 PHLPP1O60346 1717 aa16.18■□□□□ 0.18
PPME1-208ENST00000543525 C1orf167Q5SNV9 1468 aa16.18■□□□□ 0.18
PPME1-208ENST00000543525 SPATA31A6Q5VVP1 1343 aa16.18■□□□□ 0.18
PPME1-208ENST00000543525 CCDC171Q6TFL3 1326 aa16.18■□□□□ 0.18
PPME1-208ENST00000543525 STX6O43752 255 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 529.8 ms