RNA–Protein interactions for RNA: ENST00000543415.5

GTF2H3-213, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 5

Gene GTF2H3, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-213ENST00000543415 ADAM23O75077 832 aa6.43□□□□□ -1.38
GTF2H3-213ENST00000543415 MAPTP10636 758 aaKnown RBP6.43□□□□□ -1.38
GTF2H3-213ENST00000543415 EPHA4P54764 986 aa6.43□□□□□ -1.38
GTF2H3-213ENST00000543415 LINC00114Q6XXX2 140 aa6.43□□□□□ -1.38
GTF2H3-213ENST00000543415 PPP1R12CQ9BZL4 782 aa6.43□□□□□ -1.38
GTF2H3-213ENST00000543415 NOP53Q9NZM5 478 aaKnown RBP6.43□□□□□ -1.38
GTF2H3-213ENST00000543415 MKRN1Q9UHC7 482 aaKnown RBP6.43□□□□□ -1.38
GTF2H3-213ENST00000543415 KHNYNO15037 678 aaKnown RBP6.42□□□□□ -1.38
GTF2H3-213ENST00000543415 DKK1O94907 266 aa6.42□□□□□ -1.38
GTF2H3-213ENST00000543415 FAM157BP0CG42 384 aa6.42□□□□□ -1.38
GTF2H3-213ENST00000543415 HOXB4P17483 251 aaPredicted RBP6.42□□□□□ -1.38
GTF2H3-213ENST00000543415 COL8A1P27658 744 aa6.42□□□□□ -1.38
GTF2H3-213ENST00000543415 LMOD1P29536 600 aaPredicted RBP6.42□□□□□ -1.38
GTF2H3-213ENST00000543415 PDE4CQ08493 712 aa6.42□□□□□ -1.38
GTF2H3-213ENST00000543415 LAMC2Q13753 1193 aa6.42□□□□□ -1.38
GTF2H3-213ENST00000543415 GRIN2CQ14957 1233 aa6.42□□□□□ -1.38
GTF2H3-213ENST00000543415 SAMD5Q5TGI4 173 aa6.42□□□□□ -1.38
GTF2H3-213ENST00000543415 TRIM50Q86XT4 487 aa6.42□□□□□ -1.38
GTF2H3-213ENST00000543415 OGFOD1Q8N543 542 aa6.42□□□□□ -1.38
GTF2H3-213ENST00000543415 TPCN2Q8NHX9 752 aa6.42□□□□□ -1.38
GTF2H3-213ENST00000543415 ZIC5Q96T25 663 aa6.42□□□□□ -1.38
GTF2H3-213ENST00000543415 DCDC2BA2VCK2 349 aa6.41□□□□□ -1.38
GTF2H3-213ENST00000543415 DGKGP49619 791 aa6.41□□□□□ -1.38
GTF2H3-213ENST00000543415 CFAP70Q5T0N1 1121 aa6.41□□□□□ -1.38
GTF2H3-213ENST00000543415 CCDC102BQ68D86 513 aa6.41□□□□□ -1.38
GTF2H3-213ENST00000543415 BICDL1Q6ZP65 573 aa6.41□□□□□ -1.38
GTF2H3-213ENST00000543415 ZNF594Q96JF6 807 aaPredicted RBP6.41□□□□□ -1.38
GTF2H3-213ENST00000543415 SCHIP1Q9P0W5 487 aaPredicted RBP6.41□□□□□ -1.38
GTF2H3-213ENST00000543415 CD33P20138 364 aa6.4□□□□□ -1.38
GTF2H3-213ENST00000543415 TBCELQ5QJ74 424 aa6.4□□□□□ -1.38
GTF2H3-213ENST00000543415 KANK4Q5T7N3 995 aaPredicted RBP6.4□□□□□ -1.38
GTF2H3-213ENST00000543415 CHSY3Q70JA7 882 aa6.4□□□□□ -1.38
GTF2H3-213ENST00000543415 TNS4Q8IZW8 715 aa6.4□□□□□ -1.38
GTF2H3-213ENST00000543415 SIX5Q8N196 739 aa6.4□□□□□ -1.38
GTF2H3-213ENST00000543415 ZDHHC1Q8WTX9 485 aa6.4□□□□□ -1.38
GTF2H3-213ENST00000543415 MARK1Q9P0L2 795 aa6.4□□□□□ -1.38
GTF2H3-213ENST00000543415 PRR12Q9ULL5 1215 aa6.4□□□□□ -1.38
GTF2H3-213ENST00000543415 GPC6Q9Y625 555 aaPredicted RBP6.4□□□□□ -1.38
GTF2H3-213ENST00000543415 SFI1A8K8P3 1242 aa6.39□□□□□ -1.39
GTF2H3-213ENST00000543415 K7ELQ4 463 aaPredicted RBP6.39□□□□□ -1.39
GTF2H3-213ENST00000543415 BAG6P46379 1132 aa6.39□□□□□ -1.39
GTF2H3-213ENST00000543415 ATP1A2P50993 1020 aa6.39□□□□□ -1.39
GTF2H3-213ENST00000543415 TEAD4Q15561 434 aa6.39□□□□□ -1.39
GTF2H3-213ENST00000543415 CRTC2Q53ET0 693 aaPredicted RBP6.39□□□□□ -1.39
GTF2H3-213ENST00000543415 CDCA8Q53HL2 280 aa6.39□□□□□ -1.39
GTF2H3-213ENST00000543415 ZNF468Q5VIY5 522 aaPredicted RBP6.39□□□□□ -1.39
GTF2H3-213ENST00000543415 LARGE2Q8N3Y3 721 aa6.39□□□□□ -1.39
GTF2H3-213ENST00000543415 SUV39H2Q9H5I1 410 aa6.39□□□□□ -1.39
GTF2H3-213ENST00000543415 PARP3Q9Y6F1 533 aa6.39□□□□□ -1.39
GTF2H3-213ENST00000543415 EFSO43281 561 aa6.38□□□□□ -1.39
GTF2H3-213ENST00000543415 RASA1P20936 1047 aa6.38□□□□□ -1.39
GTF2H3-213ENST00000543415 SH3PXD2AQ5TCZ1 1133 aa6.38□□□□□ -1.39
GTF2H3-213ENST00000543415 FCHSD1Q86WN1 690 aa6.38□□□□□ -1.39
GTF2H3-213ENST00000543415 SLC9A9Q8IVB4 645 aa6.38□□□□□ -1.39
GTF2H3-213ENST00000543415 TSEN2Q8NCE0 465 aaKnown RBP6.38□□□□□ -1.39
GTF2H3-213ENST00000543415 L3MBTL2Q969R5 705 aa6.38□□□□□ -1.39
GTF2H3-213ENST00000543415 NEUROD4Q9HD90 331 aa6.38□□□□□ -1.39
GTF2H3-213ENST00000543415 KLF15Q9UIH9 416 aa6.38□□□□□ -1.39
GTF2H3-213ENST00000543415 NOS2P35228 1153 aa6.37□□□□□ -1.39
GTF2H3-213ENST00000543415 PTK7Q13308 1070 aa6.37□□□□□ -1.39
GTF2H3-213ENST00000543415 TSPAN10Q9H1Z9 355 aaPredicted RBP6.37□□□□□ -1.39
GTF2H3-213ENST00000543415 HCN2Q9UL51 889 aa6.37□□□□□ -1.39
GTF2H3-213ENST00000543415 EML1O00423 815 aa6.36□□□□□ -1.39
GTF2H3-213ENST00000543415 ALAS2P22557 587 aa6.36□□□□□ -1.39
GTF2H3-213ENST00000543415 TXLNAP40222 546 aa6.36□□□□□ -1.39
GTF2H3-213ENST00000543415 PCBP4P57723 403 aaKnown RBP6.36□□□□□ -1.39
GTF2H3-213ENST00000543415 ZNF232Q9UNY5 417 aa6.36□□□□□ -1.39
GTF2H3-213ENST00000543415 ELOA3CA0A087WX78 387 aaPredicted RBP6.35□□□□□ -1.39
GTF2H3-213ENST00000543415 SERTM1A2A2V5 107 aa6.35□□□□□ -1.39
GTF2H3-213ENST00000543415 ELOA3DA6NLF2 546 aaPredicted RBP6.35□□□□□ -1.39
GTF2H3-213ENST00000543415 C1QTNF9BB2RNN3 333 aa6.35□□□□□ -1.39
GTF2H3-213ENST00000543415 USP17L15C9J2P7 530 aa6.35□□□□□ -1.39
GTF2H3-213ENST00000543415 USP17L10C9JJH3 530 aa6.35□□□□□ -1.39
GTF2H3-213ENST00000543415 USP17L13C9JLJ4 530 aa6.35□□□□□ -1.39
GTF2H3-213ENST00000543415 USP17L12C9JPN9 530 aa6.35□□□□□ -1.39
GTF2H3-213ENST00000543415 USP17L11C9JVI0 530 aa6.35□□□□□ -1.39
GTF2H3-213ENST00000543415 USP17L21D6R901 530 aa6.35□□□□□ -1.39
GTF2H3-213ENST00000543415 USP17L18D6R9N7 530 aa6.35□□□□□ -1.39
GTF2H3-213ENST00000543415 USP17L22D6RA61 530 aa6.35□□□□□ -1.39
GTF2H3-213ENST00000543415 USP17L17D6RBQ6 530 aa6.35□□□□□ -1.39
GTF2H3-213ENST00000543415 USP17L19D6RCP7 530 aa6.35□□□□□ -1.39
GTF2H3-213ENST00000543415 USP17L20D6RJB6 530 aa6.35□□□□□ -1.39
GTF2H3-213ENST00000543415 M0R2N6 131 aa6.35□□□□□ -1.39
GTF2H3-213ENST00000543415 LGR5O75473 907 aa6.35□□□□□ -1.39
GTF2H3-213ENST00000543415 USP17L24Q0WX57 530 aa6.35□□□□□ -1.39
GTF2H3-213ENST00000543415 ELOA3BQ3SY89 546 aa6.35□□□□□ -1.39
GTF2H3-213ENST00000543415 ELOA3Q8NG57 546 aa6.35□□□□□ -1.39
GTF2H3-213ENST00000543415 USTQ9Y2C2 406 aa6.35□□□□□ -1.39
GTF2H3-213ENST00000543415 CHMP3Q9Y3E7 222 aa6.35□□□□□ -1.39
GTF2H3-213ENST00000543415 SPDYE3A6NKU9 549 aa6.34□□□□□ -1.39
GTF2H3-213ENST00000543415 C21orf2O43822 256 aa6.34□□□□□ -1.39
GTF2H3-213ENST00000543415 DPYDQ12882 1025 aa6.34□□□□□ -1.39
GTF2H3-213ENST00000543415 LRRC69Q6ZNQ3 347 aa6.34□□□□□ -1.39
GTF2H3-213ENST00000543415 CD163Q86VB7 1156 aa6.34□□□□□ -1.39
GTF2H3-213ENST00000543415 STRN4Q9NRL3 753 aa6.34□□□□□ -1.39
GTF2H3-213ENST00000543415 FAM196BA6NMK8 535 aa6.33□□□□□ -1.4
GTF2H3-213ENST00000543415 PATL2C9JE40 543 aaKnown RBP6.33□□□□□ -1.4
GTF2H3-213ENST00000543415 SIN3BO75182 1162 aa6.33□□□□□ -1.4
GTF2H3-213ENST00000543415 FURINP09958 794 aa6.33□□□□□ -1.4
GTF2H3-213ENST00000543415 SPATA31C1P0DKV0 1188 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms