RNA–Protein interactions for RNA: ENST00000543199.5

GPN3-203, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5 BASIC

Gene GPN3, Length 1,604 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-203ENST00000543199 USP16Q9Y5T5 823 aa17.1■□□□□ 0.33
GPN3-203ENST00000543199 COL11A2P13942 1736 aaPredicted RBP17.1■□□□□ 0.33
GPN3-203ENST00000543199 TIAM2Q8IVF5 1701 aa17.1■□□□□ 0.33
GPN3-203ENST00000543199 PPP2R1AP30153 589 aa17.09■□□□□ 0.33
GPN3-203ENST00000543199 SMC1BQ8NDV3 1235 aa17.09■□□□□ 0.33
GPN3-203ENST00000543199 DCTN1Q14203 1278 aa17.08■□□□□ 0.32
GPN3-203ENST00000543199 ST5P78524 1137 aa17.07■□□□□ 0.32
GPN3-203ENST00000543199 CCDC88AQ3V6T2 1871 aa17.07■□□□□ 0.32
GPN3-203ENST00000543199 PDZRN3Q9UPQ7 1066 aa17.07■□□□□ 0.32
GPN3-203ENST00000543199 BCORQ6W2J9 1755 aa17.07■□□□□ 0.32
GPN3-203ENST00000543199 VEGFAP15692 232 aaPredicted RBP17.07■□□□□ 0.32
GPN3-203ENST00000543199 KLRG1Q96E93 195 aa17.07■□□□□ 0.32
GPN3-203ENST00000543199 PCNTO95613 3336 aa17.06■□□□□ 0.32
GPN3-203ENST00000543199 SNRPA1P09661 255 aaKnown RBP17.06■□□□□ 0.32
GPN3-203ENST00000543199 ERFEQ4G0M1 354 aa17.05■□□□□ 0.32
GPN3-203ENST00000543199 PRPF40BQ6NWY9 871 aaKnown RBP17.04■□□□□ 0.32
GPN3-203ENST00000543199 NBPF5PQ86XG9 351 aaPredicted RBP17.04■□□□□ 0.32
GPN3-203ENST00000543199 CNKSR1Q969H4 720 aa17.04■□□□□ 0.32
GPN3-203ENST00000543199 TAOK3Q9H2K8 898 aa17.04■□□□□ 0.32
GPN3-203ENST00000543199 SRGNP10124 158 aa17.03■□□□□ 0.32
GPN3-203ENST00000543199 DPY19L2Q6NUT2 758 aa17.03■□□□□ 0.32
GPN3-203ENST00000543199 CACNA1SQ13698 1873 aa17.03■□□□□ 0.32
GPN3-203ENST00000543199 FER1L6Q2WGJ9 1857 aa17.03■□□□□ 0.32
GPN3-203ENST00000543199 STYK1Q6J9G0 422 aa17.03■□□□□ 0.32
GPN3-203ENST00000543199 MASTLQ96GX5 879 aa17.03■□□□□ 0.32
GPN3-203ENST00000543199 ZNF652Q9Y2D9 606 aa17.03■□□□□ 0.32
GPN3-203ENST00000543199 SLX4Q8IY92 1834 aa17.03■□□□□ 0.32
GPN3-203ENST00000543199 POTECB2RU33 542 aa17.02■□□□□ 0.31
GPN3-203ENST00000543199 NBPF26B4DH59 902 aa17.02■□□□□ 0.31
GPN3-203ENST00000543199 NBPF10Q6P3W6 841 aaKnown RBP17.02■□□□□ 0.31
GPN3-203ENST00000543199 CLEC4GQ6UXB4 293 aa17.02■□□□□ 0.31
GPN3-203ENST00000543199 NBPF15Q8N660 670 aa17.02■□□□□ 0.31
GPN3-203ENST00000543199 MIS18AQ9NYP9 233 aa17.02■□□□□ 0.31
GPN3-203ENST00000543199 JMYQ8N9B5 988 aa17.01■□□□□ 0.31
GPN3-203ENST00000543199 NIP7Q9Y221 180 aaKnown RBP eCLIP17.01■□□□□ 0.31
GPN3-203ENST00000543199 LTBP3Q9NS15 1303 aa17■□□□□ 0.31
GPN3-203ENST00000543199 FAM177BA6PVY3 158 aa17■□□□□ 0.31
GPN3-203ENST00000543199 HTATSF1O43719 755 aaKnown RBP17■□□□□ 0.31
GPN3-203ENST00000543199 TAF7Q15545 349 aaPredicted RBP16.99■□□□□ 0.31
GPN3-203ENST00000543199 SOGA3Q5TF21 947 aa16.99■□□□□ 0.31
GPN3-203ENST00000543199 DICER1Q9UPY3 1922 aaKnown RBP16.99■□□□□ 0.31
GPN3-203ENST00000543199 DDNO94850 711 aaPredicted RBP16.98■□□□□ 0.31
GPN3-203ENST00000543199 NEFMP07197 916 aa16.98■□□□□ 0.31
GPN3-203ENST00000543199 HLFQ16534 295 aa16.98■□□□□ 0.31
GPN3-203ENST00000543199 TPTE2Q6XPS3 522 aa16.98■□□□□ 0.31
GPN3-203ENST00000543199 ARFGEF2Q9Y6D5 1785 aa16.98■□□□□ 0.31
GPN3-203ENST00000543199 NPR1P16066 1061 aa16.97■□□□□ 0.31
GPN3-203ENST00000543199 NGEFQ8N5V2 710 aa16.97■□□□□ 0.31
GPN3-203ENST00000543199 CCDC93Q567U6 631 aa16.96■□□□□ 0.31
GPN3-203ENST00000543199 OLFM4Q6UX06 510 aa16.96■□□□□ 0.31
GPN3-203ENST00000543199 C7orf43Q8WVR3 580 aa16.96■□□□□ 0.31
GPN3-203ENST00000543199 POTEIP0CG38 1075 aa16.96■□□□□ 0.3
GPN3-203ENST00000543199 POTEJP0CG39 1038 aa16.96■□□□□ 0.3
GPN3-203ENST00000543199 LAMB4A4D0S4 1761 aa16.95■□□□□ 0.3
GPN3-203ENST00000543199 KLRG2A4D1S0 409 aaPredicted RBP16.95■□□□□ 0.3
GPN3-203ENST00000543199 GTF2E1P29083 439 aaPredicted RBP16.95■□□□□ 0.3
GPN3-203ENST00000543199 COL13A1Q5TAT6 717 aaPredicted RBP16.95■□□□□ 0.3
GPN3-203ENST00000543199 THUMPD2Q9BTF0 503 aaKnown RBP16.95■□□□□ 0.3
GPN3-203ENST00000543199 DLG5Q8TDM6 1919 aa16.94■□□□□ 0.3
GPN3-203ENST00000543199 RGL2O15211 777 aa16.94■□□□□ 0.3
GPN3-203ENST00000543199 ZNF277Q9NRM2 450 aaPredicted RBP16.94■□□□□ 0.3
GPN3-203ENST00000543199 PLEKHF1Q96S99 279 aa16.93■□□□□ 0.3
GPN3-203ENST00000543199 RRP7AQ9Y3A4 280 aaKnown RBP16.93■□□□□ 0.3
GPN3-203ENST00000543199 KDM3BQ7LBC6 1761 aa16.92■□□□□ 0.3
GPN3-203ENST00000543199 FKBP4Q02790 459 aaKnown RBP eCLIP16.92■□□□□ 0.3
GPN3-203ENST00000543199 CHADLQ6NUI6 762 aa16.92■□□□□ 0.3
GPN3-203ENST00000543199 NUTM1Q86Y26 1132 aa16.92■□□□□ 0.3
GPN3-203ENST00000543199 PNISRQ8TF01 805 aaKnown RBP16.92■□□□□ 0.3
GPN3-203ENST00000543199 MYL6BP14649 208 aa16.92■□□□□ 0.3
GPN3-203ENST00000543199 EIF4A1P60842 406 aaKnown RBP16.92■□□□□ 0.3
GPN3-203ENST00000543199 NFE2L2Q16236 605 aa16.92■□□□□ 0.3
GPN3-203ENST00000543199 ABCC12Q96J65 1359 aa16.92■□□□□ 0.3
GPN3-203ENST00000543199 ZNF541Q9H0D2 1346 aa16.91■□□□□ 0.3
GPN3-203ENST00000543199 TTLL7Q6ZT98 887 aa16.91■□□□□ 0.3
GPN3-203ENST00000543199 MAP3K15Q6ZN16 1313 aa16.9■□□□□ 0.3
GPN3-203ENST00000543199 MAPK8IP3Q9UPT6 1336 aa16.9■□□□□ 0.3
GPN3-203ENST00000543199 IQCA1LA6NCM1 817 aa16.9■□□□□ 0.3
GPN3-203ENST00000543199 GPTP24298 496 aa16.9■□□□□ 0.3
GPN3-203ENST00000543199 ALDH1B1P30837 517 aa16.9■□□□□ 0.3
GPN3-203ENST00000543199 KIF6Q6ZMV9 814 aa16.9■□□□□ 0.3
GPN3-203ENST00000543199 RTKN2Q8IZC4 609 aa16.9■□□□□ 0.3
GPN3-203ENST00000543199 NYXQ9GZU5 481 aa16.9■□□□□ 0.3
GPN3-203ENST00000543199 ZBTB3Q9H5J0 574 aa16.9■□□□□ 0.3
GPN3-203ENST00000543199 ERVV-1B6SEH8 477 aa16.89■□□□□ 0.29
GPN3-203ENST00000543199 HSPA1AP0DMV8 641 aaKnown RBP16.89■□□□□ 0.29
GPN3-203ENST00000543199 HSPA1BP0DMV9 641 aaKnown RBP16.89■□□□□ 0.29
GPN3-203ENST00000543199 L3MBTL3Q96JM7 780 aaPredicted RBP16.89■□□□□ 0.29
GPN3-203ENST00000543199 TAF1DQ9H5J8 278 aaPredicted RBP16.88■□□□□ 0.29
GPN3-203ENST00000543199 UBN2Q6ZU65 1347 aa16.88■□□□□ 0.29
GPN3-203ENST00000543199 NUP98P52948 1817 aa16.88■□□□□ 0.29
GPN3-203ENST00000543199 IARSP41252 1262 aaKnown RBP16.88■□□□□ 0.29
GPN3-203ENST00000543199 CRY2Q49AN0 593 aa16.88■□□□□ 0.29
GPN3-203ENST00000543199 EAPPQ56P03 285 aaPredicted RBP16.88■□□□□ 0.29
GPN3-203ENST00000543199 CREBZFQ9NS37 354 aa16.88■□□□□ 0.29
GPN3-203ENST00000543199 MKRN1Q9UHC7 482 aaKnown RBP16.88■□□□□ 0.29
GPN3-203ENST00000543199 LDHDQ86WU2 507 aa16.87■□□□□ 0.29
GPN3-203ENST00000543199 SYNE4Q8N205 404 aa16.87■□□□□ 0.29
GPN3-203ENST00000543199 RPGRQ92834 1020 aaKnown RBP16.87■□□□□ 0.29
GPN3-203ENST00000543199 PNNQ9H307 717 aaKnown RBP16.87■□□□□ 0.29
GPN3-203ENST00000543199 RNF123Q5XPI4 1314 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms