RNA–Protein interactions for RNA: ENST00000543079.1

PAAF1-212, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-212ENST00000543079 USP4Q13107 963 aa10.46□□□□□ -0.73
PAAF1-212ENST00000543079 WDR44Q5JSH3 913 aa10.46□□□□□ -0.73
PAAF1-212ENST00000543079 GMCL1Q96IK5 515 aa10.46□□□□□ -0.73
PAAF1-212ENST00000543079 ESYT1Q9BSJ8 1104 aa10.46□□□□□ -0.73
PAAF1-212ENST00000543079 CUEDC1Q9NWM3 386 aaPredicted RBP10.46□□□□□ -0.73
PAAF1-212ENST00000543079 MYOM3Q5VTT5 1437 aa10.46□□□□□ -0.74
PAAF1-212ENST00000543079 A2ML1A8K2U0 1454 aa10.46□□□□□ -0.74
PAAF1-212ENST00000543079 ARHGAP5Q13017 1502 aa10.46□□□□□ -0.74
PAAF1-212ENST00000543079 CDC42BPAQ5VT25 1732 aa10.45□□□□□ -0.74
PAAF1-212ENST00000543079 MYO3AQ8NEV4 1616 aa10.45□□□□□ -0.74
PAAF1-212ENST00000543079 VWDEQ8N2E2 1590 aa10.45□□□□□ -0.74
PAAF1-212ENST00000543079 RNF135Q8IUD6 432 aa10.45□□□□□ -0.74
PAAF1-212ENST00000543079 CNKSR1Q969H4 720 aa10.45□□□□□ -0.74
PAAF1-212ENST00000543079 RAB6BQ9NRW1 208 aa10.45□□□□□ -0.74
PAAF1-212ENST00000543079 CFDP1Q9UEE9 299 aaPredicted RBP10.45□□□□□ -0.74
PAAF1-212ENST00000543079 DOLKQ9UPQ8 538 aa10.45□□□□□ -0.74
PAAF1-212ENST00000543079 DYRK1BQ9Y463 629 aa10.45□□□□□ -0.74
PAAF1-212ENST00000543079 PREX2Q70Z35 1606 aa10.44□□□□□ -0.74
PAAF1-212ENST00000543079 LRRC7Q96NW7 1537 aa10.44□□□□□ -0.74
PAAF1-212ENST00000543079 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.44□□□□□ -0.74
PAAF1-212ENST00000543079 ZNF644Q9H582 1327 aaPredicted RBP10.44□□□□□ -0.74
PAAF1-212ENST00000543079 IL2RAP01589 272 aa10.44□□□□□ -0.74
PAAF1-212ENST00000543079 NBPF10Q6P3W6 841 aaKnown RBP10.44□□□□□ -0.74
PAAF1-212ENST00000543079 NBPF15Q8N660 670 aa10.44□□□□□ -0.74
PAAF1-212ENST00000543079 XAGE2Q96GT9 111 aa10.44□□□□□ -0.74
PAAF1-212ENST00000543079 CDC42BPBQ9Y5S2 1711 aa10.44□□□□□ -0.74
PAAF1-212ENST00000543079 ZNF142P52746 1687 aaPredicted RBP10.44□□□□□ -0.74
PAAF1-212ENST00000543079 SOX11P35716 441 aa10.43□□□□□ -0.74
PAAF1-212ENST00000543079 CENPCQ03188 943 aa10.43□□□□□ -0.74
PAAF1-212ENST00000543079 TRIM22Q8IYM9 498 aa10.43□□□□□ -0.74
PAAF1-212ENST00000543079 THEMISQ8N1K5 641 aaPredicted RBP10.43□□□□□ -0.74
PAAF1-212ENST00000543079 HRH3Q9Y5N1 445 aa10.43□□□□□ -0.74
PAAF1-212ENST00000543079 SETD1AO15047 1707 aaKnown RBP10.43□□□□□ -0.74
PAAF1-212ENST00000543079 MYO5CQ9NQX4 1742 aa10.43□□□□□ -0.74
PAAF1-212ENST00000543079 MROH2AA6NES4 1674 aa10.43□□□□□ -0.74
PAAF1-212ENST00000543079 DNMT1P26358 1616 aaKnown RBP10.43□□□□□ -0.74
PAAF1-212ENST00000543079 NEURL4Q96JN8 1562 aa10.43□□□□□ -0.74
PAAF1-212ENST00000543079 NPHP4O75161 1426 aaPredicted RBP10.42□□□□□ -0.74
PAAF1-212ENST00000543079 FGD6Q6ZV73 1430 aa10.42□□□□□ -0.74
PAAF1-212ENST00000543079 MIA2Q96PC5 1412 aa10.42□□□□□ -0.74
PAAF1-212ENST00000543079 SLURP2P0DP57 97 aa10.42□□□□□ -0.74
PAAF1-212ENST00000543079 SEMA3FQ13275 785 aa10.42□□□□□ -0.74
PAAF1-212ENST00000543079 SIRT1Q96EB6 747 aa10.42□□□□□ -0.74
PAAF1-212ENST00000543079 COG6Q9Y2V7 657 aa10.42□□□□□ -0.74
PAAF1-212ENST00000543079 DBN1Q16643 649 aa10.41□□□□□ -0.74
PAAF1-212ENST00000543079 MAP7D1Q3KQU3 841 aa10.41□□□□□ -0.74
PAAF1-212ENST00000543079 ESCO1Q5FWF5 840 aa10.41□□□□□ -0.74
PAAF1-212ENST00000543079 TAS1R3Q7RTX0 852 aa10.41□□□□□ -0.74
PAAF1-212ENST00000543079 ITSN2Q9NZM3 1697 aa10.41□□□□□ -0.74
PAAF1-212ENST00000543079 SAMD9LQ8IVG5 1584 aa10.4□□□□□ -0.74
PAAF1-212ENST00000543079 SPAG9O60271 1321 aaKnown RBP10.4□□□□□ -0.74
PAAF1-212ENST00000543079 H7C1W4 665 aa10.4□□□□□ -0.74
PAAF1-212ENST00000543079 WASLO00401 505 aaPredicted RBP10.4□□□□□ -0.74
PAAF1-212ENST00000543079 ZNF837Q96EG3 531 aaPredicted RBP10.4□□□□□ -0.74
PAAF1-212ENST00000543079 ZNF777Q9ULD5 760 aaPredicted RBP10.4□□□□□ -0.74
PAAF1-212ENST00000543079 FAM135BQ49AJ0 1406 aa10.4□□□□□ -0.75
PAAF1-212ENST00000543079 RRBP1Q9P2E9 1410 aaKnown RBP10.4□□□□□ -0.75
PAAF1-212ENST00000543079 TNRQ92752 1358 aa10.39□□□□□ -0.75
PAAF1-212ENST00000543079 CLTCQ00610 1675 aaKnown RBP10.39□□□□□ -0.75
PAAF1-212ENST00000543079 HNRNPMP52272 730 aaKnown RBP eCLIP10.39□□□□□ -0.75
PAAF1-212ENST00000543079 OXLD1Q5BKU9 147 aa10.39□□□□□ -0.75
PAAF1-212ENST00000543079 RIPOR1Q6ZS17 1223 aa10.39□□□□□ -0.75
PAAF1-212ENST00000543079 ZSCAN10Q96SZ4 725 aaPredicted RBP10.39□□□□□ -0.75
PAAF1-212ENST00000543079 GAS2L1Q99501 681 aaPredicted RBP10.39□□□□□ -0.75
PAAF1-212ENST00000543079 FHDC1Q9C0D6 1143 aaPredicted RBP10.39□□□□□ -0.75
PAAF1-212ENST00000543079 TIMMDC1Q9NPL8 285 aa10.39□□□□□ -0.75
PAAF1-212ENST00000543079 KIAA1107Q9UPP5 1409 aa10.39□□□□□ -0.75
PAAF1-212ENST00000543079 CAMSAP2Q08AD1 1489 aa10.38□□□□□ -0.75
PAAF1-212ENST00000543079 MBD5Q9P267 1494 aa10.38□□□□□ -0.75
PAAF1-212ENST00000543079 ZNF385CQ66K41 422 aaPredicted RBP10.38□□□□□ -0.75
PAAF1-212ENST00000543079 FOXR1Q6PIV2 292 aa10.38□□□□□ -0.75
PAAF1-212ENST00000543079 KIDINS220Q9ULH0 1771 aa10.38□□□□□ -0.75
PAAF1-212ENST00000543079 ABCC1P33527 1531 aa10.38□□□□□ -0.75
PAAF1-212ENST00000543079 MED14O60244 1454 aa10.37□□□□□ -0.75
PAAF1-212ENST00000543079 PTPN23Q9H3S7 1636 aa10.37□□□□□ -0.75
PAAF1-212ENST00000543079 SRSF11Q05519 484 aaKnown RBP10.37□□□□□ -0.75
PAAF1-212ENST00000543079 GAS6Q14393 721 aa10.37□□□□□ -0.75
PAAF1-212ENST00000543079 F11P03951 625 aa10.36□□□□□ -0.75
PAAF1-212ENST00000543079 ZNF772Q68DY9 489 aaPredicted RBP10.36□□□□□ -0.75
PAAF1-212ENST00000543079 PLPP7Q8NBV4 271 aa10.36□□□□□ -0.75
PAAF1-212ENST00000543079 ETNK1Q9HBU6 452 aa10.36□□□□□ -0.75
PAAF1-212ENST00000543079 PLEKHH2Q8IVE3 1493 aa10.36□□□□□ -0.75
PAAF1-212ENST00000543079 SYCP2Q9BX26 1530 aa10.35□□□□□ -0.75
PAAF1-212ENST00000543079 ADAMTS2O95450 1211 aa10.35□□□□□ -0.75
PAAF1-212ENST00000543079 RXRBP28702 533 aa10.35□□□□□ -0.75
PAAF1-212ENST00000543079 GTF2E1P29083 439 aaPredicted RBP10.35□□□□□ -0.75
PAAF1-212ENST00000543079 FLIIQ13045 1269 aa10.35□□□□□ -0.75
PAAF1-212ENST00000543079 WWC1Q8IX03 1113 aa10.35□□□□□ -0.75
PAAF1-212ENST00000543079 ADAMTS8Q9UP79 889 aa10.35□□□□□ -0.75
PAAF1-212ENST00000543079 RNF17Q9BXT8 1623 aaKnown RBP10.35□□□□□ -0.75
PAAF1-212ENST00000543079 A2MP01023 1474 aa10.35□□□□□ -0.75
PAAF1-212ENST00000543079 FAM50AQ14320 339 aaKnown RBP10.34□□□□□ -0.75
PAAF1-212ENST00000543079 GNASQ5JWF2 1037 aa10.34□□□□□ -0.75
PAAF1-212ENST00000543079 TMEM214Q6NUQ4 689 aaKnown RBP10.34□□□□□ -0.75
PAAF1-212ENST00000543079 SVOPQ8N4V2 548 aa10.34□□□□□ -0.75
PAAF1-212ENST00000543079 WHAMMQ8TF30 809 aa10.34□□□□□ -0.75
PAAF1-212ENST00000543079 GTPBP3Q969Y2 492 aaKnown RBP10.34□□□□□ -0.75
PAAF1-212ENST00000543079 ALG2Q9H553 416 aa10.34□□□□□ -0.75
PAAF1-212ENST00000543079 STRCP1A6NGW2 1772 aa10.34□□□□□ -0.75
PAAF1-212ENST00000543079 ABCC5O15440 1437 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms