RNA–Protein interactions for RNA: ENST00000542791.1

MRPS35-205, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-205ENST00000542791 ARFGEF1Q9Y6D6 1849 aa10.36□□□□□ -0.75
MRPS35-205ENST00000542791 RALBP1Q15311 655 aa10.36□□□□□ -0.75
MRPS35-205ENST00000542791 NFE2L2Q16236 605 aa10.36□□□□□ -0.75
MRPS35-205ENST00000542791 PRR5LQ6MZQ0 368 aa10.36□□□□□ -0.75
MRPS35-205ENST00000542791 BRIP1Q9BX63 1249 aa10.36□□□□□ -0.75
MRPS35-205ENST00000542791 AFDNP55196 1824 aaKnown RBP10.35□□□□□ -0.75
MRPS35-205ENST00000542791 NBPF26B4DH59 902 aa10.35□□□□□ -0.75
MRPS35-205ENST00000542791 H0YIN7 160 aa10.35□□□□□ -0.75
MRPS35-205ENST00000542791 RGL2O15211 777 aa10.35□□□□□ -0.75
MRPS35-205ENST00000542791 PIP4K2AP48426 406 aaPredicted RBP10.35□□□□□ -0.75
MRPS35-205ENST00000542791 NBPF10Q6P3W6 841 aaKnown RBP10.35□□□□□ -0.75
MRPS35-205ENST00000542791 CLEC4GQ6UXB4 293 aa10.35□□□□□ -0.75
MRPS35-205ENST00000542791 NPM2Q86SE8 214 aaKnown RBP10.35□□□□□ -0.75
MRPS35-205ENST00000542791 DZIP3Q86Y13 1208 aaKnown RBP10.35□□□□□ -0.75
MRPS35-205ENST00000542791 C2CD5Q86YS7 1000 aa10.35□□□□□ -0.75
MRPS35-205ENST00000542791 NBPF15Q8N660 670 aa10.35□□□□□ -0.75
MRPS35-205ENST00000542791 TTLL6Q8N841 843 aa10.35□□□□□ -0.75
MRPS35-205ENST00000542791 MIS18AQ9NYP9 233 aa10.35□□□□□ -0.75
MRPS35-205ENST00000542791 PDZRN3Q9UPQ7 1066 aa10.35□□□□□ -0.75
MRPS35-205ENST00000542791 NEFMP07197 916 aa10.34□□□□□ -0.75
MRPS35-205ENST00000542791 PDE6BP35913 854 aa10.34□□□□□ -0.75
MRPS35-205ENST00000542791 CNBD1Q8NA66 436 aa10.34□□□□□ -0.75
MRPS35-205ENST00000542791 PNISRQ8TF01 805 aaKnown RBP10.34□□□□□ -0.75
MRPS35-205ENST00000542791 SETDB2Q96T68 719 aa10.34□□□□□ -0.75
MRPS35-205ENST00000542791 PNNQ9H307 717 aaKnown RBP10.34□□□□□ -0.75
MRPS35-205ENST00000542791 HSPA6P17066 643 aa10.33□□□□□ -0.76
MRPS35-205ENST00000542791 RASSF7Q02833 373 aa10.33□□□□□ -0.76
MRPS35-205ENST00000542791 THUMPD2Q9BTF0 503 aaKnown RBP10.33□□□□□ -0.76
MRPS35-205ENST00000542791 NMRK2Q9NPI5 230 aa10.33□□□□□ -0.76
MRPS35-205ENST00000542791 RNF181Q9P0P0 153 aa10.33□□□□□ -0.76
MRPS35-205ENST00000542791 MAPK8IP3Q9UPT6 1336 aa10.33□□□□□ -0.76
MRPS35-205ENST00000542791 ZC3H4Q9UPT8 1303 aaKnown RBP10.33□□□□□ -0.76
MRPS35-205ENST00000542791 NFKBIEO00221 500 aa10.32□□□□□ -0.76
MRPS35-205ENST00000542791 PRELPP51888 382 aa10.32□□□□□ -0.76
MRPS35-205ENST00000542791 EIF4A1P60842 406 aaKnown RBP10.32□□□□□ -0.76
MRPS35-205ENST00000542791 CCDC24Q8N4L8 307 aa10.32□□□□□ -0.76
MRPS35-205ENST00000542791 ZNF652Q9Y2D9 606 aa10.32□□□□□ -0.76
MRPS35-205ENST00000542791 DLEC1Q9Y238 1755 aa10.31□□□□□ -0.76
MRPS35-205ENST00000542791 KLRG2A4D1S0 409 aaPredicted RBP10.31□□□□□ -0.76
MRPS35-205ENST00000542791 TOMM70O94826 608 aa10.31□□□□□ -0.76
MRPS35-205ENST00000542791 SRGNP10124 158 aa10.31□□□□□ -0.76
MRPS35-205ENST00000542791 LMNB1P20700 586 aa10.31□□□□□ -0.76
MRPS35-205ENST00000542791 ST5P78524 1137 aa10.31□□□□□ -0.76
MRPS35-205ENST00000542791 DDX10Q13206 875 aaKnown RBP10.31□□□□□ -0.76
MRPS35-205ENST00000542791 BCORQ6W2J9 1755 aa10.31□□□□□ -0.76
MRPS35-205ENST00000542791 MYBBP1AQ9BQG0 1328 aaKnown RBP10.31□□□□□ -0.76
MRPS35-205ENST00000542791 ANKRD31Q8N7Z5 1873 aa10.3□□□□□ -0.76
MRPS35-205ENST00000542791 HLFQ16534 295 aa10.3□□□□□ -0.76
MRPS35-205ENST00000542791 STYK1Q6J9G0 422 aa10.3□□□□□ -0.76
MRPS35-205ENST00000542791 NBPF5PQ86XG9 351 aaPredicted RBP10.3□□□□□ -0.76
MRPS35-205ENST00000542791 ZNF622Q969S3 477 aaKnown RBP eCLIP10.3□□□□□ -0.76
MRPS35-205ENST00000542791 KDM2BQ8NHM5 1336 aa10.3□□□□□ -0.76
MRPS35-205ENST00000542791 ERVV-1B6SEH8 477 aa10.29□□□□□ -0.76
MRPS35-205ENST00000542791 TMPOP42166 694 aaKnown RBP10.29□□□□□ -0.76
MRPS35-205ENST00000542791 RIPK4P57078 832 aa10.29□□□□□ -0.76
MRPS35-205ENST00000542791 PRPF40BQ6NWY9 871 aaKnown RBP10.29□□□□□ -0.76
MRPS35-205ENST00000542791 RBM46Q8TBY0 533 aaKnown RBP10.29□□□□□ -0.76
MRPS35-205ENST00000542791 CNKSR1Q969H4 720 aa10.29□□□□□ -0.76
MRPS35-205ENST00000542791 MASTLQ96GX5 879 aa10.29□□□□□ -0.76
MRPS35-205ENST00000542791 BABAM1Q9NWV8 329 aa10.29□□□□□ -0.76
MRPS35-205ENST00000542791 NIP7Q9Y221 180 aaKnown RBP eCLIP10.29□□□□□ -0.76
MRPS35-205ENST00000542791 ERBB4Q15303 1308 aa10.29□□□□□ -0.76
MRPS35-205ENST00000542791 LTBP3Q9NS15 1303 aa10.29□□□□□ -0.76
MRPS35-205ENST00000542791 KDM3BQ7LBC6 1761 aa10.29□□□□□ -0.76
MRPS35-205ENST00000542791 COL11A2P13942 1736 aaPredicted RBP10.28□□□□□ -0.76
MRPS35-205ENST00000542791 NPHP1O15259 732 aa10.28□□□□□ -0.76
MRPS35-205ENST00000542791 C21orf2O43822 256 aa10.28□□□□□ -0.76
MRPS35-205ENST00000542791 CHADLQ6NUI6 762 aa10.28□□□□□ -0.76
MRPS35-205ENST00000542791 TPTE2Q6XPS3 522 aa10.28□□□□□ -0.76
MRPS35-205ENST00000542791 LRP10Q7Z4F1 713 aa10.28□□□□□ -0.76
MRPS35-205ENST00000542791 C7orf43Q8WVR3 580 aa10.28□□□□□ -0.76
MRPS35-205ENST00000542791 TSPYL4Q9UJ04 414 aa10.28□□□□□ -0.76
MRPS35-205ENST00000542791 MAP3K15Q6ZN16 1313 aa10.28□□□□□ -0.76
MRPS35-205ENST00000542791 SBF1O95248 1867 aa10.27□□□□□ -0.76
MRPS35-205ENST00000542791 DLG5Q8TDM6 1919 aa10.27□□□□□ -0.76
MRPS35-205ENST00000542791 GLTPD2A6NH11 291 aa10.27□□□□□ -0.77
MRPS35-205ENST00000542791 NPR1P16066 1061 aa10.27□□□□□ -0.77
MRPS35-205ENST00000542791 LMOD3Q0VAK6 560 aa10.27□□□□□ -0.77
MRPS35-205ENST00000542791 TTLL7Q6ZT98 887 aa10.27□□□□□ -0.77
MRPS35-205ENST00000542791 TAOK3Q9H2K8 898 aa10.27□□□□□ -0.77
MRPS35-205ENST00000542791 IBTKQ9P2D0 1353 aaPredicted RBP10.26□□□□□ -0.77
MRPS35-205ENST00000542791 LAMB4A4D0S4 1761 aa10.26□□□□□ -0.77
MRPS35-205ENST00000542791 MYL6BP14649 208 aa10.26□□□□□ -0.77
MRPS35-205ENST00000542791 APLP1P51693 650 aa10.26□□□□□ -0.77
MRPS35-205ENST00000542791 PDIA6Q15084 440 aa10.26□□□□□ -0.77
MRPS35-205ENST00000542791 CRY2Q49AN0 593 aa10.26□□□□□ -0.77
MRPS35-205ENST00000542791 SOGA3Q5TF21 947 aa10.26□□□□□ -0.77
MRPS35-205ENST00000542791 KIF6Q6ZMV9 814 aa10.26□□□□□ -0.77
MRPS35-205ENST00000542791 NGEFQ8N5V2 710 aa10.26□□□□□ -0.77
MRPS35-205ENST00000542791 RRAGCQ9HB90 399 aa10.26□□□□□ -0.77
MRPS35-205ENST00000542791 RRP7AQ9Y3A4 280 aaKnown RBP10.26□□□□□ -0.77
MRPS35-205ENST00000542791 ABCC12Q96J65 1359 aa10.26□□□□□ -0.77
MRPS35-205ENST00000542791 FSTL1Q12841 308 aa10.25□□□□□ -0.77
MRPS35-205ENST00000542791 CCDC146Q8IYE0 955 aa10.25□□□□□ -0.77
MRPS35-205ENST00000542791 C16orf71Q8IYS4 520 aaPredicted RBP10.25□□□□□ -0.77
MRPS35-205ENST00000542791 RUNDC1Q96C34 613 aa10.25□□□□□ -0.77
MRPS35-205ENST00000542791 NYXQ9GZU5 481 aa10.25□□□□□ -0.77
MRPS35-205ENST00000542791 PRKRIP1Q9H875 184 aaPredicted RBP10.25□□□□□ -0.77
MRPS35-205ENST00000542791 TRIM35Q9UPQ4 493 aa10.25□□□□□ -0.77
MRPS35-205ENST00000542791 UBN2Q6ZU65 1347 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms