RNA–Protein interactions for RNA: ENST00000542680.1

CACNA1C-IT3-201, CACNA1C intronic transcript 3, humanhuman

TSL 3 BASIC

Gene CACNA1C-IT3, Length 622 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT3-201ENST00000542680 VEGFAP15692 232 aaPredicted RBP15.78■□□□□ 0.12
CACNA1C-IT3-201ENST00000542680 DPEP1P16444 411 aa15.78■□□□□ 0.12
CACNA1C-IT3-201ENST00000542680 HMGB2P26583 209 aaKnown RBP15.78■□□□□ 0.12
CACNA1C-IT3-201ENST00000542680 WBP1LQ9NX94 342 aa15.78■□□□□ 0.12
CACNA1C-IT3-201ENST00000542680 MIS18AQ9NYP9 233 aa15.78■□□□□ 0.12
CACNA1C-IT3-201ENST00000542680 TIAM2Q8IVF5 1701 aa15.77■□□□□ 0.12
CACNA1C-IT3-201ENST00000542680 MMP10P09238 476 aa15.77■□□□□ 0.12
CACNA1C-IT3-201ENST00000542680 HSPA8P11142 646 aaKnown RBP15.77■□□□□ 0.12
CACNA1C-IT3-201ENST00000542680 C8orf58Q8NAV2 365 aa15.77■□□□□ 0.12
CACNA1C-IT3-201ENST00000542680 AK7Q96M32 723 aa15.77■□□□□ 0.12
CACNA1C-IT3-201ENST00000542680 KIF16BQ96L93 1317 aa15.76■□□□□ 0.11
CACNA1C-IT3-201ENST00000542680 ZC3H4Q9UPT8 1303 aaKnown RBP15.76■□□□□ 0.11
CACNA1C-IT3-201ENST00000542680 RRP1P56182 461 aaKnown RBP15.76■□□□□ 0.11
CACNA1C-IT3-201ENST00000542680 FMNL2Q96PY5 1086 aa15.76■□□□□ 0.11
CACNA1C-IT3-201ENST00000542680 SUPT16HQ9Y5B9 1047 aaKnown RBP15.76■□□□□ 0.11
CACNA1C-IT3-201ENST00000542680 C4AP0C0L4 1744 aa15.76■□□□□ 0.11
CACNA1C-IT3-201ENST00000542680 ZNF831Q5JPB2 1677 aa15.76■□□□□ 0.11
CACNA1C-IT3-201ENST00000542680 PALLDQ8WX93 1383 aa15.75■□□□□ 0.11
CACNA1C-IT3-201ENST00000542680 KCNA3P22001 575 aa15.75■□□□□ 0.11
CACNA1C-IT3-201ENST00000542680 SSFA2P28290 1259 aa15.75■□□□□ 0.11
CACNA1C-IT3-201ENST00000542680 TSPYL6Q8N831 410 aa15.75■□□□□ 0.11
CACNA1C-IT3-201ENST00000542680 CCDC30Q5VVM6 783 aa15.74■□□□□ 0.11
CACNA1C-IT3-201ENST00000542680 VSIG10Q8N0Z9 540 aa15.74■□□□□ 0.11
CACNA1C-IT3-201ENST00000542680 PIGBQ92521 554 aa15.74■□□□□ 0.11
CACNA1C-IT3-201ENST00000542680 SMC4Q9NTJ3 1288 aa15.74■□□□□ 0.11
CACNA1C-IT3-201ENST00000542680 CCDC88AQ3V6T2 1871 aa15.74■□□□□ 0.11
CACNA1C-IT3-201ENST00000542680 NEFLP07196 543 aa15.73■□□□□ 0.11
CACNA1C-IT3-201ENST00000542680 SSH1Q8WYL5 1049 aa15.73■□□□□ 0.11
CACNA1C-IT3-201ENST00000542680 GLTPD2A6NH11 291 aa15.72■□□□□ 0.11
CACNA1C-IT3-201ENST00000542680 KCNQ3O43525 872 aa15.72■□□□□ 0.11
CACNA1C-IT3-201ENST00000542680 SNRPA1P09661 255 aaKnown RBP15.72■□□□□ 0.11
CACNA1C-IT3-201ENST00000542680 VEGFBP49765 207 aa15.72■□□□□ 0.11
CACNA1C-IT3-201ENST00000542680 SLC39A6Q13433 755 aa15.72■□□□□ 0.11
CACNA1C-IT3-201ENST00000542680 KRT24Q2M2I5 525 aa15.72■□□□□ 0.11
CACNA1C-IT3-201ENST00000542680 SMARCC1Q92922 1105 aaPredicted RBP15.72■□□□□ 0.11
CACNA1C-IT3-201ENST00000542680 ZNF496Q96IT1 587 aaPredicted RBP15.72■□□□□ 0.11
CACNA1C-IT3-201ENST00000542680 ERBB4Q15303 1308 aa15.71■□□□□ 0.11
CACNA1C-IT3-201ENST00000542680 ELL2O00472 640 aaPredicted RBP15.71■□□□□ 0.11
CACNA1C-IT3-201ENST00000542680 IPO8O15397 1037 aaKnown RBP15.71■□□□□ 0.11
CACNA1C-IT3-201ENST00000542680 MS4A1P11836 297 aa15.71■□□□□ 0.11
CACNA1C-IT3-201ENST00000542680 HDGFL1Q5TGJ6 251 aa15.71■□□□□ 0.11
CACNA1C-IT3-201ENST00000542680 ARHGAP45Q92619 1136 aa15.71■□□□□ 0.11
CACNA1C-IT3-201ENST00000542680 STK31Q9BXU1 1019 aa15.71■□□□□ 0.11
CACNA1C-IT3-201ENST00000542680 TEX13AQ9BXU3 409 aaPredicted RBP15.71■□□□□ 0.11
CACNA1C-IT3-201ENST00000542680 POTECB2RU33 542 aa15.7■□□□□ 0.1
CACNA1C-IT3-201ENST00000542680 BCAR3O75815 825 aa15.7■□□□□ 0.1
CACNA1C-IT3-201ENST00000542680 ERICH6BQ5W0A0 696 aa15.7■□□□□ 0.1
CACNA1C-IT3-201ENST00000542680 MRPL50Q8N5N7 158 aaKnown RBP15.7■□□□□ 0.1
CACNA1C-IT3-201ENST00000542680 ATG3Q9NT62 314 aa15.7■□□□□ 0.1
CACNA1C-IT3-201ENST00000542680 PDE3AQ14432 1141 aa15.69■□□□□ 0.1
CACNA1C-IT3-201ENST00000542680 ZKSCAN2Q63HK3 967 aa15.69■□□□□ 0.1
CACNA1C-IT3-201ENST00000542680 PTPRCP08575 1304 aa15.68■□□□□ 0.1
CACNA1C-IT3-201ENST00000542680 CANXP27824 592 aaKnown RBP15.68■□□□□ 0.1
CACNA1C-IT3-201ENST00000542680 PIM2Q9P1W9 311 aa15.68■□□□□ 0.1
CACNA1C-IT3-201ENST00000542680 DBF4Q9UBU7 674 aaPredicted RBP15.68■□□□□ 0.1
CACNA1C-IT3-201ENST00000542680 TJP1Q07157 1748 aa15.68■□□□□ 0.1
CACNA1C-IT3-201ENST00000542680 DALRD3Q5D0E6 543 aaKnown RBP15.67■□□□□ 0.1
CACNA1C-IT3-201ENST00000542680 BCL2L13Q9BXK5 485 aa15.67■□□□□ 0.1
CACNA1C-IT3-201ENST00000542680 CCDC87Q9NVE4 849 aa15.67■□□□□ 0.1
CACNA1C-IT3-201ENST00000542680 ASAP1Q9ULH1 1129 aa15.67■□□□□ 0.1
CACNA1C-IT3-201ENST00000542680 THSD7BQ9C0I4 1608 aa15.66■□□□□ 0.1
CACNA1C-IT3-201ENST00000542680 CHADLQ6NUI6 762 aa15.66■□□□□ 0.1
CACNA1C-IT3-201ENST00000542680 ATF7IPQ6VMQ6 1270 aa15.66■□□□□ 0.1
CACNA1C-IT3-201ENST00000542680 API5Q9BZZ5 524 aaKnown RBP15.66■□□□□ 0.1
CACNA1C-IT3-201ENST00000542680 RASSF7Q02833 373 aa15.65■□□□□ 0.1
CACNA1C-IT3-201ENST00000542680 LINC00116Q8NCU8 138 aa15.65■□□□□ 0.1
CACNA1C-IT3-201ENST00000542680 DDX21Q9NR30 783 aaKnown RBP eCLIP15.65■□□□□ 0.1
CACNA1C-IT3-201ENST00000542680 HYPKQ9NX55 129 aa15.65■□□□□ 0.1
CACNA1C-IT3-201ENST00000542680 COL5A3P25940 1745 aaPredicted RBP15.65■□□□□ 0.1
CACNA1C-IT3-201ENST00000542680 PASKQ96RG2 1323 aa15.65■□□□□ 0.1
CACNA1C-IT3-201ENST00000542680 PTCD1O75127 700 aaKnown RBP15.64■□□□□ 0.09
CACNA1C-IT3-201ENST00000542680 SLC4A2P04920 1241 aa15.64■□□□□ 0.09
CACNA1C-IT3-201ENST00000542680 FRAT1Q92837 279 aaPredicted RBP15.64■□□□□ 0.09
CACNA1C-IT3-201ENST00000542680 NOB1Q9ULX3 412 aaKnown RBP15.64■□□□□ 0.09
CACNA1C-IT3-201ENST00000542680 GNPATO15228 680 aa15.63■□□□□ 0.09
CACNA1C-IT3-201ENST00000542680 STARD3NLO95772 234 aa15.63■□□□□ 0.09
CACNA1C-IT3-201ENST00000542680 TRIM27P14373 513 aa15.63■□□□□ 0.09
CACNA1C-IT3-201ENST00000542680 EIF2S2P20042 333 aaKnown RBP15.63■□□□□ 0.09
CACNA1C-IT3-201ENST00000542680 LMNB1P20700 586 aa15.63■□□□□ 0.09
CACNA1C-IT3-201ENST00000542680 PRPF38BQ5VTL8 546 aaKnown RBP15.63■□□□□ 0.09
CACNA1C-IT3-201ENST00000542680 CHPF2Q9P2E5 772 aa15.63■□□□□ 0.09
CACNA1C-IT3-201ENST00000542680 DICER1Q9UPY3 1922 aaKnown RBP15.62■□□□□ 0.09
CACNA1C-IT3-201ENST00000542680 LOC102724428A0A0B4J2F2 783 aa15.62■□□□□ 0.09
CACNA1C-IT3-201ENST00000542680 SIK1P57059 783 aa15.62■□□□□ 0.09
CACNA1C-IT3-201ENST00000542680 FLIIQ13045 1269 aa15.62■□□□□ 0.09
CACNA1C-IT3-201ENST00000542680 AAMPQ13685 434 aa15.62■□□□□ 0.09
CACNA1C-IT3-201ENST00000542680 FTSJ3Q8IY81 847 aaKnown RBP15.62■□□□□ 0.09
CACNA1C-IT3-201ENST00000542680 NLGN1Q8N2Q7 840 aa15.62■□□□□ 0.09
CACNA1C-IT3-201ENST00000542680 RBM42Q9BTD8 480 aaKnown RBP15.62■□□□□ 0.09
CACNA1C-IT3-201ENST00000542680 USP16Q9Y5T5 823 aa15.62■□□□□ 0.09
CACNA1C-IT3-201ENST00000542680 ABCC4O15439 1325 aa15.62■□□□□ 0.09
CACNA1C-IT3-201ENST00000542680 PRAMEF22A3QJZ6 481 aa15.61■□□□□ 0.09
CACNA1C-IT3-201ENST00000542680 PLIN1O60240 522 aa15.61■□□□□ 0.09
CACNA1C-IT3-201ENST00000542680 POTEIP0CG38 1075 aa15.61■□□□□ 0.09
CACNA1C-IT3-201ENST00000542680 POTEJP0CG39 1038 aa15.61■□□□□ 0.09
CACNA1C-IT3-201ENST00000542680 MAP2K1Q02750 393 aaPredicted RBP15.61■□□□□ 0.09
CACNA1C-IT3-201ENST00000542680 DZIP1LQ8IYY4 767 aaKnown RBP15.61■□□□□ 0.09
CACNA1C-IT3-201ENST00000542680 PDIA6Q15084 440 aa15.6■□□□□ 0.09
CACNA1C-IT3-201ENST00000542680 IBTKQ9P2D0 1353 aaPredicted RBP15.6■□□□□ 0.09
CACNA1C-IT3-201ENST00000542680 DLEC1Q9Y238 1755 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms