RNA–Protein interactions for RNA: ENST00000542188.5

TRPM1-203, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 6,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-203ENST00000542188 TBC1D5Q92609 795 aa16.18■□□□□ 0.18
TRPM1-203ENST00000542188 SLU7O95391 586 aaKnown RBP16.18■□□□□ 0.18
TRPM1-203ENST00000542188 MRPS9P82933 396 aaKnown RBP16.18■□□□□ 0.18
TRPM1-203ENST00000542188 SETDB1Q15047 1291 aa16.18■□□□□ 0.18
TRPM1-203ENST00000542188 CTCFLQ8NI51 663 aaPredicted RBP16.18■□□□□ 0.18
TRPM1-203ENST00000542188 ALDH3A1P30838 453 aa16.18■□□□□ 0.18
TRPM1-203ENST00000542188 LUC7L2Q9Y383 392 aaKnown RBP16.18■□□□□ 0.18
TRPM1-203ENST00000542188 BCAR3O75815 825 aa16.18■□□□□ 0.18
TRPM1-203ENST00000542188 CAPN2P17655 700 aa16.18■□□□□ 0.18
TRPM1-203ENST00000542188 CCDC114Q96M63 670 aa16.18■□□□□ 0.18
TRPM1-203ENST00000542188 CIB2O75838 187 aa16.17■□□□□ 0.18
TRPM1-203ENST00000542188 NLRP6P59044 892 aa16.17■□□□□ 0.18
TRPM1-203ENST00000542188 SARNPP82979 210 aaKnown RBP16.17■□□□□ 0.18
TRPM1-203ENST00000542188 CTAGE1Q96RT6 745 aa16.17■□□□□ 0.18
TRPM1-203ENST00000542188 TMOD2Q9NZR1 351 aa16.17■□□□□ 0.18
TRPM1-203ENST00000542188 CKAP2LQ8IYA6 745 aa16.17■□□□□ 0.18
TRPM1-203ENST00000542188 CFAP58Q5T655 872 aa16.17■□□□□ 0.18
TRPM1-203ENST00000542188 ZNF428Q96B54 188 aa16.17■□□□□ 0.18
TRPM1-203ENST00000542188 RMND1Q9NWS8 449 aa16.17■□□□□ 0.18
TRPM1-203ENST00000542188 AKAP2Q9Y2D5 859 aa16.17■□□□□ 0.18
TRPM1-203ENST00000542188 CCDC194A0A1B0GVG4 234 aa16.17■□□□□ 0.18
TRPM1-203ENST00000542188 CABP4P57796 275 aa16.17■□□□□ 0.18
TRPM1-203ENST00000542188 PIP4K2BP78356 416 aa16.17■□□□□ 0.18
TRPM1-203ENST00000542188 SF3B2Q13435 895 aaKnown RBP16.17■□□□□ 0.18
TRPM1-203ENST00000542188 AEBP2Q6ZN18 517 aaPredicted RBP16.16■□□□□ 0.18
TRPM1-203ENST00000542188 LMNTD2Q8IXW0 634 aa16.16■□□□□ 0.18
TRPM1-203ENST00000542188 ARFGAP2Q8N6H7 521 aa16.16■□□□□ 0.18
TRPM1-203ENST00000542188 SELENOSQ9BQE4 189 aa16.16■□□□□ 0.18
TRPM1-203ENST00000542188 RAPGEF2Q9Y4G8 1499 aa16.16■□□□□ 0.18
TRPM1-203ENST00000542188 CASQ2O14958 399 aaPredicted RBP16.16■□□□□ 0.18
TRPM1-203ENST00000542188 SAMD15Q9P1V8 674 aa16.16■□□□□ 0.18
TRPM1-203ENST00000542188 NAA25Q14CX7 972 aa16.16■□□□□ 0.18
TRPM1-203ENST00000542188 PRPF40BQ6NWY9 871 aaKnown RBP16.16■□□□□ 0.18
TRPM1-203ENST00000542188 KIAA1524Q8TCG1 905 aa16.16■□□□□ 0.18
TRPM1-203ENST00000542188 GOLGA1Q92805 767 aa16.16■□□□□ 0.18
TRPM1-203ENST00000542188 A0A1B0GUL7 405 aa16.16■□□□□ 0.18
TRPM1-203ENST00000542188 GLRX3O76003 335 aaKnown RBP16.15■□□□□ 0.18
TRPM1-203ENST00000542188 CABP2Q9NPB3 220 aa16.15■□□□□ 0.18
TRPM1-203ENST00000542188 IGHMBP2P38935 993 aaKnown RBP16.15■□□□□ 0.18
TRPM1-203ENST00000542188 TCERG1LQ5VWI1 586 aa16.15■□□□□ 0.18
TRPM1-203ENST00000542188 MROH2BQ7Z745 1585 aa16.15■□□□□ 0.18
TRPM1-203ENST00000542188 SLC12A7Q9Y666 1083 aa16.15■□□□□ 0.18
TRPM1-203ENST00000542188 MYO1BO43795 1136 aa16.15■□□□□ 0.18
TRPM1-203ENST00000542188 IDH1O75874 414 aaKnown RBP16.15■□□□□ 0.18
TRPM1-203ENST00000542188 CACNA2D3Q8IZS8 1091 aa16.15■□□□□ 0.18
TRPM1-203ENST00000542188 CCDC63Q8NA47 563 aa16.15■□□□□ 0.18
TRPM1-203ENST00000542188 STMN2Q93045 179 aa16.15■□□□□ 0.18
TRPM1-203ENST00000542188 RASSF4Q9H2L5 321 aa16.15■□□□□ 0.18
TRPM1-203ENST00000542188 TCP11L1Q9NUJ3 509 aa16.15■□□□□ 0.18
TRPM1-203ENST00000542188 DZIP1Q86YF9 867 aaKnown RBP16.15■□□□□ 0.18
TRPM1-203ENST00000542188 GMNNO75496 209 aa16.15■□□□□ 0.18
TRPM1-203ENST00000542188 LMBR1Q8WVP7 490 aa16.15■□□□□ 0.18
TRPM1-203ENST00000542188 TSR2Q969E8 191 aaKnown RBP16.14■□□□□ 0.18
TRPM1-203ENST00000542188 ZSWIM4Q9H7M6 989 aa16.14■□□□□ 0.18
TRPM1-203ENST00000542188 LIMCH1Q9UPQ0 1083 aa16.14■□□□□ 0.18
TRPM1-203ENST00000542188 ARL1P40616 181 aaPredicted RBP16.14■□□□□ 0.17
TRPM1-203ENST00000542188 NLRP5P59047 1200 aa16.14■□□□□ 0.17
TRPM1-203ENST00000542188 ATP11AP98196 1134 aa16.14■□□□□ 0.17
TRPM1-203ENST00000542188 DNAJC21Q5F1R6 531 aaKnown RBP16.14■□□□□ 0.17
TRPM1-203ENST00000542188 KIF1BPQ96EK5 621 aa16.14■□□□□ 0.17
TRPM1-203ENST00000542188 STRN4Q9NRL3 753 aa16.14■□□□□ 0.17
TRPM1-203ENST00000542188 AKR1B10O60218 316 aa16.14■□□□□ 0.17
TRPM1-203ENST00000542188 CPLX4Q7Z7G2 160 aa16.14■□□□□ 0.17
TRPM1-203ENST00000542188 TRIM7Q9C029 511 aa16.14■□□□□ 0.17
TRPM1-203ENST00000542188 IFT74Q96LB3 600 aa16.13■□□□□ 0.17
TRPM1-203ENST00000542188 VCX3BQ9H321 246 aa16.13■□□□□ 0.17
TRPM1-203ENST00000542188 POLR3DP05423 398 aaPredicted RBP16.13■□□□□ 0.17
TRPM1-203ENST00000542188 MX1P20591 662 aa16.13■□□□□ 0.17
TRPM1-203ENST00000542188 TNPO1Q92973 898 aaKnown RBP16.13■□□□□ 0.17
TRPM1-203ENST00000542188 RNF41Q9H4P4 317 aaPredicted RBP16.13■□□□□ 0.17
TRPM1-203ENST00000542188 MKNK2Q9HBH9 465 aa16.13■□□□□ 0.17
TRPM1-203ENST00000542188 SPG7Q9UQ90 795 aa16.13■□□□□ 0.17
TRPM1-203ENST00000542188 NACADO15069 1562 aa16.13■□□□□ 0.17
TRPM1-203ENST00000542188 MCM6Q14566 821 aa16.13■□□□□ 0.17
TRPM1-203ENST00000542188 AKNAQ7Z591 1439 aa16.13■□□□□ 0.17
TRPM1-203ENST00000542188 ZNF165P49910 485 aa16.13■□□□□ 0.17
TRPM1-203ENST00000542188 SPTY2D1Q68D10 685 aaPredicted RBP16.13■□□□□ 0.17
TRPM1-203ENST00000542188 SSFA2P28290 1259 aa16.12■□□□□ 0.17
TRPM1-203ENST00000542188 CCDC94Q9BW85 323 aaPredicted RBP16.12■□□□□ 0.17
TRPM1-203ENST00000542188 CTAGE9A4FU28 777 aa16.12■□□□□ 0.17
TRPM1-203ENST00000542188 GOLGA8AA7E2F4 631 aa16.12■□□□□ 0.17
TRPM1-203ENST00000542188 GOLGA8BA8MQT2 603 aa16.12■□□□□ 0.17
TRPM1-203ENST00000542188 TUBBP07437 444 aa16.12■□□□□ 0.17
TRPM1-203ENST00000542188 IQCA1Q86XH1 822 aa16.12■□□□□ 0.17
TRPM1-203ENST00000542188 CCDC50Q8IVM0 306 aa16.12■□□□□ 0.17
TRPM1-203ENST00000542188 SEC62Q99442 399 aaKnown RBP16.12■□□□□ 0.17
TRPM1-203ENST00000542188 PUF60Q9UHX1 559 aaKnown RBP16.12■□□□□ 0.17
TRPM1-203ENST00000542188 GBP1P32455 592 aa16.12■□□□□ 0.17
TRPM1-203ENST00000542188 UBE2HP62256 183 aa16.12■□□□□ 0.17
TRPM1-203ENST00000542188 SYCP3Q8IZU3 236 aa16.12■□□□□ 0.17
TRPM1-203ENST00000542188 RBM28Q9NW13 759 aaKnown RBP16.12■□□□□ 0.17
TRPM1-203ENST00000542188 ATP2A2P16615 1042 aaKnown RBP16.11■□□□□ 0.17
TRPM1-203ENST00000542188 CCDC174Q6PII3 467 aa16.11■□□□□ 0.17
TRPM1-203ENST00000542188 NAPBQ9H115 298 aa16.11■□□□□ 0.17
TRPM1-203ENST00000542188 IL1RAPL2Q9NP60 686 aa16.11■□□□□ 0.17
TRPM1-203ENST00000542188 N4BP3O15049 544 aa16.11■□□□□ 0.17
TRPM1-203ENST00000542188 CCDC102BQ68D86 513 aa16.11■□□□□ 0.17
TRPM1-203ENST00000542188 USP37Q86T82 979 aa16.11■□□□□ 0.17
TRPM1-203ENST00000542188 CCDC144CPQ8IYA2 1237 aa16.11■□□□□ 0.17
TRPM1-203ENST00000542188 SMC1BQ8NDV3 1235 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms