RNA–Protein interactions for RNA: ENST00000542128.5

KDM3A-216, Transcript of lysine demethylase 3A, humanhuman

TSL 5 BASIC

Gene KDM3A, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-216ENST00000542128 CEP57L1Q8IYX8 460 aa14.5□□□□□ -0.09
KDM3A-216ENST00000542128 NFE2L2Q16236 605 aa14.5□□□□□ -0.09
KDM3A-216ENST00000542128 USP48Q86UV5 1035 aa14.5□□□□□ -0.09
KDM3A-216ENST00000542128 GNL3LQ9NVN8 582 aaKnown RBP14.5□□□□□ -0.09
KDM3A-216ENST00000542128 CASTP20810 708 aaKnown RBP14.5□□□□□ -0.09
KDM3A-216ENST00000542128 FAM200AQ8TCP9 573 aa14.5□□□□□ -0.09
KDM3A-216ENST00000542128 JRKLQ9Y4A0 524 aa14.5□□□□□ -0.09
KDM3A-216ENST00000542128 TMEM57Q8N5G2 664 aa14.5□□□□□ -0.09
KDM3A-216ENST00000542128 TBC1D2BQ9UPU7 963 aa14.5□□□□□ -0.09
KDM3A-216ENST00000542128 IPO7O95373 1038 aaKnown RBP14.49□□□□□ -0.09
KDM3A-216ENST00000542128 CPLX2Q6PUV4 134 aaKnown RBP14.49□□□□□ -0.09
KDM3A-216ENST00000542128 ZCRB1Q8TBF4 217 aaKnown RBP14.49□□□□□ -0.09
KDM3A-216ENST00000542128 SPATA32Q96LK8 384 aa14.49□□□□□ -0.09
KDM3A-216ENST00000542128 CRACR2AQ9BSW2 395 aa14.49□□□□□ -0.09
KDM3A-216ENST00000542128 BTG4Q9NY30 223 aa14.49□□□□□ -0.09
KDM3A-216ENST00000542128 MTMR7Q9Y216 660 aa14.49□□□□□ -0.09
KDM3A-216ENST00000542128 TTC21BQ7Z4L5 1316 aa14.49□□□□□ -0.09
KDM3A-216ENST00000542128 PES1O00541 588 aaKnown RBP14.49□□□□□ -0.09
KDM3A-216ENST00000542128 NBPF14Q5TI25 921 aa14.49□□□□□ -0.09
KDM3A-216ENST00000542128 WDR63Q8IWG1 891 aa14.49□□□□□ -0.09
KDM3A-216ENST00000542128 SIL1Q9H173 461 aa14.49□□□□□ -0.09
KDM3A-216ENST00000542128 SERPINC1P01008 464 aa14.49□□□□□ -0.09
KDM3A-216ENST00000542128 CEBPZQ03701 1054 aaKnown RBP14.49□□□□□ -0.09
KDM3A-216ENST00000542128 CAGE1Q8TC20 777 aa14.49□□□□□ -0.09
KDM3A-216ENST00000542128 CHMP4CQ96CF2 233 aa14.49□□□□□ -0.09
KDM3A-216ENST00000542128 VPS18Q9P253 973 aa14.49□□□□□ -0.09
KDM3A-216ENST00000542128 LARP1BQ659C4 914 aaKnown RBP14.48□□□□□ -0.09
KDM3A-216ENST00000542128 ZGPATQ8N5A5 531 aaKnown RBP14.48□□□□□ -0.09
KDM3A-216ENST00000542128 TCEAL9Q9UHQ7 104 aa14.48□□□□□ -0.09
KDM3A-216ENST00000542128 RFC4P35249 363 aa14.48□□□□□ -0.09
KDM3A-216ENST00000542128 TAF7Q15545 349 aaPredicted RBP14.48□□□□□ -0.09
KDM3A-216ENST00000542128 HSP90AB2PQ58FF8 381 aa14.48□□□□□ -0.09
KDM3A-216ENST00000542128 IKQ13123 557 aaPredicted RBP14.48□□□□□ -0.09
KDM3A-216ENST00000542128 TSPOAP1O95153 1857 aa14.48□□□□□ -0.09
KDM3A-216ENST00000542128 FOSBP53539 338 aa14.47□□□□□ -0.09
KDM3A-216ENST00000542128 GSDMDP57764 484 aa14.47□□□□□ -0.09
KDM3A-216ENST00000542128 BRMS1Q9HCU9 246 aa14.47□□□□□ -0.09
KDM3A-216ENST00000542128 GCP02774 474 aa14.47□□□□□ -0.09
KDM3A-216ENST00000542128 RNF187Q5TA31 235 aaPredicted RBP14.47□□□□□ -0.09
KDM3A-216ENST00000542128 DNAI1Q9UI46 699 aa14.47□□□□□ -0.09
KDM3A-216ENST00000542128 ZSCAN12O43309 604 aa14.47□□□□□ -0.09
KDM3A-216ENST00000542128 RPAINQ86UA6 219 aa14.47□□□□□ -0.09
KDM3A-216ENST00000542128 FERMT3Q86UX7 667 aa14.47□□□□□ -0.09
KDM3A-216ENST00000542128 DYDC1Q8WWB3 177 aa14.47□□□□□ -0.09
KDM3A-216ENST00000542128 WWC3Q9ULE0 1092 aa14.47□□□□□ -0.09
KDM3A-216ENST00000542128 GBP2P32456 591 aaPredicted RBP14.47□□□□□ -0.09
KDM3A-216ENST00000542128 YEATS2Q9ULM3 1422 aa14.46□□□□□ -0.09
KDM3A-216ENST00000542128 TMPOP42166 694 aaKnown RBP14.46□□□□□ -0.09
KDM3A-216ENST00000542128 E2F4Q16254 413 aa14.46□□□□□ -0.09
KDM3A-216ENST00000542128 NEO1Q92859 1461 aa14.46□□□□□ -0.09
KDM3A-216ENST00000542128 IGHMBP2P38935 993 aaKnown RBP14.46□□□□□ -0.1
KDM3A-216ENST00000542128 ZSWIM4Q9H7M6 989 aa14.46□□□□□ -0.1
KDM3A-216ENST00000542128 MPHOSPH10O00566 681 aaKnown RBP14.45□□□□□ -0.1
KDM3A-216ENST00000542128 TMX3Q96JJ7 454 aa14.45□□□□□ -0.1
KDM3A-216ENST00000542128 IBTKQ9P2D0 1353 aaPredicted RBP14.45□□□□□ -0.1
KDM3A-216ENST00000542128 ABCA8O94911 1581 aa14.45□□□□□ -0.1
KDM3A-216ENST00000542128 CEP126Q9P2H0 1117 aa14.45□□□□□ -0.1
KDM3A-216ENST00000542128 EBAG9O00559 213 aa14.45□□□□□ -0.1
KDM3A-216ENST00000542128 GPTP24298 496 aa14.45□□□□□ -0.1
KDM3A-216ENST00000542128 DDX17Q92841 729 aaKnown RBP14.45□□□□□ -0.1
KDM3A-216ENST00000542128 ZNF215Q9UL58 517 aaPredicted RBP14.45□□□□□ -0.1
KDM3A-216ENST00000542128 OLFM4Q6UX06 510 aa14.45□□□□□ -0.1
KDM3A-216ENST00000542128 CEP57Q86XR8 500 aa14.45□□□□□ -0.1
KDM3A-216ENST00000542128 TTC21AQ8NDW8 1320 aa14.44□□□□□ -0.1
KDM3A-216ENST00000542128 ERICH2A1L162 156 aa14.44□□□□□ -0.1
KDM3A-216ENST00000542128 TFCP2L1Q9NZI6 479 aa14.44□□□□□ -0.1
KDM3A-216ENST00000542128 CPSF2Q9P2I0 782 aaKnown RBP14.44□□□□□ -0.1
KDM3A-216ENST00000542128 DDX41Q9UJV9 622 aaKnown RBP14.44□□□□□ -0.1
KDM3A-216ENST00000542128 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.44□□□□□ -0.17e-8■■■□□ 14.7
KDM3A-216ENST00000542128 PHACTR2O75167 634 aa14.44□□□□□ -0.1
KDM3A-216ENST00000542128 CCDC158Q5M9N0 1113 aa14.44□□□□□ -0.1
KDM3A-216ENST00000542128 NFXL1Q6ZNB6 911 aa14.44□□□□□ -0.1
KDM3A-216ENST00000542128 ZSCAN29Q8IWY8 852 aaPredicted RBP14.44□□□□□ -0.1
KDM3A-216ENST00000542128 ZBTB3Q9H5J0 574 aa14.44□□□□□ -0.1
KDM3A-216ENST00000542128 TRMT112Q9UI30 125 aaKnown RBP14.44□□□□□ -0.1
KDM3A-216ENST00000542128 CFAP65Q6ZU64 1925 aaKnown RBP14.44□□□□□ -0.1
KDM3A-216ENST00000542128 CPLX1O14810 134 aa14.44□□□□□ -0.1
KDM3A-216ENST00000542128 GNAI2P04899 355 aa14.44□□□□□ -0.1
KDM3A-216ENST00000542128 OAS2P29728 719 aaKnown RBP14.43□□□□□ -0.1
KDM3A-216ENST00000542128 CNPY2Q9Y2B0 182 aa14.43□□□□□ -0.1
KDM3A-216ENST00000542128 MYCNP04198 464 aaPredicted RBP14.43□□□□□ -0.1
KDM3A-216ENST00000542128 IL2RBP14784 551 aa14.43□□□□□ -0.1
KDM3A-216ENST00000542128 RAD51AP2Q09MP3 1159 aa14.43□□□□□ -0.1
KDM3A-216ENST00000542128 HDAC1Q13547 482 aaPredicted RBP14.43□□□□□ -0.1
KDM3A-216ENST00000542128 SYT10Q6XYQ8 523 aa14.43□□□□□ -0.1
KDM3A-216ENST00000542128 MICALCLQ6ZW33 695 aa14.43□□□□□ -0.1
KDM3A-216ENST00000542128 RALYLQ86SE5 291 aaKnown RBP14.43□□□□□ -0.1
KDM3A-216ENST00000542128 SRRTQ9BXP5 876 aaKnown RBP14.43□□□□□ -0.1
KDM3A-216ENST00000542128 RRP15Q9Y3B9 282 aaKnown RBP14.43□□□□□ -0.1
KDM3A-216ENST00000542128 MAGI3Q5TCQ9 1506 aa14.43□□□□□ -0.1
KDM3A-216ENST00000542128 SCAF11Q99590 1463 aaKnown RBP14.43□□□□□ -0.1
KDM3A-216ENST00000542128 MYO1CO00159 1063 aa14.43□□□□□ -0.1
KDM3A-216ENST00000542128 NEBLO76041 1014 aa14.43□□□□□ -0.1
KDM3A-216ENST00000542128 LTKP29376 864 aa14.43□□□□□ -0.1
KDM3A-216ENST00000542128 PPP2R5AQ15172 486 aa14.43□□□□□ -0.1
KDM3A-216ENST00000542128 RPGRQ92834 1020 aaKnown RBP14.43□□□□□ -0.1
KDM3A-216ENST00000542128 FSD1Q9BTV5 496 aa14.43□□□□□ -0.1
KDM3A-216ENST00000542128 GOLGA6L7A0A1B0GV03 622 aa14.42□□□□□ -0.1
KDM3A-216ENST00000542128 ANO6Q4KMQ2 910 aa14.42□□□□□ -0.1
KDM3A-216ENST00000542128 PAIP2Q9BPZ3 127 aaKnown RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms