RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 RIMS1Q86UR5 1692 aaKnown RBP18.37■□□□□ 0.53
CNOT9-208ENST00000542068 HSPA4P34932 840 aa18.37■□□□□ 0.53
CNOT9-208ENST00000542068 CCDC183Q5T5S1 534 aa18.37■□□□□ 0.53
CNOT9-208ENST00000542068 PROSER2Q86WR7 435 aaPredicted RBP18.37■□□□□ 0.53
CNOT9-208ENST00000542068 DIAPH3Q9NSV4 1193 aa18.37■□□□□ 0.53
CNOT9-208ENST00000542068 ANAPC15P60006 121 aa18.37■□□□□ 0.53
CNOT9-208ENST00000542068 NOLC1Q14978 699 aaKnown RBP eCLIP18.37■□□□□ 0.53
CNOT9-208ENST00000542068 SOS1Q07889 1333 aaPredicted RBP18.37■□□□□ 0.53
CNOT9-208ENST00000542068 USP31Q70CQ4 1352 aa18.36■□□□□ 0.53
CNOT9-208ENST00000542068 GCP02774 474 aa18.36■□□□□ 0.53
CNOT9-208ENST00000542068 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.36■□□□□ 0.53
CNOT9-208ENST00000542068 IFIT2P09913 472 aaKnown RBP18.36■□□□□ 0.53
CNOT9-208ENST00000542068 GJB2P29033 226 aa18.36■□□□□ 0.53
CNOT9-208ENST00000542068 ANKRD24Q8TF21 1146 aa18.36■□□□□ 0.53
CNOT9-208ENST00000542068 IP6K1Q92551 441 aa18.36■□□□□ 0.53
CNOT9-208ENST00000542068 TAOK2Q9UL54 1235 aa18.36■□□□□ 0.53
CNOT9-208ENST00000542068 MCM5P33992 734 aa18.35■□□□□ 0.53
CNOT9-208ENST00000542068 RIC3Q7Z5B4 369 aa18.35■□□□□ 0.53
CNOT9-208ENST00000542068 KLHDC4Q8TBB5 520 aa18.35■□□□□ 0.53
CNOT9-208ENST00000542068 CCDC8Q9H0W5 538 aaPredicted RBP18.35■□□□□ 0.53
CNOT9-208ENST00000542068 DYNC1I1O14576 645 aa18.35■□□□□ 0.53
CNOT9-208ENST00000542068 EIF4A1P60842 406 aaKnown RBP18.35■□□□□ 0.53
CNOT9-208ENST00000542068 CHRNA2Q15822 529 aa18.35■□□□□ 0.53
CNOT9-208ENST00000542068 ADCK5Q3MIX3 580 aa18.35■□□□□ 0.53
CNOT9-208ENST00000542068 TCHHQ07283 1943 aa18.35■□□□□ 0.53
CNOT9-208ENST00000542068 LIMCH1Q9UPQ0 1083 aa18.34■□□□□ 0.53
CNOT9-208ENST00000542068 REREQ9P2R6 1566 aa18.34■□□□□ 0.53
CNOT9-208ENST00000542068 PTH1RQ03431 593 aa18.34■□□□□ 0.53
CNOT9-208ENST00000542068 CNTROBQ8N137 903 aa18.34■□□□□ 0.53
CNOT9-208ENST00000542068 CLASRPQ8N2M8 674 aaKnown RBP18.34■□□□□ 0.53
CNOT9-208ENST00000542068 RPAP1Q9BWH6 1393 aaPredicted RBP18.34■□□□□ 0.53
CNOT9-208ENST00000542068 SGSM2O43147 1006 aa18.34■□□□□ 0.53
CNOT9-208ENST00000542068 ITSN1Q15811 1721 aa18.33■□□□□ 0.53
CNOT9-208ENST00000542068 F13A1P00488 732 aa18.33■□□□□ 0.52
CNOT9-208ENST00000542068 CBX1P83916 185 aa18.33■□□□□ 0.52
CNOT9-208ENST00000542068 STK3Q13188 491 aa18.33■□□□□ 0.52
CNOT9-208ENST00000542068 AACSQ86V21 672 aa18.33■□□□□ 0.52
CNOT9-208ENST00000542068 STAP2Q9UGK3 403 aa18.33■□□□□ 0.52
CNOT9-208ENST00000542068 CKAP2LQ8IYA6 745 aa18.33■□□□□ 0.52
CNOT9-208ENST00000542068 RAPGEF4Q8WZA2 1011 aa18.33■□□□□ 0.52
CNOT9-208ENST00000542068 PDRG1Q9NUG6 133 aa18.33■□□□□ 0.52
CNOT9-208ENST00000542068 ZHX1Q9UKY1 873 aaPredicted RBP18.33■□□□□ 0.52
CNOT9-208ENST00000542068 TERF1P54274 439 aa18.32■□□□□ 0.52
CNOT9-208ENST00000542068 COL9A3Q14050 684 aaPredicted RBP18.32■□□□□ 0.52
CNOT9-208ENST00000542068 PI4K2BQ8TCG2 481 aa18.32■□□□□ 0.52
CNOT9-208ENST00000542068 KIF1BPQ96EK5 621 aa18.32■□□□□ 0.52
CNOT9-208ENST00000542068 TFIP11Q9UBB9 837 aaKnown RBP18.32■□□□□ 0.52
CNOT9-208ENST00000542068 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.32■□□□□ 0.52
CNOT9-208ENST00000542068 HTATSF1O43719 755 aaKnown RBP18.31■□□□□ 0.52
CNOT9-208ENST00000542068 UBE2HP62256 183 aa18.31■□□□□ 0.52
CNOT9-208ENST00000542068 LSG1Q9H089 658 aaKnown RBP18.31■□□□□ 0.52
CNOT9-208ENST00000542068 RAD50Q92878 1312 aa18.31■□□□□ 0.52
CNOT9-208ENST00000542068 FOSBP53539 338 aa18.31■□□□□ 0.52
CNOT9-208ENST00000542068 DRC7Q8IY82 874 aa18.31■□□□□ 0.52
CNOT9-208ENST00000542068 AP5Z1O43299 807 aa18.31■□□□□ 0.52
CNOT9-208ENST00000542068 AXIN2Q9Y2T1 843 aa18.31■□□□□ 0.52
CNOT9-208ENST00000542068 A0A0G2JS52 829 aa18.3■□□□□ 0.52
CNOT9-208ENST00000542068 KCNH5Q8NCM2 988 aa18.3■□□□□ 0.52
CNOT9-208ENST00000542068 MAP7D2Q96T17 732 aa18.3■□□□□ 0.52
CNOT9-208ENST00000542068 BOLA2Q9H3K6 86 aa18.3■□□□□ 0.52
CNOT9-208ENST00000542068 PYCARDQ9ULZ3 195 aa18.3■□□□□ 0.52
CNOT9-208ENST00000542068 KRT28Q7Z3Y7 464 aa18.3■□□□□ 0.52
CNOT9-208ENST00000542068 DBF4Q9UBU7 674 aaPredicted RBP18.3■□□□□ 0.52
CNOT9-208ENST00000542068 SPDYE4A6NLX3 237 aa18.29■□□□□ 0.52
CNOT9-208ENST00000542068 KDM4AO75164 1064 aa18.29■□□□□ 0.52
CNOT9-208ENST00000542068 SSH3Q8TE77 659 aa18.29■□□□□ 0.52
CNOT9-208ENST00000542068 KDRP35968 1356 aa18.29■□□□□ 0.52
CNOT9-208ENST00000542068 G3BP1Q13283 466 aaKnown RBP eCLIP18.29■□□□□ 0.52
CNOT9-208ENST00000542068 PIBF1Q8WXW3 757 aa18.29■□□□□ 0.52
CNOT9-208ENST00000542068 NDUFB9Q9Y6M9 179 aa18.29■□□□□ 0.52
CNOT9-208ENST00000542068 PPFIA3O75145 1194 aa18.28■□□□□ 0.52
CNOT9-208ENST00000542068 FAM184AQ8NB25 1140 aa18.28■□□□□ 0.52
CNOT9-208ENST00000542068 NFATC2IPQ8NCF5 419 aa18.28■□□□□ 0.52
CNOT9-208ENST00000542068 PEAK1Q9H792 1746 aa18.28■□□□□ 0.52
CNOT9-208ENST00000542068 ATP5J2-PTCD1G3V325 749 aa18.28■□□□□ 0.52
CNOT9-208ENST00000542068 PTCD1O75127 700 aaKnown RBP18.28■□□□□ 0.52
CNOT9-208ENST00000542068 RNMTO43148 476 aaKnown RBP18.27■□□□□ 0.52
CNOT9-208ENST00000542068 AKAP4Q5JQC9 854 aa18.27■□□□□ 0.52
CNOT9-208ENST00000542068 LARP1BQ659C4 914 aaKnown RBP18.27■□□□□ 0.52
CNOT9-208ENST00000542068 MYRIPQ8NFW9 859 aa18.27■□□□□ 0.52
CNOT9-208ENST00000542068 TTC14Q96N46 770 aa18.27■□□□□ 0.52
CNOT9-208ENST00000542068 C3P01024 1663 aa18.27■□□□□ 0.52
CNOT9-208ENST00000542068 SETD1AO15047 1707 aaKnown RBP18.27■□□□□ 0.52
CNOT9-208ENST00000542068 GOLGA6L4A6NEF3 574 aa18.27■□□□□ 0.52
CNOT9-208ENST00000542068 BEND3Q5T5X7 828 aa18.27■□□□□ 0.52
CNOT9-208ENST00000542068 FAM227BQ96M60 508 aa18.27■□□□□ 0.52
CNOT9-208ENST00000542068 NAP1L2Q9ULW6 460 aaPredicted RBP18.27■□□□□ 0.52
CNOT9-208ENST00000542068 CYP46A1Q9Y6A2 500 aa18.27■□□□□ 0.52
CNOT9-208ENST00000542068 LUZP1Q86V48 1076 aa18.27■□□□□ 0.51
CNOT9-208ENST00000542068 MTMR6Q9Y217 621 aa18.27■□□□□ 0.51
CNOT9-208ENST00000542068 IGSF3O75054 1194 aa18.26■□□□□ 0.51
CNOT9-208ENST00000542068 CEBPZQ03701 1054 aaKnown RBP18.26■□□□□ 0.51
CNOT9-208ENST00000542068 ME3Q16798 604 aa18.26■□□□□ 0.51
CNOT9-208ENST00000542068 HYPKQ9NX55 129 aa18.26■□□□□ 0.51
CNOT9-208ENST00000542068 ATP6V1DQ9Y5K8 247 aa18.26■□□□□ 0.51
CNOT9-208ENST00000542068 MYD88Q99836 296 aa18.25■□□□□ 0.51
CNOT9-208ENST00000542068 MON2Q7Z3U7 1717 aa18.25■□□□□ 0.51
CNOT9-208ENST00000542068 RAB11FIP3O75154 756 aa18.25■□□□□ 0.51
CNOT9-208ENST00000542068 LIG1P18858 919 aa18.25■□□□□ 0.51
CNOT9-208ENST00000542068 PTGS1P23219 599 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms