RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 GNEQ9Y223 722 aaKnown RBP8.16□□□□□ -1.1
CPSF7-220ENST00000541963 ABCA6Q8N139 1617 aa8.15□□□□□ -1.1
CPSF7-220ENST00000541963 A2MP01023 1474 aa8.15□□□□□ -1.1
CPSF7-220ENST00000541963 CCDC141Q6ZP82 1450 aa8.15□□□□□ -1.1
CPSF7-220ENST00000541963 LILRA1O75019 489 aa8.15□□□□□ -1.1
CPSF7-220ENST00000541963 INHAP05111 366 aa8.15□□□□□ -1.1
CPSF7-220ENST00000541963 TSEN2Q8NCE0 465 aaKnown RBP8.15□□□□□ -1.1
CPSF7-220ENST00000541963 VTI1AQ96AJ9 217 aa8.15□□□□□ -1.1
CPSF7-220ENST00000541963 SERTAD1Q9UHV2 236 aa8.15□□□□□ -1.1
CPSF7-220ENST00000541963 RIMS1Q86UR5 1692 aaKnown RBP8.14□□□□□ -1.11
CPSF7-220ENST00000541963 WASLO00401 505 aaPredicted RBP8.14□□□□□ -1.11
CPSF7-220ENST00000541963 GGT6Q6P531 493 aa8.14□□□□□ -1.11
CPSF7-220ENST00000541963 C1orf216Q8TAB5 229 aa8.14□□□□□ -1.11
CPSF7-220ENST00000541963 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.14□□□□□ -1.11
CPSF7-220ENST00000541963 FER1L4A9Z1Z3 1794 aa8.14□□□□□ -1.11
CPSF7-220ENST00000541963 CNTLNQ9NXG0 1405 aa8.13□□□□□ -1.11
CPSF7-220ENST00000541963 DHX29Q7Z478 1369 aaKnown RBP8.13□□□□□ -1.11
CPSF7-220ENST00000541963 TMEM229AB2RXF0 380 aa8.13□□□□□ -1.11
CPSF7-220ENST00000541963 TNFRSF10AO00220 468 aa8.13□□□□□ -1.11
CPSF7-220ENST00000541963 ZIC2O95409 532 aaPredicted RBP8.13□□□□□ -1.11
CPSF7-220ENST00000541963 ADD1P35611 737 aaKnown RBP8.13□□□□□ -1.11
CPSF7-220ENST00000541963 WDR4P57081 412 aaKnown RBP8.13□□□□□ -1.11
CPSF7-220ENST00000541963 GAS2L2Q8NHY3 880 aa8.13□□□□□ -1.11
CPSF7-220ENST00000541963 CXXC1Q9P0U4 656 aaPredicted RBP8.13□□□□□ -1.11
CPSF7-220ENST00000541963 CHMP3Q9Y3E7 222 aa8.13□□□□□ -1.11
CPSF7-220ENST00000541963 ADGBQ8N7X0 1667 aa8.13□□□□□ -1.11
CPSF7-220ENST00000541963 ARHGEF5Q12774 1597 aa8.13□□□□□ -1.11
CPSF7-220ENST00000541963 SIGLEC1Q9BZZ2 1709 aa8.12□□□□□ -1.11
CPSF7-220ENST00000541963 KIF3BO15066 747 aa8.12□□□□□ -1.11
CPSF7-220ENST00000541963 ADH1AP07327 375 aa8.12□□□□□ -1.11
CPSF7-220ENST00000541963 GTF2E1P29083 439 aaPredicted RBP8.12□□□□□ -1.11
CPSF7-220ENST00000541963 CEBPAP49715 358 aaPredicted RBP8.12□□□□□ -1.11
CPSF7-220ENST00000541963 SCNN1DP51172 638 aa8.12□□□□□ -1.11
CPSF7-220ENST00000541963 PHLDB3Q6NSJ2 640 aa8.12□□□□□ -1.11
CPSF7-220ENST00000541963 NLRP3Q96P20 1036 aa8.12□□□□□ -1.11
CPSF7-220ENST00000541963 ETNK1Q9HBU6 452 aa8.12□□□□□ -1.11
CPSF7-220ENST00000541963 ARHGEF10LQ9HCE6 1279 aa8.12□□□□□ -1.11
CPSF7-220ENST00000541963 INO80Q9ULG1 1556 aaPredicted RBP8.12□□□□□ -1.11
CPSF7-220ENST00000541963 J3QL48 77 aa8.11□□□□□ -1.11
CPSF7-220ENST00000541963 GDF9O60383 454 aa8.11□□□□□ -1.11
CPSF7-220ENST00000541963 PTCD1O75127 700 aaKnown RBP8.11□□□□□ -1.11
CPSF7-220ENST00000541963 LGR5O75473 907 aa8.11□□□□□ -1.11
CPSF7-220ENST00000541963 IGFBP4P22692 258 aa8.11□□□□□ -1.11
CPSF7-220ENST00000541963 TXNDC2Q86VQ3 553 aa8.11□□□□□ -1.11
CPSF7-220ENST00000541963 TNS4Q8IZW8 715 aa8.11□□□□□ -1.11
CPSF7-220ENST00000541963 SCG3Q8WXD2 468 aaKnown RBP8.11□□□□□ -1.11
CPSF7-220ENST00000541963 SLAIN2Q9P270 581 aa8.11□□□□□ -1.11
CPSF7-220ENST00000541963 WEE1P30291 646 aa8.1□□□□□ -1.11
CPSF7-220ENST00000541963 SMTNP53814 917 aa8.1□□□□□ -1.11
CPSF7-220ENST00000541963 FAM50AQ14320 339 aaKnown RBP8.1□□□□□ -1.11
CPSF7-220ENST00000541963 SND1Q7KZF4 910 aaKnown RBP eCLIP8.1□□□□□ -1.11
CPSF7-220ENST00000541963 TAS1R3Q7RTX0 852 aa8.1□□□□□ -1.11
CPSF7-220ENST00000541963 ITPKCQ96DU7 683 aa8.1□□□□□ -1.11
CPSF7-220ENST00000541963 XAGE2Q96GT9 111 aa8.1□□□□□ -1.11
CPSF7-220ENST00000541963 SLC4A9Q96Q91 983 aa8.1□□□□□ -1.11
CPSF7-220ENST00000541963 RAB6BQ9NRW1 208 aa8.1□□□□□ -1.11
CPSF7-220ENST00000541963 FGD6Q6ZV73 1430 aa8.1□□□□□ -1.11
CPSF7-220ENST00000541963 PTPN23Q9H3S7 1636 aa8.1□□□□□ -1.11
CPSF7-220ENST00000541963 SETD1BQ9UPS6 1966 aaKnown RBP8.1□□□□□ -1.11
CPSF7-220ENST00000541963 ZMYM3Q14202 1370 aa8.1□□□□□ -1.11
CPSF7-220ENST00000541963 ATAD2Q6PL18 1390 aa8.1□□□□□ -1.11
CPSF7-220ENST00000541963 WASHC2CQ9Y4E1 1318 aa8.09□□□□□ -1.11
CPSF7-220ENST00000541963 A6NJY4 79 aa8.09□□□□□ -1.11
CPSF7-220ENST00000541963 MEN1O00255 615 aa8.09□□□□□ -1.11
CPSF7-220ENST00000541963 FOXO3O43524 673 aa8.09□□□□□ -1.11
CPSF7-220ENST00000541963 UPP2O95045 317 aa8.09□□□□□ -1.11
CPSF7-220ENST00000541963 PTGIRP43119 386 aa8.09□□□□□ -1.11
CPSF7-220ENST00000541963 MFAP1P55081 439 aaKnown RBP8.09□□□□□ -1.11
CPSF7-220ENST00000541963 PRR20EP86478 221 aa8.09□□□□□ -1.11
CPSF7-220ENST00000541963 PRR20CP86479 221 aa8.09□□□□□ -1.11
CPSF7-220ENST00000541963 PRR20DP86480 221 aa8.09□□□□□ -1.11
CPSF7-220ENST00000541963 PRR20BP86481 221 aa8.09□□□□□ -1.11
CPSF7-220ENST00000541963 PRR20AP86496 221 aa8.09□□□□□ -1.11
CPSF7-220ENST00000541963 CBLBQ13191 982 aa8.09□□□□□ -1.11
CPSF7-220ENST00000541963 OCLNQ16625 522 aa8.09□□□□□ -1.11
CPSF7-220ENST00000541963 CCDC27Q2M243 656 aa8.09□□□□□ -1.11
CPSF7-220ENST00000541963 CNKSR1Q969H4 720 aa8.09□□□□□ -1.11
CPSF7-220ENST00000541963 ESYT1Q9BSJ8 1104 aa8.09□□□□□ -1.11
CPSF7-220ENST00000541963 TOR4AQ9NXH8 423 aa8.09□□□□□ -1.11
CPSF7-220ENST00000541963 PLXNC1O60486 1568 aa8.09□□□□□ -1.11
CPSF7-220ENST00000541963 MAST1Q9Y2H9 1570 aa8.09□□□□□ -1.11
CPSF7-220ENST00000541963 TCOF1Q13428 1488 aaKnown RBP8.08□□□□□ -1.12
CPSF7-220ENST00000541963 A0A1W2PRU2 124 aa8.08□□□□□ -1.12
CPSF7-220ENST00000541963 PPP1R12BO60237 982 aaPredicted RBP8.08□□□□□ -1.12
CPSF7-220ENST00000541963 RGS20O76081 388 aa8.08□□□□□ -1.12
CPSF7-220ENST00000541963 STAU1O95793 577 aaKnown RBP8.08□□□□□ -1.12
CPSF7-220ENST00000541963 ABL1P00519 1130 aa8.08□□□□□ -1.12
CPSF7-220ENST00000541963 RELBQ01201 579 aa8.08□□□□□ -1.12
CPSF7-220ENST00000541963 TLR1Q15399 786 aa8.08□□□□□ -1.12
CPSF7-220ENST00000541963 Q6ZVU0 165 aa8.08□□□□□ -1.12
CPSF7-220ENST00000541963 NBPF15Q8N660 670 aa8.08□□□□□ -1.12
CPSF7-220ENST00000541963 RRP7BPQ9NSQ0 103 aa8.08□□□□□ -1.12
CPSF7-220ENST00000541963 ANKRD30AQ9BXX3 1397 aa8.08□□□□□ -1.12
CPSF7-220ENST00000541963 ABCC5O15440 1437 aa8.07□□□□□ -1.12
CPSF7-220ENST00000541963 DAPK1P53355 1430 aa8.07□□□□□ -1.12
CPSF7-220ENST00000541963 UHRF1BP1Q6BDS2 1440 aa8.07□□□□□ -1.12
CPSF7-220ENST00000541963 CDK2AP1O14519 115 aa8.07□□□□□ -1.12
CPSF7-220ENST00000541963 SMPD1P17405 629 aa8.07□□□□□ -1.12
CPSF7-220ENST00000541963 CLN3Q13286 438 aa8.07□□□□□ -1.12
CPSF7-220ENST00000541963 MKNK1Q9BUB5 465 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms