RNA–Protein interactions for RNA: ENST00000541735.5

DMD-228, Transcript of dystrophin, humanhuman

TSL 5 BASIC

Gene DMD, Length 7,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-228ENST00000541735 ZBTB33Q86T24 672 aa7.31□□□□□ -1.24
DMD-228ENST00000541735 CCDC40Q4G0X9 1142 aa7.31□□□□□ -1.24
DMD-228ENST00000541735 PPP1R14CQ8TAE6 165 aa7.31□□□□□ -1.24
DMD-228ENST00000541735 IVNS1ABPQ9Y6Y0 642 aa7.31□□□□□ -1.24
DMD-228ENST00000541735 APBA3O96018 575 aa7.3□□□□□ -1.24
DMD-228ENST00000541735 CATIPQ7Z7H3 387 aa7.3□□□□□ -1.24
DMD-228ENST00000541735 NUDT16Q96DE0 195 aaKnown RBP7.3□□□□□ -1.24
DMD-228ENST00000541735 CDC5LQ99459 802 aaKnown RBP7.3□□□□□ -1.24
DMD-228ENST00000541735 ADAMTS8Q9UP79 889 aa7.3□□□□□ -1.24
DMD-228ENST00000541735 NIP7Q9Y221 180 aaKnown RBP eCLIP7.3□□□□□ -1.24
DMD-228ENST00000541735 ANXA1P04083 346 aa7.3□□□□□ -1.24
DMD-228ENST00000541735 TCIRG1Q13488 830 aa7.3□□□□□ -1.24
DMD-228ENST00000541735 PPP2R5DQ14738 602 aa7.3□□□□□ -1.24
DMD-228ENST00000541735 PPP1R42Q7Z4L9 355 aa7.3□□□□□ -1.24
DMD-228ENST00000541735 SPATA32Q96LK8 384 aa7.3□□□□□ -1.24
DMD-228ENST00000541735 ZC3H12CQ9C0D7 883 aaKnown RBP7.3□□□□□ -1.24
DMD-228ENST00000541735 PICK1Q9NRD5 415 aa7.3□□□□□ -1.24
DMD-228ENST00000541735 RBM25P49756 843 aaKnown RBP7.3□□□□□ -1.24
DMD-228ENST00000541735 ALS2CR12Q96Q35 445 aa7.3□□□□□ -1.24
DMD-228ENST00000541735 SCAPERQ9BY12 1400 aa7.3□□□□□ -1.24
DMD-228ENST00000541735 F6X3S4 739 aa7.3□□□□□ -1.24
DMD-228ENST00000541735 ZNF213O14771 459 aa7.3□□□□□ -1.24
DMD-228ENST00000541735 HMGB2P26583 209 aaKnown RBP7.3□□□□□ -1.24
DMD-228ENST00000541735 KIF5BP33176 963 aa7.3□□□□□ -1.24
DMD-228ENST00000541735 DDB1Q16531 1140 aa7.3□□□□□ -1.24
DMD-228ENST00000541735 CFAP100Q494V2 611 aa7.3□□□□□ -1.24
DMD-228ENST00000541735 HEATR3Q7Z4Q2 680 aa7.3□□□□□ -1.24
DMD-228ENST00000541735 CCDC102AQ96A19 550 aa7.3□□□□□ -1.24
DMD-228ENST00000541735 SAP30BPQ9UHR5 308 aaKnown RBP7.3□□□□□ -1.24
DMD-228ENST00000541735 CCDC175P0C221 793 aa7.3□□□□□ -1.24
DMD-228ENST00000541735 IFFO1Q0D2I5 559 aa7.3□□□□□ -1.24
DMD-228ENST00000541735 IFRD2Q12894 506 aaPredicted RBP7.3□□□□□ -1.24
DMD-228ENST00000541735 TMCO4Q5TGY1 634 aa7.3□□□□□ -1.24
DMD-228ENST00000541735 PAIP2Q9BPZ3 127 aaKnown RBP7.3□□□□□ -1.24
DMD-228ENST00000541735 ABT1Q9ULW3 272 aaKnown RBP7.3□□□□□ -1.24
DMD-228ENST00000541735 STX6O43752 255 aa7.29□□□□□ -1.24
DMD-228ENST00000541735 EIF6P56537 245 aaKnown RBP7.29□□□□□ -1.24
DMD-228ENST00000541735 SPA17Q15506 151 aa7.29□□□□□ -1.24
DMD-228ENST00000541735 FKBP15Q5T1M5 1219 aa7.29□□□□□ -1.24
DMD-228ENST00000541735 FAM200AQ8TCP9 573 aa7.29□□□□□ -1.24
DMD-228ENST00000541735 SRRTQ9BXP5 876 aaKnown RBP7.29□□□□□ -1.24
DMD-228ENST00000541735 BAZ1AQ9NRL2 1556 aaPredicted RBP7.29□□□□□ -1.24
DMD-228ENST00000541735 GOLIM4O00461 696 aa7.29□□□□□ -1.24
DMD-228ENST00000541735 KIAA0754O94854 1291 aa7.29□□□□□ -1.24
DMD-228ENST00000541735 GOLGA8AA7E2F4 631 aa7.29□□□□□ -1.24
DMD-228ENST00000541735 GOLGA8BA8MQT2 603 aa7.29□□□□□ -1.24
DMD-228ENST00000541735 SMARCC2Q8TAQ2 1214 aa7.29□□□□□ -1.24
DMD-228ENST00000541735 SMCR8Q8TEV9 937 aaPredicted RBP7.29□□□□□ -1.24
DMD-228ENST00000541735 TSPY26PQ9H489 355 aa7.29□□□□□ -1.24
DMD-228ENST00000541735 PRKAG2Q9UGJ0 569 aa7.29□□□□□ -1.24
DMD-228ENST00000541735 AMOTL2Q9Y2J4 779 aa7.29□□□□□ -1.24
DMD-228ENST00000541735 CCT4P50991 539 aaKnown RBP7.29□□□□□ -1.24
DMD-228ENST00000541735 SSRP1Q08945 709 aaKnown RBP7.29□□□□□ -1.24
DMD-228ENST00000541735 IRAK4Q9NWZ3 460 aa7.29□□□□□ -1.24
DMD-228ENST00000541735 ODF2LQ9ULJ1 636 aa7.29□□□□□ -1.24
DMD-228ENST00000541735 CNTLNQ9NXG0 1405 aa7.29□□□□□ -1.24
DMD-228ENST00000541735 GNPATO15228 680 aa7.29□□□□□ -1.24
DMD-228ENST00000541735 EEF2P13639 858 aaKnown RBP7.29□□□□□ -1.24
DMD-228ENST00000541735 TAF7Q15545 349 aaPredicted RBP7.29□□□□□ -1.24
DMD-228ENST00000541735 CCDC63Q8NA47 563 aa7.29□□□□□ -1.24
DMD-228ENST00000541735 RTCBQ9Y3I0 505 aaKnown RBP7.29□□□□□ -1.24
DMD-228ENST00000541735 PDCP20941 246 aa7.29□□□□□ -1.24
DMD-228ENST00000541735 MTIF2P46199 727 aaKnown RBP7.29□□□□□ -1.24
DMD-228ENST00000541735 IRX5P78411 483 aaPredicted RBP7.29□□□□□ -1.24
DMD-228ENST00000541735 C4orf50Q6ZRC1 276 aa7.29□□□□□ -1.24
DMD-228ENST00000541735 LUZP1Q86V48 1076 aa7.29□□□□□ -1.24
DMD-228ENST00000541735 WASF1Q92558 559 aa7.29□□□□□ -1.24
DMD-228ENST00000541735 FERMT1Q9BQL6 677 aa7.29□□□□□ -1.24
DMD-228ENST00000541735 TRIM6Q9C030 488 aaPredicted RBP7.29□□□□□ -1.24
DMD-228ENST00000541735 PRPF40BQ6NWY9 871 aaKnown RBP7.28□□□□□ -1.24
DMD-228ENST00000541735 LEKR1Q6ZMV7 388 aa7.28□□□□□ -1.24
DMD-228ENST00000541735 MAEAQ7L5Y9 396 aa7.28□□□□□ -1.24
DMD-228ENST00000541735 CCDC83Q8IWF9 413 aa7.28□□□□□ -1.24
DMD-228ENST00000541735 KCNH5Q8NCM2 988 aa7.28□□□□□ -1.24
DMD-228ENST00000541735 PAGR1Q9BTK6 254 aa7.28□□□□□ -1.24
DMD-228ENST00000541735 PFDN4Q9NQP4 134 aa7.28□□□□□ -1.24
DMD-228ENST00000541735 CEP131Q9UPN4 1083 aa7.28□□□□□ -1.24
DMD-228ENST00000541735 FNDC3AQ9Y2H6 1198 aaKnown RBP7.28□□□□□ -1.24
DMD-228ENST00000541735 NAIPQ13075 1403 aa7.28□□□□□ -1.24
DMD-228ENST00000541735 SBNO2Q9Y2G9 1366 aa7.28□□□□□ -1.24
DMD-228ENST00000541735 TBCAO75347 108 aaKnown RBP7.28□□□□□ -1.24
DMD-228ENST00000541735 SLU7O95391 586 aaKnown RBP7.28□□□□□ -1.24
DMD-228ENST00000541735 ACTN2P35609 894 aa7.28□□□□□ -1.24
DMD-228ENST00000541735 ARID5AQ03989 594 aa7.28□□□□□ -1.24
DMD-228ENST00000541735 KIF22Q14807 665 aa7.28□□□□□ -1.24
DMD-228ENST00000541735 HELBQ8NG08 1087 aaPredicted RBP7.28□□□□□ -1.24
DMD-228ENST00000541735 ZNF692Q9BU19 519 aaPredicted RBP7.28□□□□□ -1.24
DMD-228ENST00000541735 RAB34Q9BZG1 259 aa7.28□□□□□ -1.24
DMD-228ENST00000541735 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.28□□□□□ -1.24
DMD-228ENST00000541735 TMOD4Q9NZQ9 345 aa7.28□□□□□ -1.24
DMD-228ENST00000541735 GIGYF2Q6Y7W6 1299 aaKnown RBP7.28□□□□□ -1.24
DMD-228ENST00000541735 MICU3Q86XE3 530 aa7.28□□□□□ -1.24
DMD-228ENST00000541735 CALML4Q96GE6 196 aa7.28□□□□□ -1.24
DMD-228ENST00000541735 CDCA7LQ96GN5 454 aa7.28□□□□□ -1.24
DMD-228ENST00000541735 PHF8Q9UPP1 1060 aa7.28□□□□□ -1.24
DMD-228ENST00000541735 TTLL3Q9Y4R7 772 aa7.28□□□□□ -1.24
DMD-228ENST00000541735 GOLGA6L7A0A1B0GV03 622 aa7.28□□□□□ -1.24
DMD-228ENST00000541735 DDX39AO00148 427 aaKnown RBP7.28□□□□□ -1.24
DMD-228ENST00000541735 NUP88Q99567 741 aaPredicted RBP7.28□□□□□ -1.24
DMD-228ENST00000541735 RIOK3O14730 519 aaKnown RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms