RNA–Protein interactions for RNA: ENST00000541588.5

RAB6A-207, Transcript of RAB6A, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB6A, Length 758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-207ENST00000541588 ST5P78524 1137 aa24.43■■□□□ 1.5
RAB6A-207ENST00000541588 COL13A1Q5TAT6 717 aaPredicted RBP24.43■■□□□ 1.5
RAB6A-207ENST00000541588 USP16Q9Y5T5 823 aa24.43■■□□□ 1.5
RAB6A-207ENST00000541588 CNKSR1Q969H4 720 aa24.42■■□□□ 1.5
RAB6A-207ENST00000541588 PRAMEF22A3QJZ6 481 aa24.41■■□□□ 1.5
RAB6A-207ENST00000541588 STYK1Q6J9G0 422 aa24.41■■□□□ 1.5
RAB6A-207ENST00000541588 TAOK3Q9H2K8 898 aa24.41■■□□□ 1.5
RAB6A-207ENST00000541588 SRGNP10124 158 aa24.4■■□□□ 1.5
RAB6A-207ENST00000541588 PRPF40BQ6NWY9 871 aaKnown RBP24.4■■□□□ 1.5
RAB6A-207ENST00000541588 NUDCQ9Y266 331 aa24.4■■□□□ 1.5
RAB6A-207ENST00000541588 LTBP3Q9NS15 1303 aa24.39■■□□□ 1.5
RAB6A-207ENST00000541588 MCM10Q7L590 875 aa24.39■■□□□ 1.49
RAB6A-207ENST00000541588 RTF1Q92541 710 aaKnown RBP24.39■■□□□ 1.49
RAB6A-207ENST00000541588 MASTLQ96GX5 879 aa24.39■■□□□ 1.49
RAB6A-207ENST00000541588 U2AF1L5P0DN76 240 aaPredicted RBP24.38■■□□□ 1.49
RAB6A-207ENST00000541588 U2AF1Q01081 240 aaKnown RBP eCLIP24.38■■□□□ 1.494e-9■■□□□ 12.7
RAB6A-207ENST00000541588 NBPF5PQ86XG9 351 aaPredicted RBP24.38■■□□□ 1.49
RAB6A-207ENST00000541588 ARFGEF2Q9Y6D5 1785 aa24.37■■□□□ 1.49
RAB6A-207ENST00000541588 SNRPA1P09661 255 aaKnown RBP24.37■■□□□ 1.49
RAB6A-207ENST00000541588 SOGA3Q5TF21 947 aa24.36■■□□□ 1.49
RAB6A-207ENST00000541588 CLEC4GQ6UXB4 293 aa24.36■■□□□ 1.49
RAB6A-207ENST00000541588 ZNF652Q9Y2D9 606 aa24.36■■□□□ 1.49
RAB6A-207ENST00000541588 DDNO94850 711 aaPredicted RBP24.35■■□□□ 1.49
RAB6A-207ENST00000541588 DCTN1Q14203 1278 aa24.35■■□□□ 1.49
RAB6A-207ENST00000541588 PPP2R1AP30153 589 aa24.34■■□□□ 1.49
RAB6A-207ENST00000541588 NBPF26B4DH59 902 aa24.32■■□□□ 1.48
RAB6A-207ENST00000541588 HSPA1AP0DMV8 641 aaKnown RBP24.32■■□□□ 1.48
RAB6A-207ENST00000541588 HSPA1BP0DMV9 641 aaKnown RBP24.32■■□□□ 1.48
RAB6A-207ENST00000541588 CHADLQ6NUI6 762 aa24.32■■□□□ 1.48
RAB6A-207ENST00000541588 NBPF10Q6P3W6 841 aaKnown RBP24.32■■□□□ 1.48
RAB6A-207ENST00000541588 NBPF15Q8N660 670 aa24.32■■□□□ 1.48
RAB6A-207ENST00000541588 NIP7Q9Y221 180 aaKnown RBP eCLIP24.32■■□□□ 1.48
RAB6A-207ENST00000541588 POTEIP0CG38 1075 aa24.31■■□□□ 1.48
RAB6A-207ENST00000541588 POTEJP0CG39 1038 aa24.31■■□□□ 1.48
RAB6A-207ENST00000541588 NPR1P16066 1061 aa24.31■■□□□ 1.48
RAB6A-207ENST00000541588 TNS4Q8IZW8 715 aa24.31■■□□□ 1.48
RAB6A-207ENST00000541588 C7orf43Q8WVR3 580 aa24.31■■□□□ 1.48
RAB6A-207ENST00000541588 FAM177BA6PVY3 158 aa24.3■■□□□ 1.48
RAB6A-207ENST00000541588 CCDC93Q567U6 631 aa24.3■■□□□ 1.48
RAB6A-207ENST00000541588 TPTE2Q6XPS3 522 aa24.3■■□□□ 1.48
RAB6A-207ENST00000541588 CAPN15O75808 1086 aa24.29■■□□□ 1.48
RAB6A-207ENST00000541588 HTATSF1O43719 755 aaKnown RBP24.28■■□□□ 1.48
RAB6A-207ENST00000541588 KLRG2A4D1S0 409 aaPredicted RBP24.27■■□□□ 1.48
RAB6A-207ENST00000541588 TAF7Q15545 349 aaPredicted RBP24.27■■□□□ 1.48
RAB6A-207ENST00000541588 CREBZFQ9NS37 354 aa24.27■■□□□ 1.48
RAB6A-207ENST00000541588 MIS18AQ9NYP9 233 aa24.27■■□□□ 1.48
RAB6A-207ENST00000541588 IQCA1LA6NCM1 817 aa24.26■■□□□ 1.47
RAB6A-207ENST00000541588 RGL2O15211 777 aa24.26■■□□□ 1.47
RAB6A-207ENST00000541588 FKBP4Q02790 459 aaKnown RBP eCLIP24.26■■□□□ 1.47
RAB6A-207ENST00000541588 HLFQ16534 295 aa24.26■■□□□ 1.47
RAB6A-207ENST00000541588 OLFM4Q6UX06 510 aa24.26■■□□□ 1.47
RAB6A-207ENST00000541588 ZNF277Q9NRM2 450 aaPredicted RBP24.26■■□□□ 1.47
RAB6A-207ENST00000541588 SCN4AP35499 1836 aa24.26■■□□□ 1.47
RAB6A-207ENST00000541588 MKRN1Q9UHC7 482 aaKnown RBP24.25■■□□□ 1.47
RAB6A-207ENST00000541588 GTF2E1P29083 439 aaPredicted RBP24.24■■□□□ 1.47
RAB6A-207ENST00000541588 L3MBTL3Q96JM7 780 aaPredicted RBP24.24■■□□□ 1.47
RAB6A-207ENST00000541588 TAF1DQ9H5J8 278 aaPredicted RBP24.24■■□□□ 1.47
RAB6A-207ENST00000541588 LAMB4A4D0S4 1761 aa24.24■■□□□ 1.47
RAB6A-207ENST00000541588 LDHDQ86WU2 507 aa24.23■■□□□ 1.47
RAB6A-207ENST00000541588 NGEFQ8N5V2 710 aa24.23■■□□□ 1.47
RAB6A-207ENST00000541588 ZNF541Q9H0D2 1346 aa24.23■■□□□ 1.47
RAB6A-207ENST00000541588 DLG5Q8TDM6 1919 aa24.22■■□□□ 1.47
RAB6A-207ENST00000541588 RTKN2Q8IZC4 609 aa24.22■■□□□ 1.47
RAB6A-207ENST00000541588 ALDH1B1P30837 517 aa24.21■■□□□ 1.47
RAB6A-207ENST00000541588 NEFMP07197 916 aa24.2■■□□□ 1.46
RAB6A-207ENST00000541588 EAPPQ56P03 285 aaPredicted RBP24.2■■□□□ 1.46
RAB6A-207ENST00000541588 NUP98P52948 1817 aa24.19■■□□□ 1.46
RAB6A-207ENST00000541588 PASKQ96RG2 1323 aa24.19■■□□□ 1.46
RAB6A-207ENST00000541588 NUTM1Q86Y26 1132 aa24.19■■□□□ 1.46
RAB6A-207ENST00000541588 SYNE4Q8N205 404 aa24.19■■□□□ 1.46
RAB6A-207ENST00000541588 ABCC12Q96J65 1359 aa24.18■■□□□ 1.46
RAB6A-207ENST00000541588 IARSP41252 1262 aaKnown RBP24.18■■□□□ 1.46
RAB6A-207ENST00000541588 PNISRQ8TF01 805 aaKnown RBP24.18■■□□□ 1.46
RAB6A-207ENST00000541588 HACL1Q9UJ83 578 aa24.18■■□□□ 1.46
RAB6A-207ENST00000541588 RRP7AQ9Y3A4 280 aaKnown RBP24.18■■□□□ 1.46
RAB6A-207ENST00000541588 KDM3BQ7LBC6 1761 aa24.18■■□□□ 1.46
RAB6A-207ENST00000541588 NYXQ9GZU5 481 aa24.17■■□□□ 1.46
RAB6A-207ENST00000541588 CLEC11AQ9Y240 323 aa24.17■■□□□ 1.46
RAB6A-207ENST00000541588 CNTNAP1P78357 1384 aa24.16■■□□□ 1.46
RAB6A-207ENST00000541588 MAP3K15Q6ZN16 1313 aa24.16■■□□□ 1.46
RAB6A-207ENST00000541588 ERVV-1B6SEH8 477 aa24.16■■□□□ 1.46
RAB6A-207ENST00000541588 EPHX2P34913 555 aa24.16■■□□□ 1.46
RAB6A-207ENST00000541588 RNF123Q5XPI4 1314 aa24.15■■□□□ 1.46
RAB6A-207ENST00000541588 FZD9O00144 591 aa24.15■■□□□ 1.46
RAB6A-207ENST00000541588 ITGBL1O95965 494 aaPredicted RBP24.15■■□□□ 1.46
RAB6A-207ENST00000541588 MYL6BP14649 208 aa24.15■■□□□ 1.46
RAB6A-207ENST00000541588 EIF4A1P60842 406 aaKnown RBP24.15■■□□□ 1.46
RAB6A-207ENST00000541588 CRY2Q49AN0 593 aa24.15■■□□□ 1.46
RAB6A-207ENST00000541588 KIF6Q6ZMV9 814 aa24.15■■□□□ 1.46
RAB6A-207ENST00000541588 TTLL7Q6ZT98 887 aa24.15■■□□□ 1.46
RAB6A-207ENST00000541588 THUMPD2Q9BTF0 503 aaKnown RBP24.15■■□□□ 1.46
RAB6A-207ENST00000541588 GPTP24298 496 aa24.14■■□□□ 1.45
RAB6A-207ENST00000541588 TMEM88BA6NKF7 163 aa24.13■■□□□ 1.45
RAB6A-207ENST00000541588 RPGRQ92834 1020 aaKnown RBP24.13■■□□□ 1.45
RAB6A-207ENST00000541588 PLEKHF1Q96S99 279 aa24.13■■□□□ 1.45
RAB6A-207ENST00000541588 PSMD1Q99460 953 aa24.13■■□□□ 1.45
RAB6A-207ENST00000541588 ZBTB3Q9H5J0 574 aa24.13■■□□□ 1.45
RAB6A-207ENST00000541588 SNED1Q8TER0 1413 aa24.12■■□□□ 1.45
RAB6A-207ENST00000541588 ADAMTSL1Q8N6G6 1762 aa24.12■■□□□ 1.45
RAB6A-207ENST00000541588 NFE2L2Q16236 605 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms