RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 LRRC69Q6ZNQ3 347 aa7.69□□□□□ -1.18
SNHG1-217ENST00000541578 RHPN1Q8TCX5 695 aa7.69□□□□□ -1.18
SNHG1-217ENST00000541578 C2orf49Q9BVC5 232 aaPredicted RBP7.69□□□□□ -1.18
SNHG1-217ENST00000541578 PHACTR1Q9C0D0 580 aa7.69□□□□□ -1.18
SNHG1-217ENST00000541578 ADAMTS8Q9UP79 889 aa7.69□□□□□ -1.18
SNHG1-217ENST00000541578 ARHGEF15O94989 841 aa7.68□□□□□ -1.18
SNHG1-217ENST00000541578 MAPTP10636 758 aaKnown RBP7.68□□□□□ -1.18
SNHG1-217ENST00000541578 BCRP11274 1271 aa7.68□□□□□ -1.18
SNHG1-217ENST00000541578 SRPK2P78362 688 aaKnown RBP7.68□□□□□ -1.18
SNHG1-217ENST00000541578 ACDQ96AP0 544 aa7.68□□□□□ -1.18
SNHG1-217ENST00000541578 KLRG1Q96E93 195 aa7.68□□□□□ -1.18
SNHG1-217ENST00000541578 ENAMQ9NRM1 1142 aa7.68□□□□□ -1.18
SNHG1-217ENST00000541578 NOVA2Q9UNW9 492 aaKnown RBP7.68□□□□□ -1.18
SNHG1-217ENST00000541578 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.67□□□□□ -1.18
SNHG1-217ENST00000541578 KHNYNO15037 678 aaKnown RBP7.67□□□□□ -1.18
SNHG1-217ENST00000541578 FAM157BP0CG42 384 aa7.67□□□□□ -1.18
SNHG1-217ENST00000541578 IGFBP4P22692 258 aa7.67□□□□□ -1.18
SNHG1-217ENST00000541578 OXCT2Q9BYC2 517 aaPredicted RBP7.67□□□□□ -1.18
SNHG1-217ENST00000541578 ANKIB1Q9P2G1 1089 aa7.67□□□□□ -1.18
SNHG1-217ENST00000541578 DCDC2BA2VCK2 349 aa7.66□□□□□ -1.18
SNHG1-217ENST00000541578 C2CD2LO14523 706 aa7.66□□□□□ -1.18
SNHG1-217ENST00000541578 ELOAQ14241 798 aaKnown RBP7.66□□□□□ -1.18
SNHG1-217ENST00000541578 ALDH16A1Q8IZ83 802 aa7.66□□□□□ -1.18
SNHG1-217ENST00000541578 ATG7O95352 703 aa7.65□□□□□ -1.18
SNHG1-217ENST00000541578 CD33P20138 364 aa7.65□□□□□ -1.18
SNHG1-217ENST00000541578 WEE1P30291 646 aa7.65□□□□□ -1.18
SNHG1-217ENST00000541578 LAMC2Q13753 1193 aa7.65□□□□□ -1.18
SNHG1-217ENST00000541578 PBXIP1Q96AQ6 731 aa7.65□□□□□ -1.18
SNHG1-217ENST00000541578 NGLY1Q96IV0 654 aa7.65□□□□□ -1.18
SNHG1-217ENST00000541578 LRRC4BQ9NT99 713 aa7.65□□□□□ -1.18
SNHG1-217ENST00000541578 GDF2Q9UK05 429 aaPredicted RBP7.65□□□□□ -1.18
SNHG1-217ENST00000541578 ACIN1Q9UKV3 1341 aaKnown RBP7.64□□□□□ -1.19
SNHG1-217ENST00000541578 EFSO43281 561 aa7.64□□□□□ -1.19
SNHG1-217ENST00000541578 MARSP56192 900 aaKnown RBP7.64□□□□□ -1.19
SNHG1-217ENST00000541578 FAM182BQ5T319 152 aa7.64□□□□□ -1.19
SNHG1-217ENST00000541578 MARK1Q9P0L2 795 aa7.64□□□□□ -1.19
SNHG1-217ENST00000541578 OIP5O43482 229 aa7.63□□□□□ -1.19
SNHG1-217ENST00000541578 HIF1AQ16665 826 aa7.63□□□□□ -1.19
SNHG1-217ENST00000541578 SWI5Q1ZZU3 235 aa7.63□□□□□ -1.19
SNHG1-217ENST00000541578 GOLGA6L1Q8N7Z2 621 aa7.63□□□□□ -1.19
SNHG1-217ENST00000541578 NEDD1Q8NHV4 660 aa7.63□□□□□ -1.19
SNHG1-217ENST00000541578 VTI1AQ96AJ9 217 aa7.63□□□□□ -1.19
SNHG1-217ENST00000541578 SUSD3Q96L08 255 aa7.63□□□□□ -1.19
SNHG1-217ENST00000541578 ZMIZ1Q9ULJ6 1067 aa7.63□□□□□ -1.19
SNHG1-217ENST00000541578 PRR12Q9ULL5 1215 aa7.63□□□□□ -1.19
SNHG1-217ENST00000541578 FOXO3O43524 673 aa7.62□□□□□ -1.19
SNHG1-217ENST00000541578 ARAFP10398 606 aa7.62□□□□□ -1.19
SNHG1-217ENST00000541578 RTN1Q16799 776 aa7.62□□□□□ -1.19
SNHG1-217ENST00000541578 CCDC82Q8N4S0 544 aa7.62□□□□□ -1.19
SNHG1-217ENST00000541578 ZNF280CQ8ND82 737 aa7.62□□□□□ -1.19
SNHG1-217ENST00000541578 HSH2DQ96JZ2 352 aa7.62□□□□□ -1.19
SNHG1-217ENST00000541578 CEP63Q96MT8 703 aa7.62□□□□□ -1.19
SNHG1-217ENST00000541578 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.62□□□□□ -1.191e-323■■■■□ 19.6
SNHG1-217ENST00000541578 STRN4Q9NRL3 753 aa7.62□□□□□ -1.19
SNHG1-217ENST00000541578 HCN2Q9UL51 889 aa7.62□□□□□ -1.19
SNHG1-217ENST00000541578 GALNT6Q8NCL4 622 aa7.61□□□□□ -1.19
SNHG1-217ENST00000541578 STK32AQ8WU08 396 aa7.61□□□□□ -1.19
SNHG1-217ENST00000541578 PRIMPOLQ96LW4 560 aa7.61□□□□□ -1.19
SNHG1-217ENST00000541578 GGA1Q9UJY5 639 aa7.61□□□□□ -1.19
SNHG1-217ENST00000541578 DNMT3AQ9Y6K1 912 aaPredicted RBP7.61□□□□□ -1.19
SNHG1-217ENST00000541578 NEURL1BA8MQ27 555 aa7.6□□□□□ -1.19
SNHG1-217ENST00000541578 SFSWAPQ12872 951 aaKnown RBP7.6□□□□□ -1.19
SNHG1-217ENST00000541578 SLCO4C1Q6ZQN7 724 aa7.6□□□□□ -1.19
SNHG1-217ENST00000541578 EDARADDQ8WWZ3 215 aa7.6□□□□□ -1.19
SNHG1-217ENST00000541578 SCARF2Q96GP6 870 aaPredicted RBP7.6□□□□□ -1.19
SNHG1-217ENST00000541578 C1orf115Q9H7X2 142 aa7.6□□□□□ -1.19
SNHG1-217ENST00000541578 RNF225M0QZC1 329 aaPredicted RBP7.59□□□□□ -1.19
SNHG1-217ENST00000541578 PRMT3O60678 531 aa7.59□□□□□ -1.19
SNHG1-217ENST00000541578 ADH6P28332 368 aa7.59□□□□□ -1.19
SNHG1-217ENST00000541578 FAM69CQ0P6D2 419 aa7.59□□□□□ -1.19
SNHG1-217ENST00000541578 ZNF468Q5VIY5 522 aaPredicted RBP7.59□□□□□ -1.19
SNHG1-217ENST00000541578 ARID3AQ99856 593 aa7.59□□□□□ -1.19
SNHG1-217ENST00000541578 BRD7Q9NPI1 651 aa7.59□□□□□ -1.19
SNHG1-217ENST00000541578 AVENQ9NQS1 362 aaPredicted RBP7.59□□□□□ -1.19
SNHG1-217ENST00000541578 PCBP4P57723 403 aaKnown RBP7.58□□□□□ -1.2
SNHG1-217ENST00000541578 TYRO3Q06418 890 aa7.58□□□□□ -1.2
SNHG1-217ENST00000541578 KCNMA1Q12791 1236 aa7.58□□□□□ -1.2
SNHG1-217ENST00000541578 TMEM164Q5U3C3 297 aa7.58□□□□□ -1.2
SNHG1-217ENST00000541578 C1orf229Q6ZS94 237 aaPredicted RBP7.58□□□□□ -1.2
SNHG1-217ENST00000541578 BTLAQ7Z6A9 289 aa7.58□□□□□ -1.2
SNHG1-217ENST00000541578 KLF15Q9UIH9 416 aa7.58□□□□□ -1.2
SNHG1-217ENST00000541578 KCNH4Q9UQ05 1017 aa7.58□□□□□ -1.2
SNHG1-217ENST00000541578 SHISA8B8ZZ34 492 aa7.57□□□□□ -1.2
SNHG1-217ENST00000541578 EPXP11678 715 aa7.57□□□□□ -1.2
SNHG1-217ENST00000541578 KCNQ4P56696 695 aa7.57□□□□□ -1.2
SNHG1-217ENST00000541578 IER5Q5VY09 327 aa7.57□□□□□ -1.2
SNHG1-217ENST00000541578 PODNQ7Z5L7 613 aa7.57□□□□□ -1.2
SNHG1-217ENST00000541578 BEND7Q8N7W2 519 aaPredicted RBP7.57□□□□□ -1.2
SNHG1-217ENST00000541578 KLK14Q9P0G3 267 aa7.57□□□□□ -1.2
SNHG1-217ENST00000541578 TGFBR3LH3BV60 316 aa7.56□□□□□ -1.2
SNHG1-217ENST00000541578 PPP1R15AO75807 674 aaPredicted RBP7.56□□□□□ -1.2
SNHG1-217ENST00000541578 AMPD1P23109 780 aa7.56□□□□□ -1.2
SNHG1-217ENST00000541578 SPEM2Q0P670 501 aa7.56□□□□□ -1.2
SNHG1-217ENST00000541578 FKBP5Q13451 457 aaPredicted RBP7.56□□□□□ -1.2
SNHG1-217ENST00000541578 GRIN2CQ14957 1233 aa7.56□□□□□ -1.2
SNHG1-217ENST00000541578 OCLNQ16625 522 aa7.56□□□□□ -1.2
SNHG1-217ENST00000541578 C11orf91Q3C1V1 193 aa7.56□□□□□ -1.2
SNHG1-217ENST00000541578 MYO19Q96H55 970 aa7.56□□□□□ -1.2
SNHG1-217ENST00000541578 QTRT2Q9H974 415 aaKnown RBP7.56□□□□□ -1.2
SNHG1-217ENST00000541578 BCS1LQ9Y276 419 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms