RNA–Protein interactions for RNA: ENST00000541272.1

UBC-209, Transcript of ubiquitin C, humanhuman

TSL 5

Gene UBC, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-209ENST00000541272 C7orf43Q8WVR3 580 aa15.87■□□□□ 0.13
UBC-209ENST00000541272 FMNL2Q96PY5 1086 aa15.87■□□□□ 0.13
UBC-209ENST00000541272 MKRN1Q9UHC7 482 aaKnown RBP15.87■□□□□ 0.13
UBC-209ENST00000541272 RASSF10A6NK89 507 aa15.86■□□□□ 0.13
UBC-209ENST00000541272 GNAT3A8MTJ3 354 aa15.86■□□□□ 0.13
UBC-209ENST00000541272 FOXN1O15353 648 aa15.86■□□□□ 0.13
UBC-209ENST00000541272 MAP2K1Q02750 393 aaPredicted RBP15.86■□□□□ 0.13
UBC-209ENST00000541272 ZNF652Q9Y2D9 606 aa15.86■□□□□ 0.13
UBC-209ENST00000541272 CAMTA2O94983 1202 aa15.85■□□□□ 0.13
UBC-209ENST00000541272 NPR1P16066 1061 aa15.85■□□□□ 0.13
UBC-209ENST00000541272 FKBP4Q02790 459 aaKnown RBP eCLIP15.85■□□□□ 0.13
UBC-209ENST00000541272 BICDL1Q6ZP65 573 aa15.85■□□□□ 0.13
UBC-209ENST00000541272 ZNF496Q96IT1 587 aaPredicted RBP15.85■□□□□ 0.13
UBC-209ENST00000541272 VIRMAQ69YN4 1812 aaKnown RBP15.84■□□□□ 0.13
UBC-209ENST00000541272 NPHP1O15259 732 aa15.84■□□□□ 0.13
UBC-209ENST00000541272 SLC34A2O95436 690 aa15.84■□□□□ 0.13
UBC-209ENST00000541272 HSPA5P11021 654 aaKnown RBP15.84■□□□□ 0.13
UBC-209ENST00000541272 ALDH1B1P30837 517 aa15.84■□□□□ 0.13
UBC-209ENST00000541272 CC2D2BQ6DHV5 1058 aa15.84■□□□□ 0.13
UBC-209ENST00000541272 TPTE2Q6XPS3 522 aa15.84■□□□□ 0.13
UBC-209ENST00000541272 HACL1Q9UJ83 578 aa15.84■□□□□ 0.13
UBC-209ENST00000541272 CEMIPQ8WUJ3 1361 aa15.84■□□□□ 0.13
UBC-209ENST00000541272 NPC1L1Q9UHC9 1359 aa15.84■□□□□ 0.13
UBC-209ENST00000541272 COL11A2P13942 1736 aaPredicted RBP15.82■□□□□ 0.12
UBC-209ENST00000541272 FZD9O00144 591 aa15.82■□□□□ 0.12
UBC-209ENST00000541272 HMOX1P09601 288 aa15.82■□□□□ 0.12
UBC-209ENST00000541272 VEGFBP49765 207 aa15.82■□□□□ 0.12
UBC-209ENST00000541272 DEFB115Q30KQ5 88 aa15.82■□□□□ 0.12
UBC-209ENST00000541272 GPC2Q8N158 579 aa15.82■□□□□ 0.12
UBC-209ENST00000541272 IL17REQ8NFR9 667 aa15.82■□□□□ 0.12
UBC-209ENST00000541272 TBC1D2BQ9UPU7 963 aa15.82■□□□□ 0.12
UBC-209ENST00000541272 DZIP3Q86Y13 1208 aaKnown RBP15.81■□□□□ 0.12
UBC-209ENST00000541272 ADAMTSL1Q8N6G6 1762 aa15.81■□□□□ 0.12
UBC-209ENST00000541272 PSMD1Q99460 953 aa15.81■□□□□ 0.12
UBC-209ENST00000541272 PCDH10Q9P2E7 1040 aa15.81■□□□□ 0.12
UBC-209ENST00000541272 SLX4Q8IY92 1834 aa15.8■□□□□ 0.12
UBC-209ENST00000541272 SIPA1L3O60292 1781 aaPredicted RBP15.8■□□□□ 0.12
UBC-209ENST00000541272 PER1O15534 1290 aaPredicted RBP15.8■□□□□ 0.12
UBC-209ENST00000541272 POTEIP0CG38 1075 aa15.8■□□□□ 0.12
UBC-209ENST00000541272 POTEJP0CG39 1038 aa15.8■□□□□ 0.12
UBC-209ENST00000541272 EPHX2P34913 555 aa15.8■□□□□ 0.12
UBC-209ENST00000541272 NBPF5PQ86XG9 351 aaPredicted RBP15.8■□□□□ 0.12
UBC-209ENST00000541272 ECE1P42892 770 aa15.79■□□□□ 0.12
UBC-209ENST00000541272 RGS19P49795 217 aa15.79■□□□□ 0.12
UBC-209ENST00000541272 CNTROBQ8N137 903 aa15.79■□□□□ 0.12
UBC-209ENST00000541272 VPS33BQ9H267 617 aa15.79■□□□□ 0.12
UBC-209ENST00000541272 BCORQ6W2J9 1755 aa15.79■□□□□ 0.12
UBC-209ENST00000541272 A1BGP04217 495 aa15.78■□□□□ 0.12
UBC-209ENST00000541272 BTBD11A6QL63 1104 aa15.77■□□□□ 0.12
UBC-209ENST00000541272 HTATSF1O43719 755 aaKnown RBP15.77■□□□□ 0.12
UBC-209ENST00000541272 SNRPA1P09661 255 aaKnown RBP15.77■□□□□ 0.12
UBC-209ENST00000541272 IARSP41252 1262 aaKnown RBP15.77■□□□□ 0.12
UBC-209ENST00000541272 LBX1P52954 281 aa15.77■□□□□ 0.12
UBC-209ENST00000541272 JDP2Q8WYK2 163 aa15.77■□□□□ 0.12
UBC-209ENST00000541272 ZNF219Q9P2Y4 722 aaPredicted RBP15.77■□□□□ 0.12
UBC-209ENST00000541272 WDR33Q9C0J8 1336 aaKnown RBP15.76■□□□□ 0.11
UBC-209ENST00000541272 CA12O43570 354 aa15.76■□□□□ 0.11
UBC-209ENST00000541272 HSPA8P11142 646 aaKnown RBP15.76■□□□□ 0.11
UBC-209ENST00000541272 NYXQ9GZU5 481 aa15.76■□□□□ 0.11
UBC-209ENST00000541272 CLEC11AQ9Y240 323 aa15.76■□□□□ 0.11
UBC-209ENST00000541272 MAP2K2P36507 400 aa15.75■□□□□ 0.11
UBC-209ENST00000541272 CRY2Q49AN0 593 aa15.75■□□□□ 0.11
UBC-209ENST00000541272 EAPPQ56P03 285 aaPredicted RBP15.75■□□□□ 0.11
UBC-209ENST00000541272 ABHD8Q96I13 439 aa15.75■□□□□ 0.11
UBC-209ENST00000541272 HHIPL1Q96JK4 782 aa15.75■□□□□ 0.11
UBC-209ENST00000541272 BEGAINQ9BUH8 593 aa15.75■□□□□ 0.11
UBC-209ENST00000541272 ZNF330Q9Y3S2 320 aaPredicted RBP15.75■□□□□ 0.11
UBC-209ENST00000541272 RIC1Q4ADV7 1423 aa15.75■□□□□ 0.11
UBC-209ENST00000541272 EIF6P56537 245 aaKnown RBP15.74■□□□□ 0.11
UBC-209ENST00000541272 USP50Q70EL3 339 aaPredicted RBP15.74■□□□□ 0.11
UBC-209ENST00000541272 SYNE4Q8N205 404 aa15.74■□□□□ 0.11
UBC-209ENST00000541272 DDX21Q9NR30 783 aaKnown RBP eCLIP15.74■□□□□ 0.11
UBC-209ENST00000541272 USP16Q9Y5T5 823 aa15.74■□□□□ 0.11
UBC-209ENST00000541272 THSD7BQ9C0I4 1608 aa15.74■□□□□ 0.11
UBC-209ENST00000541272 SNED1Q8TER0 1413 aa15.74■□□□□ 0.11
UBC-209ENST00000541272 KIF7Q2M1P5 1343 aa15.73■□□□□ 0.11
UBC-209ENST00000541272 ZNF541Q9H0D2 1346 aa15.73■□□□□ 0.11
UBC-209ENST00000541272 COL3A1P02461 1466 aaPredicted RBP15.73■□□□□ 0.11
UBC-209ENST00000541272 ERVV-1B6SEH8 477 aa15.73■□□□□ 0.11
UBC-209ENST00000541272 LMOD1P29536 600 aaPredicted RBP15.73■□□□□ 0.11
UBC-209ENST00000541272 HOXA10P31260 410 aaPredicted RBP15.73■□□□□ 0.11
UBC-209ENST00000541272 ZNF277Q9NRM2 450 aaPredicted RBP15.73■□□□□ 0.11
UBC-209ENST00000541272 IBTKQ9P2D0 1353 aaPredicted RBP15.73■□□□□ 0.11
UBC-209ENST00000541272 CCDC24Q8N4L8 307 aa15.72■□□□□ 0.11
UBC-209ENST00000541272 NIP7Q9Y221 180 aaKnown RBP eCLIP15.72■□□□□ 0.11
UBC-209ENST00000541272 RTF1Q92541 710 aaKnown RBP15.71■□□□□ 0.11
UBC-209ENST00000541272 ABT1Q9ULW3 272 aaKnown RBP15.71■□□□□ 0.11
UBC-209ENST00000541272 RNF123Q5XPI4 1314 aa15.7■□□□□ 0.1
UBC-209ENST00000541272 MLLT1Q03111 559 aaPredicted RBP15.7■□□□□ 0.1
UBC-209ENST00000541272 CFAP53Q96M91 514 aa15.7■□□□□ 0.1
UBC-209ENST00000541272 CRAMP1Q96RY5 1269 aa15.7■□□□□ 0.1
UBC-209ENST00000541272 NUDCQ9Y266 331 aa15.7■□□□□ 0.1
UBC-209ENST00000541272 CDHR2Q9BYE9 1310 aa15.69■□□□□ 0.1
UBC-209ENST00000541272 U2SURPO15042 1029 aaKnown RBP15.69■□□□□ 0.1
UBC-209ENST00000541272 GTF2E1P29083 439 aaPredicted RBP15.69■□□□□ 0.1
UBC-209ENST00000541272 MAP1SQ66K74 1059 aaPredicted RBP15.69■□□□□ 0.1
UBC-209ENST00000541272 GPR101Q96P66 508 aaPredicted RBP15.69■□□□□ 0.1
UBC-209ENST00000541272 TLL2Q9Y6L7 1015 aa15.69■□□□□ 0.1
UBC-209ENST00000541272 CACNA1SQ13698 1873 aa15.69■□□□□ 0.1
UBC-209ENST00000541272 PNISRQ8TF01 805 aaKnown RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms