RNA–Protein interactions for RNA: ENST00000541242.1

AC005840.4-201, humanhuman

BASIC

Gene AC005840.4, Length 2,494 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.4-201ENST00000541242 LRMPQ12912 555 aa17.78■□□□□ 0.44
AC005840.4-201ENST00000541242 DNM1Q05193 864 aaKnown RBP17.77■□□□□ 0.44
AC005840.4-201ENST00000541242 LTV1Q96GA3 475 aaPredicted RBP17.77■□□□□ 0.44
AC005840.4-201ENST00000541242 PHF8Q9UPP1 1060 aa17.77■□□□□ 0.44
AC005840.4-201ENST00000541242 CPA1P15085 419 aa17.77■□□□□ 0.43
AC005840.4-201ENST00000541242 C14orf37Q86TY3 774 aa17.77■□□□□ 0.43
AC005840.4-201ENST00000541242 RTF1Q92541 710 aaKnown RBP17.77■□□□□ 0.43
AC005840.4-201ENST00000541242 PNMA6EA0A0J9YXQ4 647 aa17.76■□□□□ 0.43
AC005840.4-201ENST00000541242 F13A1P00488 732 aa17.76■□□□□ 0.43
AC005840.4-201ENST00000541242 LRRCC1Q9C099 1032 aa17.76■□□□□ 0.43
AC005840.4-201ENST00000541242 NRBP1Q9UHY1 535 aa17.76■□□□□ 0.43
AC005840.4-201ENST00000541242 TSPYL4Q9UJ04 414 aa17.76■□□□□ 0.43
AC005840.4-201ENST00000541242 NWD1Q149M9 1564 aa17.76■□□□□ 0.43
AC005840.4-201ENST00000541242 AK2P54819 239 aa17.75■□□□□ 0.43
AC005840.4-201ENST00000541242 LARGE1O95461 756 aa17.75■□□□□ 0.43
AC005840.4-201ENST00000541242 OGFRQ9NZT2 677 aa17.75■□□□□ 0.43
AC005840.4-201ENST00000541242 CTNNA3Q9UI47 895 aa17.75■□□□□ 0.43
AC005840.4-201ENST00000541242 CAMK4Q16566 473 aa17.74■□□□□ 0.43
AC005840.4-201ENST00000541242 LUZP1Q86V48 1076 aa17.74■□□□□ 0.43
AC005840.4-201ENST00000541242 PTPRCP08575 1304 aa17.74■□□□□ 0.43
AC005840.4-201ENST00000541242 HSPA4P34932 840 aa17.74■□□□□ 0.43
AC005840.4-201ENST00000541242 RUFY3Q7L099 469 aa17.74■□□□□ 0.43
AC005840.4-201ENST00000541242 CCDC186Q7Z3E2 898 aa17.74■□□□□ 0.43
AC005840.4-201ENST00000541242 IL1RAPL2Q9NP60 686 aa17.74■□□□□ 0.43
AC005840.4-201ENST00000541242 RASEFQ8IZ41 740 aa17.73■□□□□ 0.43
AC005840.4-201ENST00000541242 USHBP1Q8N6Y0 703 aa17.73■□□□□ 0.43
AC005840.4-201ENST00000541242 FEZ1Q99689 392 aa17.73■□□□□ 0.43
AC005840.4-201ENST00000541242 USP54Q70EL1 1684 aa17.73■□□□□ 0.43
AC005840.4-201ENST00000541242 SMC3Q9UQE7 1217 aa17.73■□□□□ 0.43
AC005840.4-201ENST00000541242 GOLGA6L6A8MZA4 724 aa17.72■□□□□ 0.43
AC005840.4-201ENST00000541242 TMEM51Q9NW97 253 aa17.72■□□□□ 0.43
AC005840.4-201ENST00000541242 SNX14Q9Y5W7 946 aa17.72■□□□□ 0.43
AC005840.4-201ENST00000541242 ZNF142P52746 1687 aaPredicted RBP17.72■□□□□ 0.43
AC005840.4-201ENST00000541242 HAP1P54257 671 aaPredicted RBP17.72■□□□□ 0.43
AC005840.4-201ENST00000541242 NUTM1Q86Y26 1132 aa17.72■□□□□ 0.43
AC005840.4-201ENST00000541242 GNAI2P04899 355 aa17.71■□□□□ 0.43
AC005840.4-201ENST00000541242 ESCO1Q5FWF5 840 aa17.71■□□□□ 0.43
AC005840.4-201ENST00000541242 CCDC83Q8IWF9 413 aa17.71■□□□□ 0.43
AC005840.4-201ENST00000541242 DRC7Q8IY82 874 aa17.71■□□□□ 0.43
AC005840.4-201ENST00000541242 TTC14Q96N46 770 aa17.71■□□□□ 0.43
AC005840.4-201ENST00000541242 IL17REQ8NFR9 667 aa17.71■□□□□ 0.42
AC005840.4-201ENST00000541242 GNAT3A8MTJ3 354 aa17.7■□□□□ 0.42
AC005840.4-201ENST00000541242 TPM3P06753 285 aa17.7■□□□□ 0.42
AC005840.4-201ENST00000541242 CCDC192P0DO97 292 aa17.7■□□□□ 0.42
AC005840.4-201ENST00000541242 TNNT1P13805 278 aa17.7■□□□□ 0.42
AC005840.4-201ENST00000541242 GJB2P29033 226 aa17.7■□□□□ 0.42
AC005840.4-201ENST00000541242 VPS37CA5D8V6 355 aaPredicted RBP17.7■□□□□ 0.42
AC005840.4-201ENST00000541242 FAM173BQ6P4H8 233 aa17.7■□□□□ 0.42
AC005840.4-201ENST00000541242 CKAP2LQ8IYA6 745 aa17.7■□□□□ 0.42
AC005840.4-201ENST00000541242 DDX54Q8TDD1 881 aaKnown RBP17.7■□□□□ 0.42
AC005840.4-201ENST00000541242 SLFN14P0C7P3 912 aa17.69■□□□□ 0.42
AC005840.4-201ENST00000541242 MRVI1Q9Y6F6 885 aa17.69■□□□□ 0.42
AC005840.4-201ENST00000541242 ADGRL3Q9HAR2 1447 aa17.69■□□□□ 0.42
AC005840.4-201ENST00000541242 VGLL3A8MV65 326 aa17.69■□□□□ 0.42
AC005840.4-201ENST00000541242 ZNF592Q92610 1267 aa17.69■□□□□ 0.42
AC005840.4-201ENST00000541242 IL17RAQ96F46 866 aa17.69■□□□□ 0.42
AC005840.4-201ENST00000541242 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.69■□□□□ 0.42
AC005840.4-201ENST00000541242 DDX41Q9UJV9 622 aaKnown RBP17.69■□□□□ 0.42
AC005840.4-201ENST00000541242 LIMCH1Q9UPQ0 1083 aa17.69■□□□□ 0.42
AC005840.4-201ENST00000541242 MTMR6Q9Y217 621 aa17.69■□□□□ 0.42
AC005840.4-201ENST00000541242 V9GYY5 206 aaPredicted RBP17.69■□□□□ 0.42
AC005840.4-201ENST00000541242 LTN1O94822 1766 aa17.68■□□□□ 0.42
AC005840.4-201ENST00000541242 SMTNL1A8MU46 457 aa17.68■□□□□ 0.42
AC005840.4-201ENST00000541242 HTATSF1O43719 755 aaKnown RBP17.68■□□□□ 0.42
AC005840.4-201ENST00000541242 LIG1P18858 919 aa17.68■□□□□ 0.42
AC005840.4-201ENST00000541242 PSME1Q06323 249 aa17.68■□□□□ 0.42
AC005840.4-201ENST00000541242 FAM200AQ8TCP9 573 aa17.68■□□□□ 0.42
AC005840.4-201ENST00000541242 NECTIN2Q92692 538 aa17.68■□□□□ 0.42
AC005840.4-201ENST00000541242 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.68■□□□□ 0.42
AC005840.4-201ENST00000541242 LRRC37A3O60309 1634 aa17.68■□□□□ 0.42
AC005840.4-201ENST00000541242 HSPA2P54652 639 aa17.67■□□□□ 0.42
AC005840.4-201ENST00000541242 SPG7Q9UQ90 795 aa17.67■□□□□ 0.42
AC005840.4-201ENST00000541242 CASTP20810 708 aaKnown RBP17.67■□□□□ 0.42
AC005840.4-201ENST00000541242 TYRO3Q06418 890 aa17.67■□□□□ 0.42
AC005840.4-201ENST00000541242 FERMT3Q86UX7 667 aa17.67■□□□□ 0.42
AC005840.4-201ENST00000541242 IP6K1Q92551 441 aa17.67■□□□□ 0.42
AC005840.4-201ENST00000541242 ORAI2Q96SN7 254 aa17.67■□□□□ 0.42
AC005840.4-201ENST00000541242 CCT4P50991 539 aaKnown RBP17.66■□□□□ 0.42
AC005840.4-201ENST00000541242 STAP2Q9UGK3 403 aa17.66■□□□□ 0.42
AC005840.4-201ENST00000541242 ATP6V1DQ9Y5K8 247 aa17.66■□□□□ 0.42
AC005840.4-201ENST00000541242 NFAT5O94916 1531 aa17.66■□□□□ 0.42
AC005840.4-201ENST00000541242 RAD50Q92878 1312 aa17.66■□□□□ 0.42
AC005840.4-201ENST00000541242 MAP3K5Q99683 1374 aa17.66■□□□□ 0.42
AC005840.4-201ENST00000541242 ANO6Q4KMQ2 910 aa17.66■□□□□ 0.42
AC005840.4-201ENST00000541242 NBPF6Q5VWK0 638 aa17.66■□□□□ 0.42
AC005840.4-201ENST00000541242 ZSCAN25Q6NSZ9 544 aa17.66■□□□□ 0.42
AC005840.4-201ENST00000541242 TTC6Q86TZ1 520 aa17.66■□□□□ 0.42
AC005840.4-201ENST00000541242 NBPF4Q96M43 638 aa17.66■□□□□ 0.42
AC005840.4-201ENST00000541242 CBX8Q9HC52 389 aa17.66■□□□□ 0.42
AC005840.4-201ENST00000541242 LRRFIP2Q9Y608 721 aaKnown RBP17.66■□□□□ 0.42
AC005840.4-201ENST00000541242 CCDC112Q8NEF3 446 aa17.65■□□□□ 0.42
AC005840.4-201ENST00000541242 KIF18AQ8NI77 898 aa17.65■□□□□ 0.42
AC005840.4-201ENST00000541242 TRIM5Q9C035 493 aa17.65■□□□□ 0.42
AC005840.4-201ENST00000541242 NPHP4O75161 1426 aaPredicted RBP17.65■□□□□ 0.42
AC005840.4-201ENST00000541242 TPD52L1Q16890 204 aaPredicted RBP17.65■□□□□ 0.42
AC005840.4-201ENST00000541242 CWC27Q6UX04 472 aaKnown RBP17.65■□□□□ 0.42
AC005840.4-201ENST00000541242 ATP8B2P98198 1209 aa17.64■□□□□ 0.42
AC005840.4-201ENST00000541242 GABPB1Q06547 395 aaPredicted RBP17.64■□□□□ 0.42
AC005840.4-201ENST00000541242 MAP3K11Q16584 847 aa17.64■□□□□ 0.42
AC005840.4-201ENST00000541242 NECAB1Q8N987 351 aa17.64■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms