RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 LRRC69Q6ZNQ3 347 aa11.92□□□□□ -0.5
YBX3-210ENST00000540975 SLAIN2Q9P270 581 aa11.92□□□□□ -0.5
YBX3-210ENST00000540975 PHF24Q9UPV7 400 aa11.92□□□□□ -0.5
YBX3-210ENST00000540975 ATXN7O15265 892 aaPredicted RBP11.91□□□□□ -0.5
YBX3-210ENST00000540975 ABHD17AQ96GS6 310 aa11.91□□□□□ -0.5
YBX3-210ENST00000540975 INSM1Q01101 510 aaPredicted RBP11.9□□□□□ -0.5
YBX3-210ENST00000540975 FKBP5Q13451 457 aaPredicted RBP11.9□□□□□ -0.5
YBX3-210ENST00000540975 VTI1AQ96AJ9 217 aa11.9□□□□□ -0.5
YBX3-210ENST00000540975 ATXN7L1Q9ULK2 861 aaPredicted RBP11.9□□□□□ -0.5
YBX3-210ENST00000540975 TMEM88BA6NKF7 163 aa11.89□□□□□ -0.51
YBX3-210ENST00000540975 LORP23490 312 aaPredicted RBP11.89□□□□□ -0.51
YBX3-210ENST00000540975 TNP2Q05952 138 aa11.89□□□□□ -0.51
YBX3-210ENST00000540975 SAMD5Q5TGI4 173 aa11.89□□□□□ -0.51
YBX3-210ENST00000540975 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.89□□□□□ -0.51
YBX3-210ENST00000540975 MBIPQ9NS73 344 aa11.89□□□□□ -0.51
YBX3-210ENST00000540975 CXXC1Q9P0U4 656 aaPredicted RBP11.89□□□□□ -0.51
YBX3-210ENST00000540975 ANKIB1Q9P2G1 1089 aa11.89□□□□□ -0.51
YBX3-210ENST00000540975 MX2P20592 715 aa11.88□□□□□ -0.51
YBX3-210ENST00000540975 SRSF11Q05519 484 aaKnown RBP11.88□□□□□ -0.51
YBX3-210ENST00000540975 RTN1Q16799 776 aa11.88□□□□□ -0.51
YBX3-210ENST00000540975 ZNF280CQ8ND82 737 aa11.88□□□□□ -0.51
YBX3-210ENST00000540975 SUSD3Q96L08 255 aa11.88□□□□□ -0.51
YBX3-210ENST00000540975 MAPTP10636 758 aaKnown RBP11.87□□□□□ -0.51
YBX3-210ENST00000540975 KHNYNO15037 678 aaKnown RBP11.86□□□□□ -0.51
YBX3-210ENST00000540975 SLURP2P0DP57 97 aa11.86□□□□□ -0.51
YBX3-210ENST00000540975 HSH2DQ96JZ2 352 aa11.86□□□□□ -0.51
YBX3-210ENST00000540975 HCN2Q9UL51 889 aa11.86□□□□□ -0.51
YBX3-210ENST00000540975 IGF1RP08069 1367 aa11.85□□□□□ -0.51
YBX3-210ENST00000540975 DCDC2BA2VCK2 349 aa11.85□□□□□ -0.51
YBX3-210ENST00000540975 ADAMTS2O95450 1211 aa11.85□□□□□ -0.51
YBX3-210ENST00000540975 FAM157BP0CG42 384 aa11.85□□□□□ -0.51
YBX3-210ENST00000540975 FGFR3P22607 806 aa11.85□□□□□ -0.51
YBX3-210ENST00000540975 CTBSQ01459 385 aa11.85□□□□□ -0.51
YBX3-210ENST00000540975 ZSCAN1Q8NBB4 408 aa11.85□□□□□ -0.51
YBX3-210ENST00000540975 QTRT2Q9H974 415 aaKnown RBP11.85□□□□□ -0.51
YBX3-210ENST00000540975 CARNS1A5YM72 827 aa11.84□□□□□ -0.51
YBX3-210ENST00000540975 ATP2B4P23634 1241 aa11.84□□□□□ -0.51
YBX3-210ENST00000540975 MYO19Q96H55 970 aa11.84□□□□□ -0.51
YBX3-210ENST00000540975 NSFL1CQ9UNZ2 370 aaKnown RBP11.84□□□□□ -0.51
YBX3-210ENST00000540975 C2CD2LO14523 706 aa11.83□□□□□ -0.52
YBX3-210ENST00000540975 EFSO43281 561 aa11.83□□□□□ -0.52
YBX3-210ENST00000540975 HIF1AQ16665 826 aa11.83□□□□□ -0.52
YBX3-210ENST00000540975 CAPN12Q6ZSI9 719 aa11.83□□□□□ -0.52
YBX3-210ENST00000540975 COL26A1Q96A83 441 aa11.83□□□□□ -0.52
YBX3-210ENST00000540975 BCS1LQ9Y276 419 aa11.83□□□□□ -0.52
YBX3-210ENST00000540975 STRN4Q9NRL3 753 aa11.82□□□□□ -0.52
YBX3-210ENST00000540975 KLK14Q9P0G3 267 aa11.82□□□□□ -0.52
YBX3-210ENST00000540975 LRFN2Q9ULH4 789 aa11.82□□□□□ -0.52
YBX3-210ENST00000540975 C11orf91Q3C1V1 193 aa11.81□□□□□ -0.52
YBX3-210ENST00000540975 COX20Q5RI15 118 aa11.81□□□□□ -0.52
YBX3-210ENST00000540975 CEP63Q96MT8 703 aa11.81□□□□□ -0.52
YBX3-210ENST00000540975 MKNK1Q9BUB5 465 aa11.81□□□□□ -0.52
YBX3-210ENST00000540975 MARK1Q9P0L2 795 aa11.81□□□□□ -0.52
YBX3-210ENST00000540975 BMP4P12644 408 aa11.8□□□□□ -0.52
YBX3-210ENST00000540975 CD33P20138 364 aa11.8□□□□□ -0.52
YBX3-210ENST00000540975 SSFA2P28290 1259 aa11.8□□□□□ -0.52
YBX3-210ENST00000540975 MAP2K3P46734 347 aa11.8□□□□□ -0.52
YBX3-210ENST00000540975 SFSWAPQ12872 951 aaKnown RBP11.8□□□□□ -0.52
YBX3-210ENST00000540975 DGKZQ13574 1117 aa11.8□□□□□ -0.52
YBX3-210ENST00000540975 LAMC2Q13753 1193 aa11.8□□□□□ -0.52
YBX3-210ENST00000540975 FAM182BQ5T319 152 aa11.8□□□□□ -0.52
YBX3-210ENST00000540975 WHAMMQ8TF30 809 aa11.8□□□□□ -0.52
YBX3-210ENST00000540975 PTCD1O75127 700 aaKnown RBP11.79□□□□□ -0.52
YBX3-210ENST00000540975 NAA30Q147X3 362 aaPredicted RBP11.79□□□□□ -0.52
YBX3-210ENST00000540975 BTLAQ7Z6A9 289 aa11.79□□□□□ -0.52
YBX3-210ENST00000540975 SAP130Q9H0E3 1048 aa11.79□□□□□ -0.52
YBX3-210ENST00000540975 DMGDHQ9UI17 866 aaKnown RBP11.79□□□□□ -0.52
YBX3-210ENST00000540975 TGFBR3LH3BV60 316 aa11.78□□□□□ -0.52
YBX3-210ENST00000540975 IER5Q5VY09 327 aa11.78□□□□□ -0.52
YBX3-210ENST00000540975 ZNF385CQ66K41 422 aaPredicted RBP11.78□□□□□ -0.52
YBX3-210ENST00000540975 LYPD4Q6UWN0 246 aa11.78□□□□□ -0.52
YBX3-210ENST00000540975 ACDQ96AP0 544 aa11.78□□□□□ -0.52
YBX3-210ENST00000540975 USTQ9Y2C2 406 aa11.78□□□□□ -0.52
YBX3-210ENST00000540975 TYRO3Q06418 890 aa11.77□□□□□ -0.53
YBX3-210ENST00000540975 C16orf46Q6P387 395 aa11.77□□□□□ -0.53
YBX3-210ENST00000540975 IFT43Q96FT9 208 aa11.77□□□□□ -0.53
YBX3-210ENST00000540975 BRD7Q9NPI1 651 aa11.77□□□□□ -0.53
YBX3-210ENST00000540975 CELA2BP08218 269 aaPredicted RBP11.75□□□□□ -0.53
YBX3-210ENST00000540975 SCNN1AP37088 669 aa11.75□□□□□ -0.53
YBX3-210ENST00000540975 KCNQ4P56696 695 aa11.75□□□□□ -0.53
YBX3-210ENST00000540975 GRIN2CQ14957 1233 aa11.75□□□□□ -0.53
YBX3-210ENST00000540975 PHLDB3Q6NSJ2 640 aa11.75□□□□□ -0.53
YBX3-210ENST00000540975 RETREG2Q8NC44 543 aa11.75□□□□□ -0.53
YBX3-210ENST00000540975 OXCT2Q9BYC2 517 aaPredicted RBP11.75□□□□□ -0.53
YBX3-210ENST00000540975 SEPT3Q9UH03 358 aa11.75□□□□□ -0.53
YBX3-210ENST00000540975 KCNH4Q9UQ05 1017 aa11.75□□□□□ -0.53
YBX3-210ENST00000540975 MICAL2O94851 1124 aa11.74□□□□□ -0.53
YBX3-210ENST00000540975 STK17AQ9UEE5 414 aa11.73□□□□□ -0.53
YBX3-210ENST00000540975 PRR12Q9ULL5 1215 aa11.73□□□□□ -0.53
YBX3-210ENST00000540975 BCRP11274 1271 aa11.72□□□□□ -0.53
YBX3-210ENST00000540975 BRD2P25440 801 aaKnown RBP11.72□□□□□ -0.53
YBX3-210ENST00000540975 INPP5BP32019 993 aa11.72□□□□□ -0.53
YBX3-210ENST00000540975 SVOPQ8N4V2 548 aa11.72□□□□□ -0.53
YBX3-210ENST00000540975 OPLAHO14841 1288 aa11.71□□□□□ -0.53
YBX3-210ENST00000540975 ARHGEF15O94989 841 aa11.71□□□□□ -0.53
YBX3-210ENST00000540975 ARAFP10398 606 aa11.71□□□□□ -0.53
YBX3-210ENST00000540975 IDH3AP50213 366 aa11.71□□□□□ -0.53
YBX3-210ENST00000540975 PDE4CQ08493 712 aa11.71□□□□□ -0.53
YBX3-210ENST00000540975 SLC30A3Q99726 388 aa11.71□□□□□ -0.53
YBX3-210ENST00000540975 KLF15Q9UIH9 416 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms