RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 HTATSF1O43719 755 aaKnown RBP21.63■■□□□ 1.05
TRIM65-203ENST00000540812 ST5P78524 1137 aa21.63■■□□□ 1.05
TRIM65-203ENST00000540812 MIS18AQ9NYP9 233 aa21.63■■□□□ 1.05
TRIM65-203ENST00000540812 TIAM2Q8IVF5 1701 aa21.63■■□□□ 1.05
TRIM65-203ENST00000540812 SRGNP10124 158 aa21.61■■□□□ 1.05
TRIM65-203ENST00000540812 STYK1Q6J9G0 422 aa21.61■■□□□ 1.05
TRIM65-203ENST00000540812 SMC1BQ8NDV3 1235 aa21.61■■□□□ 1.05
TRIM65-203ENST00000540812 SLX4Q8IY92 1834 aa21.6■■□□□ 1.05
TRIM65-203ENST00000540812 PCNTO95613 3336 aa21.6■■□□□ 1.05
TRIM65-203ENST00000540812 VEGFAP15692 232 aaPredicted RBP21.6■■□□□ 1.05
TRIM65-203ENST00000540812 TAF7Q15545 349 aaPredicted RBP21.6■■□□□ 1.05
TRIM65-203ENST00000540812 CLEC4GQ6UXB4 293 aa21.6■■□□□ 1.05
TRIM65-203ENST00000540812 NBPF5PQ86XG9 351 aaPredicted RBP21.6■■□□□ 1.05
TRIM65-203ENST00000540812 CNKSR1Q969H4 720 aa21.6■■□□□ 1.05
TRIM65-203ENST00000540812 POTECB2RU33 542 aa21.59■■□□□ 1.05
TRIM65-203ENST00000540812 FER1L6Q2WGJ9 1857 aa21.59■■□□□ 1.05
TRIM65-203ENST00000540812 PRPF40BQ6NWY9 871 aaKnown RBP21.59■■□□□ 1.05
TRIM65-203ENST00000540812 MASTLQ96GX5 879 aa21.59■■□□□ 1.05
TRIM65-203ENST00000540812 ERFEQ4G0M1 354 aa21.58■■□□□ 1.05
TRIM65-203ENST00000540812 KLRG1Q96E93 195 aa21.58■■□□□ 1.05
TRIM65-203ENST00000540812 TAOK3Q9H2K8 898 aa21.58■■□□□ 1.05
TRIM65-203ENST00000540812 ZNF652Q9Y2D9 606 aa21.58■■□□□ 1.05
TRIM65-203ENST00000540812 PLEKHF1Q96S99 279 aa21.57■■□□□ 1.04
TRIM65-203ENST00000540812 NIP7Q9Y221 180 aaKnown RBP eCLIP21.57■■□□□ 1.04
TRIM65-203ENST00000540812 LTBP3Q9NS15 1303 aa21.56■■□□□ 1.04
TRIM65-203ENST00000540812 HLFQ16534 295 aa21.56■■□□□ 1.04
TRIM65-203ENST00000540812 CACNA1SQ13698 1873 aa21.56■■□□□ 1.04
TRIM65-203ENST00000540812 FAM177BA6PVY3 158 aa21.55■■□□□ 1.04
TRIM65-203ENST00000540812 THUMPD2Q9BTF0 503 aaKnown RBP21.55■■□□□ 1.04
TRIM65-203ENST00000540812 DPY19L2Q6NUT2 758 aa21.54■■□□□ 1.04
TRIM65-203ENST00000540812 C7orf43Q8WVR3 580 aa21.54■■□□□ 1.04
TRIM65-203ENST00000540812 DICER1Q9UPY3 1922 aaKnown RBP21.54■■□□□ 1.04
TRIM65-203ENST00000540812 ARFGEF2Q9Y6D5 1785 aa21.53■■□□□ 1.04
TRIM65-203ENST00000540812 DLG5Q8TDM6 1919 aa21.53■■□□□ 1.04
TRIM65-203ENST00000540812 KLRG2A4D1S0 409 aaPredicted RBP21.53■■□□□ 1.04
TRIM65-203ENST00000540812 RGL2O15211 777 aa21.53■■□□□ 1.04
TRIM65-203ENST00000540812 NEFMP07197 916 aa21.53■■□□□ 1.04
TRIM65-203ENST00000540812 NFE2L2Q16236 605 aa21.53■■□□□ 1.04
TRIM65-203ENST00000540812 SOGA3Q5TF21 947 aa21.53■■□□□ 1.04
TRIM65-203ENST00000540812 TPTE2Q6XPS3 522 aa21.53■■□□□ 1.04
TRIM65-203ENST00000540812 NGEFQ8N5V2 710 aa21.53■■□□□ 1.04
TRIM65-203ENST00000540812 KDM3BQ7LBC6 1761 aa21.52■■□□□ 1.04
TRIM65-203ENST00000540812 NPR1P16066 1061 aa21.52■■□□□ 1.04
TRIM65-203ENST00000540812 EIF4A1P60842 406 aaKnown RBP21.52■■□□□ 1.04
TRIM65-203ENST00000540812 JMYQ8N9B5 988 aa21.52■■□□□ 1.04
TRIM65-203ENST00000540812 LAMB4A4D0S4 1761 aa21.51■■□□□ 1.03
TRIM65-203ENST00000540812 OLFM4Q6UX06 510 aa21.51■■□□□ 1.03
TRIM65-203ENST00000540812 PNISRQ8TF01 805 aaKnown RBP21.51■■□□□ 1.03
TRIM65-203ENST00000540812 DDNO94850 711 aaPredicted RBP21.5■■□□□ 1.03
TRIM65-203ENST00000540812 CCDC93Q567U6 631 aa21.5■■□□□ 1.03
TRIM65-203ENST00000540812 TTLL7Q6ZT98 887 aa21.49■■□□□ 1.03
TRIM65-203ENST00000540812 RRP7AQ9Y3A4 280 aaKnown RBP21.49■■□□□ 1.03
TRIM65-203ENST00000540812 ABCC12Q96J65 1359 aa21.48■■□□□ 1.03
TRIM65-203ENST00000540812 POTEIP0CG38 1075 aa21.47■■□□□ 1.03
TRIM65-203ENST00000540812 POTEJP0CG39 1038 aa21.47■■□□□ 1.03
TRIM65-203ENST00000540812 NUTM1Q86Y26 1132 aa21.47■■□□□ 1.03
TRIM65-203ENST00000540812 ZNF277Q9NRM2 450 aaPredicted RBP21.47■■□□□ 1.03
TRIM65-203ENST00000540812 MAP3K15Q6ZN16 1313 aa21.47■■□□□ 1.03
TRIM65-203ENST00000540812 MAPK8IP3Q9UPT6 1336 aa21.47■■□□□ 1.03
TRIM65-203ENST00000540812 ERVV-1B6SEH8 477 aa21.46■■□□□ 1.03
TRIM65-203ENST00000540812 MYL6BP14649 208 aa21.46■■□□□ 1.03
TRIM65-203ENST00000540812 GTF2E1P29083 439 aaPredicted RBP21.46■■□□□ 1.03
TRIM65-203ENST00000540812 FKBP4Q02790 459 aaKnown RBP eCLIP21.46■■□□□ 1.034e-6■□□□□ 11.3
TRIM65-203ENST00000540812 GPTP24298 496 aa21.44■■□□□ 1.02
TRIM65-203ENST00000540812 KIF6Q6ZMV9 814 aa21.44■■□□□ 1.02
TRIM65-203ENST00000540812 NYXQ9GZU5 481 aa21.44■■□□□ 1.02
TRIM65-203ENST00000540812 PNNQ9H307 717 aaKnown RBP21.44■■□□□ 1.02
TRIM65-203ENST00000540812 ZBTB3Q9H5J0 574 aa21.44■■□□□ 1.02
TRIM65-203ENST00000540812 UBN2Q6ZU65 1347 aa21.44■■□□□ 1.02
TRIM65-203ENST00000540812 CHADLQ6NUI6 762 aa21.43■■□□□ 1.02
TRIM65-203ENST00000540812 ZNF541Q9H0D2 1346 aa21.43■■□□□ 1.02
TRIM65-203ENST00000540812 NUP98P52948 1817 aa21.43■■□□□ 1.02
TRIM65-203ENST00000540812 ALDH1B1P30837 517 aa21.42■■□□□ 1.02
TRIM65-203ENST00000540812 CRY2Q49AN0 593 aa21.42■■□□□ 1.02
TRIM65-203ENST00000540812 RTKN2Q8IZC4 609 aa21.42■■□□□ 1.02
TRIM65-203ENST00000540812 L3MBTL3Q96JM7 780 aaPredicted RBP21.42■■□□□ 1.02
TRIM65-203ENST00000540812 TSPYL4Q9UJ04 414 aa21.42■■□□□ 1.02
TRIM65-203ENST00000540812 SNED1Q8TER0 1413 aa21.41■■□□□ 1.02
TRIM65-203ENST00000540812 SUSD4Q5VX71 490 aa21.41■■□□□ 1.02
TRIM65-203ENST00000540812 SYNE4Q8N205 404 aa21.41■■□□□ 1.02
TRIM65-203ENST00000540812 RIPK4P57078 832 aa21.4■■□□□ 1.02
TRIM65-203ENST00000540812 COL13A1Q5TAT6 717 aaPredicted RBP21.4■■□□□ 1.02
TRIM65-203ENST00000540812 ZNF34Q8IZ26 560 aa21.4■■□□□ 1.02
TRIM65-203ENST00000540812 TAF1DQ9H5J8 278 aaPredicted RBP21.4■■□□□ 1.02
TRIM65-203ENST00000540812 IBTKQ9P2D0 1353 aaPredicted RBP21.39■■□□□ 1.02
TRIM65-203ENST00000540812 IQCA1LA6NCM1 817 aa21.39■■□□□ 1.01
TRIM65-203ENST00000540812 IARSP41252 1262 aaKnown RBP21.39■■□□□ 1.01
TRIM65-203ENST00000540812 LRP10Q7Z4F1 713 aa21.39■■□□□ 1.01
TRIM65-203ENST00000540812 SLC51AQ86UW1 340 aa21.39■■□□□ 1.01
TRIM65-203ENST00000540812 ERBB4Q15303 1308 aa21.38■■□□□ 1.01
TRIM65-203ENST00000540812 NTSR2O95665 410 aa21.38■■□□□ 1.01
TRIM65-203ENST00000540812 ANXA1P04083 346 aa21.38■■□□□ 1.01
TRIM65-203ENST00000540812 EIF2S2P20042 333 aaKnown RBP21.38■■□□□ 1.01
TRIM65-203ENST00000540812 PDIA6Q15084 440 aa21.38■■□□□ 1.01
TRIM65-203ENST00000540812 RALBP1Q15311 655 aa21.38■■□□□ 1.01
TRIM65-203ENST00000540812 PROSER3Q2NL68 480 aa21.38■■□□□ 1.01
TRIM65-203ENST00000540812 C3orf67Q6ZVT6 689 aa21.38■■□□□ 1.01
TRIM65-203ENST00000540812 FZD9O00144 591 aa21.37■■□□□ 1.01
TRIM65-203ENST00000540812 HOXA10P31260 410 aaPredicted RBP21.37■■□□□ 1.01
TRIM65-203ENST00000540812 GIGYF2Q6Y7W6 1299 aaKnown RBP21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms