RNA–Protein interactions for RNA: ENST00000540326.5

NEK6-213, Transcript of NIMA related kinase 6, humanhuman

TSL 1 (best) BASIC

Gene NEK6, Length 2,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-213ENST00000540326 DDX54Q8TDD1 881 aaKnown RBP14.97□□□□□ -0.01
NEK6-213ENST00000540326 TTC41PQ6P2S7 1318 aa14.97□□□□□ -0.01
NEK6-213ENST00000540326 ADCK5Q3MIX3 580 aa14.97□□□□□ -0.01
NEK6-213ENST00000540326 PLEKHO1Q53GL0 409 aaPredicted RBP14.97□□□□□ -0.01
NEK6-213ENST00000540326 KDM3BQ7LBC6 1761 aa14.97□□□□□ -0.01
NEK6-213ENST00000540326 NFAT5O94916 1531 aa14.97□□□□□ -0.01
NEK6-213ENST00000540326 STX6O43752 255 aa14.96□□□□□ -0.01
NEK6-213ENST00000540326 ZSCAN22P10073 491 aaPredicted RBP14.96□□□□□ -0.01
NEK6-213ENST00000540326 PRPF40BQ6NWY9 871 aaKnown RBP14.96□□□□□ -0.01
NEK6-213ENST00000540326 FER1L4A9Z1Z3 1794 aa14.96□□□□□ -0.01
NEK6-213ENST00000540326 IFIT2P09913 472 aaKnown RBP14.96□□□□□ -0.01
NEK6-213ENST00000540326 C1orf141Q5JVX7 400 aa14.96□□□□□ -0.01
NEK6-213ENST00000540326 ECHDC1Q9NTX5 307 aa14.96□□□□□ -0.01
NEK6-213ENST00000540326 SMC3Q9UQE7 1217 aa14.96□□□□□ -0.01
NEK6-213ENST00000540326 ZKSCAN5Q9Y2L8 839 aa14.96□□□□□ -0.01
NEK6-213ENST00000540326 RNMTO43148 476 aaKnown RBP14.95□□□□□ -0.02
NEK6-213ENST00000540326 GIGYF1O75420 1035 aaPredicted RBP14.95□□□□□ -0.02
NEK6-213ENST00000540326 LMOD2Q6P5Q4 547 aa14.95□□□□□ -0.02
NEK6-213ENST00000540326 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.95□□□□□ -0.02
NEK6-213ENST00000540326 JAKMIP1Q96N16 626 aaKnown RBP14.95□□□□□ -0.02
NEK6-213ENST00000540326 CHMP4AQ9BY43 222 aa14.95□□□□□ -0.02
NEK6-213ENST00000540326 HYPKQ9NX55 129 aa14.95□□□□□ -0.02
NEK6-213ENST00000540326 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.95□□□□□ -0.02
NEK6-213ENST00000540326 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.95□□□□□ -0.02
NEK6-213ENST00000540326 USP42Q9H9J4 1324 aaKnown RBP14.95□□□□□ -0.02
NEK6-213ENST00000540326 PXDNQ92626 1479 aa14.95□□□□□ -0.02
NEK6-213ENST00000540326 MTX1Q13505 466 aa14.95□□□□□ -0.02
NEK6-213ENST00000540326 CCDC83Q8IWF9 413 aa14.95□□□□□ -0.02
NEK6-213ENST00000540326 KCNH5Q8NCM2 988 aa14.95□□□□□ -0.02
NEK6-213ENST00000540326 FIBPO43427 364 aa14.94□□□□□ -0.02
NEK6-213ENST00000540326 ZNF500O60304 480 aaPredicted RBP14.94□□□□□ -0.02
NEK6-213ENST00000540326 TPM2P07951 284 aa14.94□□□□□ -0.02
NEK6-213ENST00000540326 AIMP1Q12904 312 aaKnown RBP14.94□□□□□ -0.02
NEK6-213ENST00000540326 KSR2Q6VAB6 950 aa14.94□□□□□ -0.02
NEK6-213ENST00000540326 AACSQ86V21 672 aa14.94□□□□□ -0.02
NEK6-213ENST00000540326 R3HCC1Q9Y3T6 440 aaKnown RBP14.94□□□□□ -0.02
NEK6-213ENST00000540326 PHF14O94880 888 aa14.94□□□□□ -0.02
NEK6-213ENST00000540326 MPNDQ8N594 471 aa14.94□□□□□ -0.02
NEK6-213ENST00000540326 RUFY2Q8WXA3 655 aa14.94□□□□□ -0.02
NEK6-213ENST00000540326 CCDC39Q9UFE4 941 aa14.94□□□□□ -0.02
NEK6-213ENST00000540326 RRP9O43818 475 aaKnown RBP14.93□□□□□ -0.02
NEK6-213ENST00000540326 F13A1P00488 732 aa14.93□□□□□ -0.02
NEK6-213ENST00000540326 GCP02774 474 aa14.93□□□□□ -0.02
NEK6-213ENST00000540326 PTMAP06454 111 aaKnown RBP14.93□□□□□ -0.02
NEK6-213ENST00000540326 AMOTQ4VCS5 1084 aa14.93□□□□□ -0.02
NEK6-213ENST00000540326 PDRG1Q9NUG6 133 aa14.93□□□□□ -0.02
NEK6-213ENST00000540326 ALDH1L1O75891 902 aa14.92□□□□□ -0.02
NEK6-213ENST00000540326 GJB2P29033 226 aa14.92□□□□□ -0.02
NEK6-213ENST00000540326 TMEM87AQ8NBN3 555 aa14.92□□□□□ -0.02
NEK6-213ENST00000540326 GPATCH3Q96I76 525 aa14.92□□□□□ -0.02
NEK6-213ENST00000540326 CCDC8Q9H0W5 538 aaPredicted RBP14.92□□□□□ -0.02
NEK6-213ENST00000540326 SUCLG2Q96I99 432 aa14.92□□□□□ -0.02
NEK6-213ENST00000540326 FAM227BQ96M60 508 aa14.92□□□□□ -0.02
NEK6-213ENST00000540326 SIL1Q9H173 461 aa14.92□□□□□ -0.02
NEK6-213ENST00000540326 LMO7Q8WWI1 1683 aa14.91□□□□□ -0.02
NEK6-213ENST00000540326 SASH1O94885 1247 aa14.91□□□□□ -0.02
NEK6-213ENST00000540326 ANKRD24Q8TF21 1146 aa14.91□□□□□ -0.02
NEK6-213ENST00000540326 EAF2Q96CJ1 260 aaPredicted RBP14.91□□□□□ -0.02
NEK6-213ENST00000540326 EVI5LQ96CN4 794 aa14.91□□□□□ -0.02
NEK6-213ENST00000540326 KAZALD1Q96I82 304 aa14.91□□□□□ -0.02
NEK6-213ENST00000540326 ORAI2Q96SN7 254 aa14.91□□□□□ -0.02
NEK6-213ENST00000540326 BICC1Q9H694 974 aaKnown RBP14.91□□□□□ -0.02
NEK6-213ENST00000540326 CYP46A1Q9Y6A2 500 aa14.91□□□□□ -0.02
NEK6-213ENST00000540326 CRYBG1Q9Y4K1 1723 aa14.91□□□□□ -0.02
NEK6-213ENST00000540326 KCNJ4P48050 445 aa14.91□□□□□ -0.02
NEK6-213ENST00000540326 COL9A3Q14050 684 aaPredicted RBP14.91□□□□□ -0.02
NEK6-213ENST00000540326 CCDC183Q5T5S1 534 aa14.91□□□□□ -0.02
NEK6-213ENST00000540326 VPS53Q5VIR6 699 aa14.91□□□□□ -0.02
NEK6-213ENST00000540326 ERC1Q8IUD2 1116 aa14.91□□□□□ -0.02
NEK6-213ENST00000540326 NECAB1Q8N987 351 aa14.91□□□□□ -0.02
NEK6-213ENST00000540326 TLR7Q9NYK1 1049 aaKnown RBP14.91□□□□□ -0.02
NEK6-213ENST00000540326 GRM8O00222 908 aa14.9□□□□□ -0.02
NEK6-213ENST00000540326 HCLS1P14317 486 aaPredicted RBP14.9□□□□□ -0.02
NEK6-213ENST00000540326 UBE2HP62256 183 aa14.9□□□□□ -0.02
NEK6-213ENST00000540326 DNM1Q05193 864 aaKnown RBP14.9□□□□□ -0.02
NEK6-213ENST00000540326 NECTIN1Q15223 517 aa14.9□□□□□ -0.02
NEK6-213ENST00000540326 ARHGEF25Q86VW2 580 aa14.9□□□□□ -0.02
NEK6-213ENST00000540326 KLHDC4Q8TBB5 520 aa14.9□□□□□ -0.02
NEK6-213ENST00000540326 ZSWIM6Q9HCJ5 1215 aa14.9□□□□□ -0.02
NEK6-213ENST00000540326 USP25Q9UHP3 1055 aa14.9□□□□□ -0.02
NEK6-213ENST00000540326 AXIN2Q9Y2T1 843 aa14.9□□□□□ -0.02
NEK6-213ENST00000540326 ME3Q16798 604 aa14.9□□□□□ -0.02
NEK6-213ENST00000540326 CCDC171Q6TFL3 1326 aa14.9□□□□□ -0.02
NEK6-213ENST00000540326 RBM8AQ9Y5S9 174 aaKnown RBP14.9□□□□□ -0.02
NEK6-213ENST00000540326 VPS37CA5D8V6 355 aaPredicted RBP14.89□□□□□ -0.03
NEK6-213ENST00000540326 ZKSCAN1P17029 563 aaPredicted RBP14.89□□□□□ -0.03
NEK6-213ENST00000540326 ST3GAL1Q11201 340 aa14.89□□□□□ -0.03
NEK6-213ENST00000540326 G3BP1Q13283 466 aaKnown RBP eCLIP14.89□□□□□ -0.03
NEK6-213ENST00000540326 LINS1Q8NG48 757 aa14.89□□□□□ -0.03
NEK6-213ENST00000540326 MCM5P33992 734 aa14.89□□□□□ -0.03
NEK6-213ENST00000540326 NMIQ13287 307 aaPredicted RBP14.89□□□□□ -0.03
NEK6-213ENST00000540326 ANKLE2Q86XL3 938 aa14.89□□□□□ -0.03
NEK6-213ENST00000540326 TCEANC2Q96MN5 208 aa14.89□□□□□ -0.03
NEK6-213ENST00000540326 BOLA2Q9H3K6 86 aa14.89□□□□□ -0.03
NEK6-213ENST00000540326 MTMR6Q9Y217 621 aa14.89□□□□□ -0.03
NEK6-213ENST00000540326 ATP6V1DQ9Y5K8 247 aa14.89□□□□□ -0.03
NEK6-213ENST00000540326 SLC39A6Q13433 755 aa14.88□□□□□ -0.03
NEK6-213ENST00000540326 CREB3L3Q68CJ9 461 aa14.88□□□□□ -0.03
NEK6-213ENST00000540326 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.88□□□□□ -0.03
NEK6-213ENST00000540326 HEG1Q9ULI3 1381 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 189.2 ms