RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 SOGA3Q5TF21 947 aa26.79■■□□□ 1.88
LPCAT3-210ENST00000540090 PRPF40BQ6NWY9 871 aaKnown RBP26.79■■□□□ 1.88
LPCAT3-210ENST00000540090 SCN7AQ01118 1682 aa26.79■■□□□ 1.88
LPCAT3-210ENST00000540090 CLEC4GQ6UXB4 293 aa26.78■■□□□ 1.88
LPCAT3-210ENST00000540090 RSPH6AQ9H0K4 717 aa26.78■■□□□ 1.88
LPCAT3-210ENST00000540090 FER1L6Q2WGJ9 1857 aa26.77■■□□□ 1.88
LPCAT3-210ENST00000540090 DDNO94850 711 aaPredicted RBP26.77■■□□□ 1.88
LPCAT3-210ENST00000540090 PRKAR2BP31323 418 aa26.77■■□□□ 1.88
LPCAT3-210ENST00000540090 CHADLQ6NUI6 762 aa26.77■■□□□ 1.88
LPCAT3-210ENST00000540090 SIPA1L3O60292 1781 aaPredicted RBP26.76■■□□□ 1.88
LPCAT3-210ENST00000540090 C7orf43Q8WVR3 580 aa26.76■■□□□ 1.87
LPCAT3-210ENST00000540090 CREBZFQ9NS37 354 aa26.75■■□□□ 1.87
LPCAT3-210ENST00000540090 COL11A2P13942 1736 aaPredicted RBP26.75■■□□□ 1.87
LPCAT3-210ENST00000540090 SNRPA1P09661 255 aaKnown RBP26.74■■□□□ 1.87
LPCAT3-210ENST00000540090 PIP4K2AP48426 406 aaPredicted RBP26.74■■□□□ 1.87
LPCAT3-210ENST00000540090 NBPF5PQ86XG9 351 aaPredicted RBP26.74■■□□□ 1.87
LPCAT3-210ENST00000540090 PRAMEF22A3QJZ6 481 aa26.73■■□□□ 1.87
LPCAT3-210ENST00000540090 KLRG2A4D1S0 409 aaPredicted RBP26.73■■□□□ 1.87
LPCAT3-210ENST00000540090 CAPN15O75808 1086 aa26.73■■□□□ 1.87
LPCAT3-210ENST00000540090 POTEIP0CG38 1075 aa26.73■■□□□ 1.87
LPCAT3-210ENST00000540090 POTEJP0CG39 1038 aa26.73■■□□□ 1.87
LPCAT3-210ENST00000540090 CFAP53Q96M91 514 aa26.73■■□□□ 1.87
LPCAT3-210ENST00000540090 DICER1Q9UPY3 1922 aaKnown RBP26.73■■□□□ 1.87
LPCAT3-210ENST00000540090 SLX4Q8IY92 1834 aa26.72■■□□□ 1.87
LPCAT3-210ENST00000540090 ZNF652Q9Y2D9 606 aa26.72■■□□□ 1.87
LPCAT3-210ENST00000540090 NPR1P16066 1061 aa26.71■■□□□ 1.87
LPCAT3-210ENST00000540090 NUDCQ9Y266 331 aa26.71■■□□□ 1.87
LPCAT3-210ENST00000540090 IQCA1LA6NCM1 817 aa26.7■■□□□ 1.86
LPCAT3-210ENST00000540090 RGL2O15211 777 aa26.7■■□□□ 1.86
LPCAT3-210ENST00000540090 CCDC93Q567U6 631 aa26.7■■□□□ 1.86
LPCAT3-210ENST00000540090 RTF1Q92541 710 aaKnown RBP26.7■■□□□ 1.86
LPCAT3-210ENST00000540090 L3MBTL3Q96JM7 780 aaPredicted RBP26.7■■□□□ 1.86
LPCAT3-210ENST00000540090 TPTE2Q6XPS3 522 aa26.69■■□□□ 1.86
LPCAT3-210ENST00000540090 NBPF26B4DH59 902 aa26.68■■□□□ 1.86
LPCAT3-210ENST00000540090 NBPF10Q6P3W6 841 aaKnown RBP26.68■■□□□ 1.86
LPCAT3-210ENST00000540090 MCM10Q7L590 875 aa26.68■■□□□ 1.86
LPCAT3-210ENST00000540090 NBPF15Q8N660 670 aa26.68■■□□□ 1.86
LPCAT3-210ENST00000540090 MKRN1Q9UHC7 482 aaKnown RBP26.68■■□□□ 1.86
LPCAT3-210ENST00000540090 LDHDQ86WU2 507 aa26.67■■□□□ 1.86
LPCAT3-210ENST00000540090 TAF1DQ9H5J8 278 aaPredicted RBP26.67■■□□□ 1.86
LPCAT3-210ENST00000540090 NIP7Q9Y221 180 aaKnown RBP eCLIP26.67■■□□□ 1.86
LPCAT3-210ENST00000540090 U2AF1L5P0DN76 240 aaPredicted RBP26.66■■□□□ 1.86
LPCAT3-210ENST00000540090 U2AF1Q01081 240 aaKnown RBP eCLIP26.66■■□□□ 1.86
LPCAT3-210ENST00000540090 FKBP4Q02790 459 aaKnown RBP eCLIP26.66■■□□□ 1.86
LPCAT3-210ENST00000540090 PASKQ96RG2 1323 aa26.65■■□□□ 1.86
LPCAT3-210ENST00000540090 HTATSF1O43719 755 aaKnown RBP26.65■■□□□ 1.86
LPCAT3-210ENST00000540090 BCORQ6W2J9 1755 aa26.65■■□□□ 1.86
LPCAT3-210ENST00000540090 RTKN2Q8IZC4 609 aa26.64■■□□□ 1.86
LPCAT3-210ENST00000540090 DCTN1Q14203 1278 aa26.63■■□□□ 1.85
LPCAT3-210ENST00000540090 ZNF277Q9NRM2 450 aaPredicted RBP26.63■■□□□ 1.85
LPCAT3-210ENST00000540090 OLFM4Q6UX06 510 aa26.62■■□□□ 1.85
LPCAT3-210ENST00000540090 ARFGEF2Q9Y6D5 1785 aa26.61■■□□□ 1.85
LPCAT3-210ENST00000540090 CNTNAP1P78357 1384 aa26.61■■□□□ 1.85
LPCAT3-210ENST00000540090 ITGBL1O95965 494 aaPredicted RBP26.61■■□□□ 1.85
LPCAT3-210ENST00000540090 PPP2R1AP30153 589 aa26.61■■□□□ 1.85
LPCAT3-210ENST00000540090 ALDH1B1P30837 517 aa26.61■■□□□ 1.85
LPCAT3-210ENST00000540090 TAF7Q15545 349 aaPredicted RBP26.61■■□□□ 1.85
LPCAT3-210ENST00000540090 HLFQ16534 295 aa26.61■■□□□ 1.85
LPCAT3-210ENST00000540090 FAM177BA6PVY3 158 aa26.6■■□□□ 1.85
LPCAT3-210ENST00000540090 ZNF541Q9H0D2 1346 aa26.6■■□□□ 1.85
LPCAT3-210ENST00000540090 HACL1Q9UJ83 578 aa26.59■■□□□ 1.85
LPCAT3-210ENST00000540090 FZD9O00144 591 aa26.58■■□□□ 1.85
LPCAT3-210ENST00000540090 SYNE4Q8N205 404 aa26.58■■□□□ 1.85
LPCAT3-210ENST00000540090 TMEM88BA6NKF7 163 aa26.57■■□□□ 1.84
LPCAT3-210ENST00000540090 GTF2E1P29083 439 aaPredicted RBP26.57■■□□□ 1.84
LPCAT3-210ENST00000540090 IARSP41252 1262 aaKnown RBP26.57■■□□□ 1.84
LPCAT3-210ENST00000540090 EAPPQ56P03 285 aaPredicted RBP26.57■■□□□ 1.84
LPCAT3-210ENST00000540090 MIS18AQ9NYP9 233 aa26.57■■□□□ 1.84
LPCAT3-210ENST00000540090 SCN4AP35499 1836 aa26.57■■□□□ 1.84
LPCAT3-210ENST00000540090 CACNA1SQ13698 1873 aa26.57■■□□□ 1.84
LPCAT3-210ENST00000540090 FOXN1O15353 648 aa26.56■■□□□ 1.84
LPCAT3-210ENST00000540090 EPHX2P34913 555 aa26.56■■□□□ 1.84
LPCAT3-210ENST00000540090 CRY2Q49AN0 593 aa26.55■■□□□ 1.84
LPCAT3-210ENST00000540090 PNMA8AQ86V59 439 aaPredicted RBP26.55■■□□□ 1.84
LPCAT3-210ENST00000540090 ERVV-1B6SEH8 477 aa26.54■■□□□ 1.84
LPCAT3-210ENST00000540090 VEGFBP49765 207 aa26.54■■□□□ 1.84
LPCAT3-210ENST00000540090 PSMD1Q99460 953 aa26.54■■□□□ 1.84
LPCAT3-210ENST00000540090 PRDM10Q9NQV6 1147 aa26.54■■□□□ 1.84
LPCAT3-210ENST00000540090 CLEC11AQ9Y240 323 aa26.54■■□□□ 1.84
LPCAT3-210ENST00000540090 NYXQ9GZU5 481 aa26.53■■□□□ 1.84
LPCAT3-210ENST00000540090 CC2D2BQ6DHV5 1058 aa26.52■■□□□ 1.84
LPCAT3-210ENST00000540090 CNTROBQ8N137 903 aa26.52■■□□□ 1.84
LPCAT3-210ENST00000540090 GPC2Q8N158 579 aa26.52■■□□□ 1.84
LPCAT3-210ENST00000540090 SNED1Q8TER0 1413 aa26.51■■□□□ 1.83
LPCAT3-210ENST00000540090 RNF123Q5XPI4 1314 aa26.51■■□□□ 1.83
LPCAT3-210ENST00000540090 NUTM1Q86Y26 1132 aa26.51■■□□□ 1.83
LPCAT3-210ENST00000540090 NGEFQ8N5V2 710 aa26.51■■□□□ 1.83
LPCAT3-210ENST00000540090 PNISRQ8TF01 805 aaKnown RBP26.51■■□□□ 1.83
LPCAT3-210ENST00000540090 JDP2Q8WYK2 163 aa26.51■■□□□ 1.83
LPCAT3-210ENST00000540090 ABCC12Q96J65 1359 aa26.49■■□□□ 1.83
LPCAT3-210ENST00000540090 MAP3K15Q6ZN16 1313 aa26.49■■□□□ 1.83
LPCAT3-210ENST00000540090 HOXA10P31260 410 aaPredicted RBP26.49■■□□□ 1.83
LPCAT3-210ENST00000540090 CTCFP49711 727 aaPredicted RBP26.49■■□□□ 1.83
LPCAT3-210ENST00000540090 MAP1SQ66K74 1059 aaPredicted RBP26.49■■□□□ 1.83
LPCAT3-210ENST00000540090 WBP1LQ9NX94 342 aa26.49■■□□□ 1.83
LPCAT3-210ENST00000540090 RASSF10A6NK89 507 aa26.48■■□□□ 1.83
LPCAT3-210ENST00000540090 EIF4A1P60842 406 aaKnown RBP26.48■■□□□ 1.83
LPCAT3-210ENST00000540090 TTLL7Q6ZT98 887 aa26.48■■□□□ 1.83
LPCAT3-210ENST00000540090 AIDAQ96BJ3 306 aa26.48■■□□□ 1.83
LPCAT3-210ENST00000540090 GRIPAP1Q4V328 841 aa26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms