RNA–Protein interactions for RNA: ENST00000539782.1

LDHB-208, Transcript of lactate dehydrogenase B, humanhuman

TSL 3

Gene LDHB, Length 487 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-208ENST00000539782 ANKRD31Q8N7Z5 1873 aa9.62□□□□□ -0.87
LDHB-208ENST00000539782 CAMTA2O94983 1202 aa9.62□□□□□ -0.87
LDHB-208ENST00000539782 PRKAR2BP31323 418 aa9.62□□□□□ -0.87
LDHB-208ENST00000539782 CCDC93Q567U6 631 aa9.62□□□□□ -0.87
LDHB-208ENST00000539782 CREBZFQ9NS37 354 aa9.62□□□□□ -0.87
LDHB-208ENST00000539782 NUDCQ9Y266 331 aa9.62□□□□□ -0.87
LDHB-208ENST00000539782 POTECB2RU33 542 aa9.61□□□□□ -0.87
LDHB-208ENST00000539782 PER1O15534 1290 aaPredicted RBP9.61□□□□□ -0.87
LDHB-208ENST00000539782 DDNO94850 711 aaPredicted RBP9.61□□□□□ -0.87
LDHB-208ENST00000539782 SRGNP10124 158 aa9.61□□□□□ -0.87
LDHB-208ENST00000539782 MKRN1Q9UHC7 482 aaKnown RBP9.61□□□□□ -0.87
LDHB-208ENST00000539782 CCDC88AQ3V6T2 1871 aa9.61□□□□□ -0.87
LDHB-208ENST00000539782 NPC1L1Q9UHC9 1359 aa9.61□□□□□ -0.87
LDHB-208ENST00000539782 SIPA1L3O60292 1781 aaPredicted RBP9.6□□□□□ -0.87
LDHB-208ENST00000539782 FAM177BA6PVY3 158 aa9.6□□□□□ -0.87
LDHB-208ENST00000539782 SNRPA1P09661 255 aaKnown RBP9.6□□□□□ -0.87
LDHB-208ENST00000539782 NPR1P16066 1061 aa9.6□□□□□ -0.87
LDHB-208ENST00000539782 GTF2E1P29083 439 aaPredicted RBP9.6□□□□□ -0.87
LDHB-208ENST00000539782 PIP4K2AP48426 406 aaPredicted RBP9.6□□□□□ -0.87
LDHB-208ENST00000539782 CLEC4GQ6UXB4 293 aa9.6□□□□□ -0.87
LDHB-208ENST00000539782 AIDAQ96BJ3 306 aa9.6□□□□□ -0.87
LDHB-208ENST00000539782 CLEC11AQ9Y240 323 aa9.6□□□□□ -0.87
LDHB-208ENST00000539782 CEMIPQ8WUJ3 1361 aa9.6□□□□□ -0.87
LDHB-208ENST00000539782 BCORQ6W2J9 1755 aa9.6□□□□□ -0.87
LDHB-208ENST00000539782 CACNA1SQ13698 1873 aa9.59□□□□□ -0.87
LDHB-208ENST00000539782 FER1L6Q2WGJ9 1857 aa9.59□□□□□ -0.87
LDHB-208ENST00000539782 DICER1Q9UPY3 1922 aaKnown RBP9.59□□□□□ -0.87
LDHB-208ENST00000539782 KCNQ3O43525 872 aa9.59□□□□□ -0.87
LDHB-208ENST00000539782 NEFMP07197 916 aa9.59□□□□□ -0.87
LDHB-208ENST00000539782 U2AF1L5P0DN76 240 aaPredicted RBP9.59□□□□□ -0.87
LDHB-208ENST00000539782 U2AF1Q01081 240 aaKnown RBP eCLIP9.59□□□□□ -0.87
LDHB-208ENST00000539782 EAPPQ56P03 285 aaPredicted RBP9.59□□□□□ -0.87
LDHB-208ENST00000539782 TPTE2Q6XPS3 522 aa9.59□□□□□ -0.87
LDHB-208ENST00000539782 LDHDQ86WU2 507 aa9.59□□□□□ -0.87
LDHB-208ENST00000539782 NIP7Q9Y221 180 aaKnown RBP eCLIP9.59□□□□□ -0.87
LDHB-208ENST00000539782 USP16Q9Y5T5 823 aa9.59□□□□□ -0.87
LDHB-208ENST00000539782 ARFGEF2Q9Y6D5 1785 aa9.58□□□□□ -0.88
LDHB-208ENST00000539782 POTEIP0CG38 1075 aa9.58□□□□□ -0.88
LDHB-208ENST00000539782 POTEJP0CG39 1038 aa9.58□□□□□ -0.88
LDHB-208ENST00000539782 FKBP4Q02790 459 aaKnown RBP eCLIP9.58□□□□□ -0.88
LDHB-208ENST00000539782 MCM10Q7L590 875 aa9.58□□□□□ -0.88
LDHB-208ENST00000539782 RTKN2Q8IZC4 609 aa9.58□□□□□ -0.88
LDHB-208ENST00000539782 PHACTR3Q96KR7 559 aa9.58□□□□□ -0.88
LDHB-208ENST00000539782 RSPH6AQ9H0K4 717 aa9.58□□□□□ -0.88
LDHB-208ENST00000539782 ZNF277Q9NRM2 450 aaPredicted RBP9.58□□□□□ -0.88
LDHB-208ENST00000539782 HACL1Q9UJ83 578 aa9.58□□□□□ -0.88
LDHB-208ENST00000539782 SLX4Q8IY92 1834 aa9.57□□□□□ -0.88
LDHB-208ENST00000539782 L3MBTL3Q96JM7 780 aaPredicted RBP9.57□□□□□ -0.88
LDHB-208ENST00000539782 TAF1DQ9H5J8 278 aaPredicted RBP9.57□□□□□ -0.88
LDHB-208ENST00000539782 CNTNAP1P78357 1384 aa9.57□□□□□ -0.88
LDHB-208ENST00000539782 ZNF541Q9H0D2 1346 aa9.56□□□□□ -0.88
LDHB-208ENST00000539782 PRAMEF22A3QJZ6 481 aa9.56□□□□□ -0.88
LDHB-208ENST00000539782 TMEM88BA6NKF7 163 aa9.56□□□□□ -0.88
LDHB-208ENST00000539782 RGL2O15211 777 aa9.56□□□□□ -0.88
LDHB-208ENST00000539782 ALDH1B1P30837 517 aa9.56□□□□□ -0.88
LDHB-208ENST00000539782 PNMA8AQ86V59 439 aaPredicted RBP9.56□□□□□ -0.88
LDHB-208ENST00000539782 JDP2Q8WYK2 163 aa9.56□□□□□ -0.88
LDHB-208ENST00000539782 NYXQ9GZU5 481 aa9.56□□□□□ -0.88
LDHB-208ENST00000539782 SCN4AP35499 1836 aa9.55□□□□□ -0.88
LDHB-208ENST00000539782 LMOD1P29536 600 aaPredicted RBP9.55□□□□□ -0.88
LDHB-208ENST00000539782 EPHX2P34913 555 aa9.55□□□□□ -0.88
LDHB-208ENST00000539782 IARSP41252 1262 aaKnown RBP9.55□□□□□ -0.88
LDHB-208ENST00000539782 CTCFP49711 727 aaPredicted RBP9.55□□□□□ -0.88
LDHB-208ENST00000539782 DCTN1Q14203 1278 aa9.55□□□□□ -0.88
LDHB-208ENST00000539782 KIF6Q6ZMV9 814 aa9.55□□□□□ -0.88
LDHB-208ENST00000539782 NGEFQ8N5V2 710 aa9.55□□□□□ -0.88
LDHB-208ENST00000539782 RPGRQ92834 1020 aaKnown RBP9.55□□□□□ -0.88
LDHB-208ENST00000539782 RNF123Q5XPI4 1314 aa9.55□□□□□ -0.88
LDHB-208ENST00000539782 PASKQ96RG2 1323 aa9.55□□□□□ -0.88
LDHB-208ENST00000539782 KLRG2A4D1S0 409 aaPredicted RBP9.54□□□□□ -0.88
LDHB-208ENST00000539782 NBPF26B4DH59 902 aa9.54□□□□□ -0.88
LDHB-208ENST00000539782 FOXN1O15353 648 aa9.54□□□□□ -0.88
LDHB-208ENST00000539782 HTATSF1O43719 755 aaKnown RBP9.54□□□□□ -0.88
LDHB-208ENST00000539782 EIF6P56537 245 aaKnown RBP9.54□□□□□ -0.88
LDHB-208ENST00000539782 TAF7Q15545 349 aaPredicted RBP9.54□□□□□ -0.88
LDHB-208ENST00000539782 NBPF10Q6P3W6 841 aaKnown RBP9.54□□□□□ -0.88
LDHB-208ENST00000539782 OLFM4Q6UX06 510 aa9.54□□□□□ -0.88
LDHB-208ENST00000539782 SYNE4Q8N205 404 aa9.54□□□□□ -0.88
LDHB-208ENST00000539782 NBPF15Q8N660 670 aa9.54□□□□□ -0.88
LDHB-208ENST00000539782 PNISRQ8TF01 805 aaKnown RBP9.54□□□□□ -0.88
LDHB-208ENST00000539782 C7orf43Q8WVR3 580 aa9.54□□□□□ -0.88
LDHB-208ENST00000539782 TMX4Q9H1E5 349 aaPredicted RBP9.54□□□□□ -0.88
LDHB-208ENST00000539782 PRDM10Q9NQV6 1147 aa9.54□□□□□ -0.88
LDHB-208ENST00000539782 ABT1Q9ULW3 272 aaKnown RBP9.54□□□□□ -0.88
LDHB-208ENST00000539782 GJA3Q9Y6H8 435 aa9.54□□□□□ -0.88
LDHB-208ENST00000539782 PPP2R1AP30153 589 aa9.53□□□□□ -0.88
LDHB-208ENST00000539782 VEGFBP49765 207 aa9.53□□□□□ -0.88
LDHB-208ENST00000539782 HLFQ16534 295 aa9.53□□□□□ -0.88
LDHB-208ENST00000539782 MAP1SQ66K74 1059 aaPredicted RBP9.53□□□□□ -0.88
LDHB-208ENST00000539782 CC2D2BQ6DHV5 1058 aa9.53□□□□□ -0.88
LDHB-208ENST00000539782 PAXIP1Q6ZW49 1069 aaPredicted RBP9.53□□□□□ -0.88
LDHB-208ENST00000539782 GPC2Q8N158 579 aa9.53□□□□□ -0.88
LDHB-208ENST00000539782 LAMB4A4D0S4 1761 aa9.52□□□□□ -0.88
LDHB-208ENST00000539782 FZD9O00144 591 aa9.52□□□□□ -0.89
LDHB-208ENST00000539782 DEFB115Q30KQ5 88 aa9.52□□□□□ -0.89
LDHB-208ENST00000539782 NUTM1Q86Y26 1132 aa9.52□□□□□ -0.89
LDHB-208ENST00000539782 CNTROBQ8N137 903 aa9.52□□□□□ -0.89
LDHB-208ENST00000539782 LARGE2Q8N3Y3 721 aa9.52□□□□□ -0.89
LDHB-208ENST00000539782 RBM17Q96I25 401 aaKnown RBP9.52□□□□□ -0.89
LDHB-208ENST00000539782 PSMD1Q99460 953 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms