RNA–Protein interactions for RNA: ENST00000539517.6

NOVA1-206, Transcript of NOVA alternative splicing regulator 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NOVA1, Length 3,912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOVA1-206ENST00000539517 FMNL2Q96PY5 1086 aa7.52□□□□□ -1.21
NOVA1-206ENST00000539517 KDM6AO15550 1401 aaPredicted RBP7.52□□□□□ -1.21
NOVA1-206ENST00000539517 SOS2Q07890 1332 aaPredicted RBP7.52□□□□□ -1.21
NOVA1-206ENST00000539517 A0A087WZG4 1122 aa7.52□□□□□ -1.21
NOVA1-206ENST00000539517 NBPF26B4DH59 902 aa7.52□□□□□ -1.21
NOVA1-206ENST00000539517 GPTP24298 496 aa7.52□□□□□ -1.21
NOVA1-206ENST00000539517 NBPF14Q5TI25 921 aa7.52□□□□□ -1.21
NOVA1-206ENST00000539517 NBPF10Q6P3W6 841 aaKnown RBP7.52□□□□□ -1.21
NOVA1-206ENST00000539517 NBPF15Q8N660 670 aa7.52□□□□□ -1.21
NOVA1-206ENST00000539517 EDC3Q96F86 508 aaKnown RBP7.52□□□□□ -1.21
NOVA1-206ENST00000539517 RGPD1P0DJD0 1748 aa7.52□□□□□ -1.21
NOVA1-206ENST00000539517 GRM8O00222 908 aa7.52□□□□□ -1.21
NOVA1-206ENST00000539517 CHGBP05060 677 aa7.52□□□□□ -1.21
NOVA1-206ENST00000539517 PRKCSHP14314 528 aaPredicted RBP7.52□□□□□ -1.21
NOVA1-206ENST00000539517 NEXNQ0ZGT2 675 aa7.52□□□□□ -1.21
NOVA1-206ENST00000539517 KAZALD1Q96I82 304 aa7.52□□□□□ -1.21
NOVA1-206ENST00000539517 HYPKQ9NX55 129 aa7.52□□□□□ -1.21
NOVA1-206ENST00000539517 HSP90AB1P08238 724 aaKnown RBP7.51□□□□□ -1.21
NOVA1-206ENST00000539517 FOXD4L6Q3SYB3 417 aaPredicted RBP7.51□□□□□ -1.21
NOVA1-206ENST00000539517 CWC27Q6UX04 472 aaKnown RBP7.51□□□□□ -1.21
NOVA1-206ENST00000539517 FOXD4L3Q6VB84 417 aaPredicted RBP7.51□□□□□ -1.21
NOVA1-206ENST00000539517 HSCBQ8IWL3 235 aa7.51□□□□□ -1.21
NOVA1-206ENST00000539517 UPF3BQ9BZI7 483 aaKnown RBP7.51□□□□□ -1.21
NOVA1-206ENST00000539517 RGPD5Q99666 1765 aa7.51□□□□□ -1.21
NOVA1-206ENST00000539517 DDX58O95786 925 aaKnown RBP7.51□□□□□ -1.21
NOVA1-206ENST00000539517 DNAJC10Q8IXB1 793 aa7.51□□□□□ -1.21
NOVA1-206ENST00000539517 TLR7Q9NYK1 1049 aaKnown RBP7.51□□□□□ -1.21
NOVA1-206ENST00000539517 COL24A1Q17RW2 1714 aa7.51□□□□□ -1.21
NOVA1-206ENST00000539517 AACSQ86V21 672 aa7.51□□□□□ -1.21
NOVA1-206ENST00000539517 CHAMP1Q96JM3 812 aa7.51□□□□□ -1.21
NOVA1-206ENST00000539517 KIF2CQ99661 725 aa7.51□□□□□ -1.21
NOVA1-206ENST00000539517 TMOD3Q9NYL9 352 aa7.51□□□□□ -1.21
NOVA1-206ENST00000539517 PRIM1P49642 420 aaKnown RBP7.5□□□□□ -1.21
NOVA1-206ENST00000539517 PIGBQ92521 554 aa7.5□□□□□ -1.21
NOVA1-206ENST00000539517 BOLA2Q9H3K6 86 aa7.5□□□□□ -1.21
NOVA1-206ENST00000539517 LINS1Q8NG48 757 aa7.5□□□□□ -1.21
NOVA1-206ENST00000539517 SSH3Q8TE77 659 aa7.5□□□□□ -1.21
NOVA1-206ENST00000539517 ZNF594Q96JF6 807 aaPredicted RBP7.5□□□□□ -1.21
NOVA1-206ENST00000539517 TBC1D2BQ9UPU7 963 aa7.5□□□□□ -1.21
NOVA1-206ENST00000539517 BABAM1Q9NWV8 329 aa7.5□□□□□ -1.21
NOVA1-206ENST00000539517 CAMTA1Q9Y6Y1 1673 aa7.5□□□□□ -1.21
NOVA1-206ENST00000539517 NEURL1BA8MQ27 555 aa7.49□□□□□ -1.21
NOVA1-206ENST00000539517 GCKRQ14397 625 aa7.49□□□□□ -1.21
NOVA1-206ENST00000539517 SLFNL1Q499Z3 407 aa7.49□□□□□ -1.21
NOVA1-206ENST00000539517 FAM89AQ96GI7 184 aa7.49□□□□□ -1.21
NOVA1-206ENST00000539517 IFIT2P09913 472 aaKnown RBP7.49□□□□□ -1.21
NOVA1-206ENST00000539517 CPA1P15085 419 aa7.49□□□□□ -1.21
NOVA1-206ENST00000539517 G3BP1Q13283 466 aaKnown RBP eCLIP7.49□□□□□ -1.21
NOVA1-206ENST00000539517 LMBR1LQ6UX01 489 aa7.49□□□□□ -1.21
NOVA1-206ENST00000539517 CLASRPQ8N2M8 674 aaKnown RBP7.49□□□□□ -1.21
NOVA1-206ENST00000539517 PALD1Q9ULE6 856 aa7.49□□□□□ -1.21
NOVA1-206ENST00000539517 EAF2Q96CJ1 260 aaPredicted RBP7.49□□□□□ -1.21
NOVA1-206ENST00000539517 NEUROD6Q96NK8 337 aa7.49□□□□□ -1.21
NOVA1-206ENST00000539517 USP26Q9BXU7 913 aa7.49□□□□□ -1.21
NOVA1-206ENST00000539517 EXOC5O00471 708 aa7.48□□□□□ -1.21
NOVA1-206ENST00000539517 NEK4P51957 841 aa7.48□□□□□ -1.21
NOVA1-206ENST00000539517 CASC1Q6TDU7 716 aa7.48□□□□□ -1.21
NOVA1-206ENST00000539517 C8orf37Q96NL8 207 aa7.48□□□□□ -1.21
NOVA1-206ENST00000539517 CARD10Q9BWT7 1032 aa7.48□□□□□ -1.21
NOVA1-206ENST00000539517 NCOA3Q9Y6Q9 1424 aa7.48□□□□□ -1.21
NOVA1-206ENST00000539517 SASH1O94885 1247 aa7.48□□□□□ -1.21
NOVA1-206ENST00000539517 HOXB7P09629 217 aa7.48□□□□□ -1.21
NOVA1-206ENST00000539517 KIF1BPQ96EK5 621 aa7.48□□□□□ -1.21
NOVA1-206ENST00000539517 PCDH11XQ9BZA7 1347 aa7.48□□□□□ -1.21
NOVA1-206ENST00000539517 PCDH11YQ9BZA8 1340 aa7.48□□□□□ -1.21
NOVA1-206ENST00000539517 IBTKQ9P2D0 1353 aaPredicted RBP7.48□□□□□ -1.21
NOVA1-206ENST00000539517 KCNQ2O43526 872 aa7.48□□□□□ -1.21
NOVA1-206ENST00000539517 TIMM10P62072 90 aa7.48□□□□□ -1.21
NOVA1-206ENST00000539517 METTL22Q9BUU2 404 aaPredicted RBP7.48□□□□□ -1.21
NOVA1-206ENST00000539517 UBAP1LF5GYI3 381 aa7.47□□□□□ -1.21
NOVA1-206ENST00000539517 PKP1Q13835 747 aa7.47□□□□□ -1.21
NOVA1-206ENST00000539517 PTF1AQ7RTS3 328 aa7.47□□□□□ -1.21
NOVA1-206ENST00000539517 DNAJC2Q99543 621 aaKnown RBP7.47□□□□□ -1.21
NOVA1-206ENST00000539517 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.47□□□□□ -1.21
NOVA1-206ENST00000539517 ERC2O15083 957 aa7.47□□□□□ -1.21
NOVA1-206ENST00000539517 CHMLP26374 656 aa7.47□□□□□ -1.21
NOVA1-206ENST00000539517 FAM98CQ17RN3 349 aaKnown RBP7.47□□□□□ -1.21
NOVA1-206ENST00000539517 ZGPATQ8N5A5 531 aaKnown RBP7.47□□□□□ -1.21
NOVA1-206ENST00000539517 TCEANC2Q96MN5 208 aa7.47□□□□□ -1.21
NOVA1-206ENST00000539517 TRPM3Q9HCF6 1732 aaPredicted RBP7.47□□□□□ -1.21
NOVA1-206ENST00000539517 RBM25P49756 843 aaKnown RBP7.46□□□□□ -1.21
NOVA1-206ENST00000539517 TFCP2Q12800 502 aa7.46□□□□□ -1.21
NOVA1-206ENST00000539517 HLFQ16534 295 aa7.46□□□□□ -1.21
NOVA1-206ENST00000539517 LRP10Q7Z4F1 713 aa7.46□□□□□ -1.21
NOVA1-206ENST00000539517 NGLY1Q96IV0 654 aa7.46□□□□□ -1.21
NOVA1-206ENST00000539517 SLC4A9Q96Q91 983 aa7.46□□□□□ -1.21
NOVA1-206ENST00000539517 PUS3Q9BZE2 481 aaKnown RBP7.46□□□□□ -1.21
NOVA1-206ENST00000539517 ANTXR1Q9H6X2 564 aa7.46□□□□□ -1.21
NOVA1-206ENST00000539517 ATG3Q9NT62 314 aa7.46□□□□□ -1.21
NOVA1-206ENST00000539517 TAOK2Q9UL54 1235 aa7.46□□□□□ -1.21
NOVA1-206ENST00000539517 SLIT3O75094 1523 aa7.46□□□□□ -1.22
NOVA1-206ENST00000539517 SNAP23O00161 211 aa7.46□□□□□ -1.22
NOVA1-206ENST00000539517 COL9A3Q14050 684 aaPredicted RBP7.46□□□□□ -1.22
NOVA1-206ENST00000539517 FAM227BQ96M60 508 aa7.46□□□□□ -1.22
NOVA1-206ENST00000539517 RGPD3A6NKT7 1758 aaPredicted RBP7.46□□□□□ -1.22
NOVA1-206ENST00000539517 RGPD4Q7Z3J3 1758 aa7.46□□□□□ -1.22
NOVA1-206ENST00000539517 ALDH1L1O75891 902 aa7.46□□□□□ -1.22
NOVA1-206ENST00000539517 LRRC24Q50LG9 513 aa7.46□□□□□ -1.22
NOVA1-206ENST00000539517 CCDC24Q8N4L8 307 aa7.46□□□□□ -1.22
NOVA1-206ENST00000539517 PI4K2BQ8TCG2 481 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms